Protein–RNA interactions for Protein: Q8R3K3

Ptcd2, Pentatricopeptide repeat-containing protein 2, mitochondrial, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd2Q8R3K3 Gm25239-201ENSMUST00000174915 86 ntBASIC43.76■■■■■ 4.6
Ptcd2Q8R3K3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.88■■■■■ 4.13
Ptcd2Q8R3K3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC40.31■■■■■ 4.04
Ptcd2Q8R3K3 Gm24109-201ENSMUST00000175489 103 ntBASIC38.41■■■■□ 3.74
Ptcd2Q8R3K3 Gm15042-201ENSMUST00000120212 883 ntBASIC37.33■■■■□ 3.57
Ptcd2Q8R3K3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC37.24■■■■□ 3.55
Ptcd2Q8R3K3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC37.05■■■■□ 3.52
Ptcd2Q8R3K3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
Ptcd2Q8R3K3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC36.58■■■■□ 3.45
Ptcd2Q8R3K3 Gm23366-201ENSMUST00000175022 89 ntBASIC36.48■■■■□ 3.43
Ptcd2Q8R3K3 Gm15045-201ENSMUST00000117359 883 ntBASIC36.29■■■■□ 3.4
Ptcd2Q8R3K3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC36.11■■■■□ 3.37
Ptcd2Q8R3K3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
Ptcd2Q8R3K3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
Ptcd2Q8R3K3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC35.89■■■■□ 3.34
Ptcd2Q8R3K3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC35.58■■■■□ 3.29
Ptcd2Q8R3K3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC35.06■■■■□ 3.2
Ptcd2Q8R3K3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
Ptcd2Q8R3K3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
Ptcd2Q8R3K3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
Ptcd2Q8R3K3 Gm25238-201ENSMUST00000174914 89 ntBASIC34.82■■■■□ 3.16
Ptcd2Q8R3K3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.74■■■■□ 3.15
Ptcd2Q8R3K3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC34.24■■■■□ 3.07
Ptcd2Q8R3K3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC34.16■■■■□ 3.06
Ptcd2Q8R3K3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC34.15■■■■□ 3.06
Ptcd2Q8R3K3 Gm25262-201ENSMUST00000174934 133 ntBASIC33.95■■■■□ 3.03
Ptcd2Q8R3K3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.74■■■□□ 2.99
Ptcd2Q8R3K3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC33.7■■■□□ 2.99
Ptcd2Q8R3K3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC33.62■■■□□ 2.97
Ptcd2Q8R3K3 Gm26115-201ENSMUST00000175605 87 ntBASIC33.5■■■□□ 2.95
Ptcd2Q8R3K3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC33.42■■■□□ 2.94
Ptcd2Q8R3K3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.4■■■□□ 2.94
Ptcd2Q8R3K3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
Ptcd2Q8R3K3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
Ptcd2Q8R3K3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC33.14■■■□□ 2.9
Ptcd2Q8R3K3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33.14■■■□□ 2.9
Ptcd2Q8R3K3 Gm8109-201ENSMUST00000194076 746 ntBASIC33.08■■■□□ 2.89
Ptcd2Q8R3K3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Ptcd2Q8R3K3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Ptcd2Q8R3K3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Ptcd2Q8R3K3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Ptcd2Q8R3K3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
Ptcd2Q8R3K3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.67■■■□□ 2.82
Ptcd2Q8R3K3 Rab21-202ENSMUST00000218831 843 ntBASIC32.63■■■□□ 2.81
Ptcd2Q8R3K3 Gm27325-201ENSMUST00000175467 74 ntBASIC32.56■■■□□ 2.8
Ptcd2Q8R3K3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Ptcd2Q8R3K3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Ptcd2Q8R3K3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC32.49■■■□□ 2.79
Ptcd2Q8R3K3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Ptcd2Q8R3K3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32.26■■■□□ 2.75
Ptcd2Q8R3K3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Ptcd2Q8R3K3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.2■■■□□ 2.74
Ptcd2Q8R3K3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.2■■■□□ 2.74
Ptcd2Q8R3K3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.08■■■□□ 2.73
Ptcd2Q8R3K3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
Ptcd2Q8R3K3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.05■■■□□ 2.72
Ptcd2Q8R3K3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC32■■■□□ 2.71
Ptcd2Q8R3K3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.99■■■□□ 2.71
Ptcd2Q8R3K3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Ptcd2Q8R3K3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Ptcd2Q8R3K3 Gm24804-201ENSMUST00000174982 85 ntBASIC31.95■■■□□ 2.71
Ptcd2Q8R3K3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Ptcd2Q8R3K3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.92■■■□□ 2.7
Ptcd2Q8R3K3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Ptcd2Q8R3K3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Ptcd2Q8R3K3 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.68■■■□□ 2.66
Ptcd2Q8R3K3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Ptcd2Q8R3K3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Ptcd2Q8R3K3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31.5■■■□□ 2.63
Ptcd2Q8R3K3 Zfp131-205ENSMUST00000223812 663 ntBASIC31.49■■■□□ 2.63
Ptcd2Q8R3K3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Ptcd2Q8R3K3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
Ptcd2Q8R3K3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Ptcd2Q8R3K3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC31.44■■■□□ 2.62
Ptcd2Q8R3K3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC31.39■■■□□ 2.62
Ptcd2Q8R3K3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.61
Ptcd2Q8R3K3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.38■■■□□ 2.61
Ptcd2Q8R3K3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Ptcd2Q8R3K3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Ptcd2Q8R3K3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
Ptcd2Q8R3K3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Ptcd2Q8R3K3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Ptcd2Q8R3K3 Gm27322-201ENSMUST00000184007 104 ntBASIC31.3■■■□□ 2.6
Ptcd2Q8R3K3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Ptcd2Q8R3K3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Ptcd2Q8R3K3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Ptcd2Q8R3K3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.22■■■□□ 2.59
Ptcd2Q8R3K3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC31.14■■■□□ 2.58
Ptcd2Q8R3K3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Ptcd2Q8R3K3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.56
Ptcd2Q8R3K3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Ptcd2Q8R3K3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ptcd2Q8R3K3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Ptcd2Q8R3K3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Ptcd2Q8R3K3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.92■■■□□ 2.54
Ptcd2Q8R3K3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.9■■■□□ 2.54
Ptcd2Q8R3K3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.9■■■□□ 2.54
Ptcd2Q8R3K3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Ptcd2Q8R3K3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30.84■■■□□ 2.53
Ptcd2Q8R3K3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30.83■■■□□ 2.53
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms