RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Actbl2Q8BFZ3 376 aa10.71□□□□□ -0.69
Pcif1-201ENSMUST00000041643 Lysmd4Q8CC84 293 aa10.71□□□□□ -0.69
Pcif1-201ENSMUST00000041643 Vmn1r229Q8R2A9 306 aa10.71□□□□□ -0.69
Pcif1-201ENSMUST00000041643 CdiptQ8VDP6 213 aa10.71□□□□□ -0.69
Pcif1-201ENSMUST00000041643 Izumo1rQ9EQF4 244 aa10.71□□□□□ -0.69
Pcif1-201ENSMUST00000041643 Sorcs1Q9JLC4 1167 aa10.71□□□□□ -0.69
Pcif1-201ENSMUST00000041643 Gm15013V9GWY0 266 aa10.71□□□□□ -0.69
Pcif1-201ENSMUST00000041643 CN725425A0A087WRU1 652 aa10.71□□□□□ -0.69
Pcif1-201ENSMUST00000041643 Esp16A8R0U9 85 aa10.71□□□□□ -0.69
Pcif1-201ENSMUST00000041643 Tgfbr3O88393 850 aa10.71□□□□□ -0.69
Pcif1-201ENSMUST00000041643 P01804 111 aa10.71□□□□□ -0.69
Pcif1-201ENSMUST00000041643 Bcl2P10417 236 aa10.71□□□□□ -0.69
Pcif1-201ENSMUST00000041643 P2rx1P51576 399 aa10.71□□□□□ -0.69
Pcif1-201ENSMUST00000041643 Fbxw22Q5XG67 466 aa10.71□□□□□ -0.69
Pcif1-201ENSMUST00000041643 HpQ61646 347 aa10.71□□□□□ -0.69
Pcif1-201ENSMUST00000041643 Fam76bQ80XP8 339 aa10.71□□□□□ -0.69
Pcif1-201ENSMUST00000041643 Cd99l2Q8BIF0 237 aa10.71□□□□□ -0.69
Pcif1-201ENSMUST00000041643 Adamts4Q8BNJ2 833 aa10.71□□□□□ -0.69
Pcif1-201ENSMUST00000041643 Wdr37Q8CBE3 496 aa10.71□□□□□ -0.69
Pcif1-201ENSMUST00000041643 Olfr1389Q8VGX0 311 aa10.71□□□□□ -0.69
Pcif1-201ENSMUST00000041643 Pdzk1ip1Q9CQH0 114 aa10.71□□□□□ -0.69
Pcif1-201ENSMUST00000041643 Dmac2Q9D7K5 258 aaKnown RBP10.71□□□□□ -0.69
Pcif1-201ENSMUST00000041643 Syt7Q9R0N7 403 aa10.71□□□□□ -0.69
Pcif1-201ENSMUST00000041643 Psmb3Q9R1P1 205 aa10.71□□□□□ -0.69
Pcif1-201ENSMUST00000041643 Olfr1129A2AV41 314 aa10.71□□□□□ -0.7
Pcif1-201ENSMUST00000041643 PpiaP17742 164 aaKnown RBP10.71□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Fcer1aP20489 250 aa10.71□□□□□ -0.7
Pcif1-201ENSMUST00000041643 FstP47931 344 aa10.71□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Limk1P53668 647 aa10.71□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Cdk5r1P61809 307 aa10.71□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Il11ra1Q64385 432 aa10.71□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Glb1lQ8VC60 646 aa10.71□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Olfr780Q8VEU0 312 aa10.71□□□□□ -0.7
Pcif1-201ENSMUST00000041643 NrarpQ91ZA8 114 aa10.71□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Cd209cQ91ZW9 178 aa10.71□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Mrpl54Q9CPW3 135 aa10.71□□□□□ -0.7
Pcif1-201ENSMUST00000041643 GrinaQ9ESF4 345 aa10.71□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Rhox2fA2ANE0 191 aa10.71□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Adap1E9PY16 374 aa10.71□□□□□ -0.7
Pcif1-201ENSMUST00000041643 AF067061O70616 171 aa10.71□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Zfp235Q499D5 702 aa10.71□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Fkbp10Q61576 581 aa10.71□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Fam234bQ8BYI8 624 aa10.71□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Rrnad1Q8BZG5 475 aa10.71□□□□□ -0.7
Pcif1-201ENSMUST00000041643 FarsaQ8C0C7 508 aa10.71□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Rps19bp1Q8C6B9 143 aaKnown RBP10.71□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Atxn7l2Q8C8K6 696 aa10.71□□□□□ -0.7
Pcif1-201ENSMUST00000041643 CcnqQ8QZR8 250 aa10.71□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Vmn1r59Q8R2B9 310 aa10.71□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Syt9Q9R0N9 491 aa10.71□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Dctn6Q9WUB4 190 aa10.71□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Prrt1O35449 306 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Pax7P47239 503 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Idh3gP70404 393 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Dll1Q61483 722 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Krt33bQ61897 404 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 DpcdQ8BPA8 203 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Vmn1r21Q8R2C6 297 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Thap7Q8VCZ3 309 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Vmn1r51Q8VIC6 319 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Slc35b3Q922Q5 369 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 B3gat1Q9CW73 334 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Cnih4Q9CX13 139 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Actl11Q9D5V1 1207 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Tprg1lQ9DBS2 266 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Gm21833J3QPK1 500 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Cd79aP11911 220 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Apoc3P33622 99 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Elk1P41969 429 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Wdr34Q5U4F6 535 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Foxl1Q64731 336 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Pik3ip1Q7TMJ8 264 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Olfr1299Q7TQX5 312 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Olfr1087Q7TR63 313 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Arf2Q8BSL7 181 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Olfr133Q8VG94 312 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Prl8a9Q9CQ58 241 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Tspan31Q9CQ88 210 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Sdf2Q9DCT5 211 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Elp4Q9ER73 422 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Pcdh1F7BJK1 1077 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Vmn1r34G3XA52 309 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 NppaP05125 152 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Cnr1P47746 473 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Hsd17b8P50171 259 aaKnown RBP10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Rhox10Q4TU83 196 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Mrgpra3Q91WW3 302 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Washc3Q9CR27 194 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Mbd2Q9Z2E1 414 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 4930402F06RikA2AUQ8 332 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Gm10376D3YXI8 184 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Gm4181E9Q7X3 184 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Oosp3G5E8D7 195 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Gm10375L7N286 184 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 UbbP0CG49 305 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Clk1P22518 483 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 SgcaP82350 387 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Tex52Q3TTI8 308 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Muc20Q8BUE7 656 aa10.7□□□□□ -0.7
Pcif1-201ENSMUST00000041643 Ssxb2Q8C5Z3 165 aa10.7□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms