Protein–RNA interactions for Protein: Q8R2A9

Vmn1r229, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r229Q8R2A9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Vmn1r229Q8R2A9 Gm25239-201ENSMUST00000174915 86 ntBASIC27.89■■■□□ 2.06
Vmn1r229Q8R2A9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27.7■■■□□ 2.02
Vmn1r229Q8R2A9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Vmn1r229Q8R2A9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Vmn1r229Q8R2A9 Psd-208ENSMUST00000224556 2034 ntBASIC27.12■■□□□ 1.93
Vmn1r229Q8R2A9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Vmn1r229Q8R2A9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Vmn1r229Q8R2A9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
Vmn1r229Q8R2A9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Vmn1r229Q8R2A9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Vmn1r229Q8R2A9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Vmn1r229Q8R2A9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Vmn1r229Q8R2A9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Vmn1r229Q8R2A9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Vmn1r229Q8R2A9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Vmn1r229Q8R2A9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Vmn1r229Q8R2A9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
Vmn1r229Q8R2A9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Vmn1r229Q8R2A9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Vmn1r229Q8R2A9 Gm15042-201ENSMUST00000120212 883 ntBASIC24.97■■□□□ 1.59
Vmn1r229Q8R2A9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Vmn1r229Q8R2A9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24.85■■□□□ 1.57
Vmn1r229Q8R2A9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Vmn1r229Q8R2A9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Vmn1r229Q8R2A9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Vmn1r229Q8R2A9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Vmn1r229Q8R2A9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Vmn1r229Q8R2A9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Vmn1r229Q8R2A9 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.61■■□□□ 1.53
Vmn1r229Q8R2A9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Vmn1r229Q8R2A9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.58■■□□□ 1.52
Vmn1r229Q8R2A9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.52■■□□□ 1.52
Vmn1r229Q8R2A9 Gm15045-201ENSMUST00000117359 883 ntBASIC24.49■■□□□ 1.51
Vmn1r229Q8R2A9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Vmn1r229Q8R2A9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Vmn1r229Q8R2A9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.32■■□□□ 1.48
Vmn1r229Q8R2A9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Vmn1r229Q8R2A9 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.19■■□□□ 1.46
Vmn1r229Q8R2A9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Vmn1r229Q8R2A9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
Vmn1r229Q8R2A9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Vmn1r229Q8R2A9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Vmn1r229Q8R2A9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Vmn1r229Q8R2A9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Vmn1r229Q8R2A9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.04■■□□□ 1.44
Vmn1r229Q8R2A9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Vmn1r229Q8R2A9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Vmn1r229Q8R2A9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Vmn1r229Q8R2A9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
Vmn1r229Q8R2A9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23.94■■□□□ 1.42
Vmn1r229Q8R2A9 Gm24109-201ENSMUST00000175489 103 ntBASIC23.87■■□□□ 1.41
Vmn1r229Q8R2A9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Vmn1r229Q8R2A9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Vmn1r229Q8R2A9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Vmn1r229Q8R2A9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Vmn1r229Q8R2A9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Vmn1r229Q8R2A9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.65■■□□□ 1.38
Vmn1r229Q8R2A9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Vmn1r229Q8R2A9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Vmn1r229Q8R2A9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Vmn1r229Q8R2A9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Vmn1r229Q8R2A9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Vmn1r229Q8R2A9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Vmn1r229Q8R2A9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Vmn1r229Q8R2A9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Vmn1r229Q8R2A9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Vmn1r229Q8R2A9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Vmn1r229Q8R2A9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Vmn1r229Q8R2A9 Gm23366-201ENSMUST00000175022 89 ntBASIC23.38■■□□□ 1.33
Vmn1r229Q8R2A9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Vmn1r229Q8R2A9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Vmn1r229Q8R2A9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Vmn1r229Q8R2A9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Vmn1r229Q8R2A9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Vmn1r229Q8R2A9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Vmn1r229Q8R2A9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.28■■□□□ 1.32
Vmn1r229Q8R2A9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Vmn1r229Q8R2A9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Vmn1r229Q8R2A9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.23■■□□□ 1.31
Vmn1r229Q8R2A9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Vmn1r229Q8R2A9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Vmn1r229Q8R2A9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Vmn1r229Q8R2A9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Vmn1r229Q8R2A9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.13■■□□□ 1.29
Vmn1r229Q8R2A9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Vmn1r229Q8R2A9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Vmn1r229Q8R2A9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Vmn1r229Q8R2A9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Vmn1r229Q8R2A9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Vmn1r229Q8R2A9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Vmn1r229Q8R2A9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.05■■□□□ 1.28
Vmn1r229Q8R2A9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Vmn1r229Q8R2A9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Vmn1r229Q8R2A9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Vmn1r229Q8R2A9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22.96■■□□□ 1.27
Vmn1r229Q8R2A9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Vmn1r229Q8R2A9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Vmn1r229Q8R2A9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Vmn1r229Q8R2A9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms