RNA–Protein interactions for RNA: ENSMUST00000086483.3

Ccdc60-202, Transcript of Coiled-coil domain-containing protein 60, mousemouse

TSL 1 (best) BASIC

Gene Ccdc60, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-202ENSMUST00000086483 Sh3bp5lQ99LH9 392 aa13.77□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Nup98Q6PFD9 1816 aaKnown RBP13.77□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Znfx1Q8R151 1909 aaKnown RBP13.77□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Casp1P29452 402 aa13.76□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Aplp1Q03157 653 aa13.76□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Mapk4Q6P5G0 583 aa13.76□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 NrdcQ8BHG1 1161 aa13.76□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Atxn3Q9CVD2 355 aa13.76□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Zgrf1Q0VGT4 1863 aa13.76□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Gm13128L7MU96 475 aa13.76□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 VgfQ0VGU4 617 aa13.76□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Ddx55Q6ZPL9 600 aaKnown RBP13.76□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Ttc7aQ8BGB2 858 aa13.76□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Mast3Q3U214 1321 aa13.76□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Pitpnm2Q6ZPQ6 1335 aa13.76□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Cfap44E9Q5M6 1843 aa13.75□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Bend3Q6PAL0 825 aa13.75□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Mxd3Q80US8 206 aa13.75□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Spata21Q8BHW6 681 aa13.75□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Slc44a4Q91VA1 707 aa13.75□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Il21rQ9JHX3 529 aa13.75□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Prss51A0A286YDY8 319 aa13.75□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Phldb3E9QAF4 648 aa13.75□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Nck2O55033 380 aa13.75□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Grm8P47743 908 aa13.75□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Amer2Q8CCJ4 672 aa13.75□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Ero1bQ8R2E9 467 aa13.75□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 ParvgQ9ERD8 331 aa13.75□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Irx5Q9JKQ4 484 aa13.75□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Spg7Q3ULF4 781 aa13.74□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Fam205cQ80YD3 371 aa13.74□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Rhbdl3P58873 404 aa13.73□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 SpidrQ8BGX7 933 aa13.73□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Sh3bp5Q9Z131 463 aa13.73□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Prl3d2F6R3P9 224 aa13.73□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Vamp4O70480 141 aa13.73□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Cfdp1O88271 295 aaKnown RBP13.73□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Gpr182P43142 395 aa13.73□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 CrkQ64010 304 aa13.73□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Wwc2Q6NXJ0 1187 aa13.73□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Zbtb9Q8CDC7 459 aa13.73□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 PpatQ8CIH9 517 aa13.73□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Hoxd10P28359 340 aa13.72□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Cbx2P30658 519 aa13.72□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Zap70P43404 618 aa13.72□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Irx3P81067 507 aa13.72□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Gxylt1Q3UHH8 404 aa13.72□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Gm11437Q5QR91 290 aa13.72□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Eif3aP23116 1344 aaKnown RBP13.72□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Npc1l1Q6T3U4 1333 aa13.72□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Fzd1O70421 642 aa13.72□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Map3k13Q1HKZ5 959 aa13.72□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Plbd2Q3TCN2 594 aa13.72□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Rnf208Q8K0W3 265 aa13.72□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Exoc6Q8R313 802 aa13.72□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Pdzrn4E9PUZ9 1014 aa13.71□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Anxa1P10107 346 aaKnown RBP13.71□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Gm5592Q3V0A6 857 aa13.71□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Itgbl1Q8VDV0 494 aa13.71□□□□□ -0.21
Ccdc60-202ENSMUST00000086483 Skor2A7M7C7 1008 aa13.71□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Fdx1P46656 188 aa13.71□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Mbtps2Q8CHX6 515 aa13.71□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Ptcd2Q8R3K3 381 aaKnown RBP13.71□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 MyocdQ8VIM5 935 aa13.71□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Prkag2Q91WG5 566 aa13.71□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 KarsQ99MN1 595 aaKnown RBP13.71□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Rgs12Q8CGE9 1381 aa13.7□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Cfap99A0A140LIX9 648 aa13.7□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Lgr6Q3UVD5 967 aa13.7□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Gba2Q69ZF3 918 aa13.7□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Krt74Q6IFZ9 495 aa13.7□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Pcdhb5Q91XZ5 792 aa13.7□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Magea4F2Z493 315 aa13.69□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Otud5Q3U2S4 566 aa13.69□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Fbxo3Q9DC63 480 aa13.69□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Gm6268A2A3U9 297 aa13.69□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Irf5P56477 497 aa13.69□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 GpkowQ56A08 488 aa13.69□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Lca5lQ8C0X0 741 aa13.69□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Ccar1Q8CH18 1146 aaKnown RBP13.69□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Stag1Q9D3E6 1258 aa13.69□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Slc4a2P13808 1237 aaKnown RBP13.68□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 CnpP16330 420 aa13.68□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Klrg2Q3UM83 387 aa13.68□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Ralbp1Q62172 648 aa13.68□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Tmc4Q7TQ65 694 aa13.68□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Tmem39bQ810L4 492 aa13.68□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Phf20Q8BLG0 1010 aaKnown RBP13.68□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 C8aQ8K182 587 aa13.68□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Leng1Q9DB98 261 aa13.68□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 SynrgQ5SV85 1306 aa13.68□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Krt28A6BLY7 462 aa13.68□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Ftl2P49945 183 aa13.68□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Plekhf1Q3TB82 279 aa13.68□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Map3k12Q60700 888 aa13.68□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Lrrc24Q8BHA1 521 aa13.68□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Syne4Q8CII8 388 aa13.68□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Ncor1Q60974 2453 aa13.67□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 Bcorl1A2AQH4 1781 aa13.67□□□□□ -0.22
Ccdc60-202ENSMUST00000086483 PrkcshO08795 521 aa13.67□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms