Protein–RNA interactions for Protein: J3QPK1

Gm21833, Predicted gene, 21833, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21833J3QPK1 Gm25239-201ENSMUST00000174915 86 ntBASIC30.09■■■□□ 2.41
Gm21833J3QPK1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Gm21833J3QPK1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Gm21833J3QPK1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Gm21833J3QPK1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
Gm21833J3QPK1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Gm21833J3QPK1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Gm21833J3QPK1 Psd-208ENSMUST00000224556 2034 ntBASIC27.43■■□□□ 1.98
Gm21833J3QPK1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Gm21833J3QPK1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Gm21833J3QPK1 Gm15042-201ENSMUST00000120212 883 ntBASIC26.99■■□□□ 1.91
Gm21833J3QPK1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Gm21833J3QPK1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Gm21833J3QPK1 Gm15045-201ENSMUST00000117359 883 ntBASIC26.48■■□□□ 1.83
Gm21833J3QPK1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.45■■□□□ 1.83
Gm21833J3QPK1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Gm21833J3QPK1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Gm21833J3QPK1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Gm21833J3QPK1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Gm21833J3QPK1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Gm21833J3QPK1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Gm21833J3QPK1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Gm21833J3QPK1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Gm21833J3QPK1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Gm21833J3QPK1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
Gm21833J3QPK1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
Gm21833J3QPK1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Gm21833J3QPK1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Gm21833J3QPK1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Gm21833J3QPK1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Gm21833J3QPK1 Gm24109-201ENSMUST00000175489 103 ntBASIC25.74■■□□□ 1.71
Gm21833J3QPK1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Gm21833J3QPK1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
Gm21833J3QPK1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.68■■□□□ 1.7
Gm21833J3QPK1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Gm21833J3QPK1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Gm21833J3QPK1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.52■■□□□ 1.68
Gm21833J3QPK1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Gm21833J3QPK1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Gm21833J3QPK1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Gm21833J3QPK1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Gm21833J3QPK1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Gm21833J3QPK1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Gm21833J3QPK1 Gm23366-201ENSMUST00000175022 89 ntBASIC25.27■■□□□ 1.64
Gm21833J3QPK1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Gm21833J3QPK1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.24■■□□□ 1.63
Gm21833J3QPK1 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.16■■□□□ 1.62
Gm21833J3QPK1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.15■■□□□ 1.62
Gm21833J3QPK1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.1■■□□□ 1.61
Gm21833J3QPK1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Gm21833J3QPK1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Gm21833J3QPK1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Gm21833J3QPK1 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.05■■□□□ 1.6
Gm21833J3QPK1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Gm21833J3QPK1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Gm21833J3QPK1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.89■■□□□ 1.57
Gm21833J3QPK1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Gm21833J3QPK1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Gm21833J3QPK1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Gm21833J3QPK1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Gm21833J3QPK1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.77■■□□□ 1.56
Gm21833J3QPK1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
Gm21833J3QPK1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.72■■□□□ 1.55
Gm21833J3QPK1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Gm21833J3QPK1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Gm21833J3QPK1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.6■■□□□ 1.53
Gm21833J3QPK1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Gm21833J3QPK1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Gm21833J3QPK1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Gm21833J3QPK1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.41■■□□□ 1.5
Gm21833J3QPK1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Gm21833J3QPK1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Gm21833J3QPK1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Gm21833J3QPK1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Gm21833J3QPK1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Gm21833J3QPK1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Gm21833J3QPK1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Gm21833J3QPK1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Gm21833J3QPK1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Gm21833J3QPK1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Gm21833J3QPK1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.16■■□□□ 1.46
Gm21833J3QPK1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.11■■□□□ 1.45
Gm21833J3QPK1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
Gm21833J3QPK1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.08■■□□□ 1.44
Gm21833J3QPK1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
Gm21833J3QPK1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
Gm21833J3QPK1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Gm21833J3QPK1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Gm21833J3QPK1 Zxda-201ENSMUST00000117281 2621 ntBASIC23.98■■□□□ 1.43
Gm21833J3QPK1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Gm21833J3QPK1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Gm21833J3QPK1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.9■■□□□ 1.42
Gm21833J3QPK1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Gm21833J3QPK1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Gm21833J3QPK1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Gm21833J3QPK1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Gm21833J3QPK1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Gm21833J3QPK1 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Gm21833J3QPK1 Gm27325-201ENSMUST00000175467 74 ntBASIC23.76■■□□□ 1.39
Gm21833J3QPK1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 238.5 ms