Protein–RNA interactions for Protein: Q8R2C6

Vmn1r21, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r21Q8R2C6 Gm25239-201ENSMUST00000174915 86 ntBASIC30.46■■■□□ 2.47
Vmn1r21Q8R2C6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Vmn1r21Q8R2C6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Vmn1r21Q8R2C6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.02■■■□□ 2.24
Vmn1r21Q8R2C6 Psd-208ENSMUST00000224556 2034 ntBASIC28.06■■■□□ 2.08
Vmn1r21Q8R2C6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Vmn1r21Q8R2C6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Vmn1r21Q8R2C6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Vmn1r21Q8R2C6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
Vmn1r21Q8R2C6 Gm15042-201ENSMUST00000120212 883 ntBASIC27.36■■□□□ 1.97
Vmn1r21Q8R2C6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Vmn1r21Q8R2C6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Vmn1r21Q8R2C6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Vmn1r21Q8R2C6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.95■■□□□ 1.9
Vmn1r21Q8R2C6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Vmn1r21Q8R2C6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Vmn1r21Q8R2C6 Gm15045-201ENSMUST00000117359 883 ntBASIC26.87■■□□□ 1.89
Vmn1r21Q8R2C6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Vmn1r21Q8R2C6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Vmn1r21Q8R2C6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Vmn1r21Q8R2C6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Vmn1r21Q8R2C6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Vmn1r21Q8R2C6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Vmn1r21Q8R2C6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Vmn1r21Q8R2C6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Vmn1r21Q8R2C6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Vmn1r21Q8R2C6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.16■■□□□ 1.78
Vmn1r21Q8R2C6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
Vmn1r21Q8R2C6 Gm24109-201ENSMUST00000175489 103 ntBASIC26.05■■□□□ 1.76
Vmn1r21Q8R2C6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Vmn1r21Q8R2C6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Vmn1r21Q8R2C6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26■■□□□ 1.75
Vmn1r21Q8R2C6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Vmn1r21Q8R2C6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Vmn1r21Q8R2C6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Vmn1r21Q8R2C6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Vmn1r21Q8R2C6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
Vmn1r21Q8R2C6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.7■■□□□ 1.71
Vmn1r21Q8R2C6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Vmn1r21Q8R2C6 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.57■■□□□ 1.68
Vmn1r21Q8R2C6 Gm23366-201ENSMUST00000175022 89 ntBASIC25.57■■□□□ 1.68
Vmn1r21Q8R2C6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.56■■□□□ 1.68
Vmn1r21Q8R2C6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
Vmn1r21Q8R2C6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Vmn1r21Q8R2C6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Vmn1r21Q8R2C6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Vmn1r21Q8R2C6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Vmn1r21Q8R2C6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Vmn1r21Q8R2C6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Vmn1r21Q8R2C6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.13■■□□□ 1.61
Vmn1r21Q8R2C6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Vmn1r21Q8R2C6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.08■■□□□ 1.61
Vmn1r21Q8R2C6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Vmn1r21Q8R2C6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Vmn1r21Q8R2C6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Vmn1r21Q8R2C6 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.88■■□□□ 1.57
Vmn1r21Q8R2C6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.88■■□□□ 1.57
Vmn1r21Q8R2C6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Vmn1r21Q8R2C6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Vmn1r21Q8R2C6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
Vmn1r21Q8R2C6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Vmn1r21Q8R2C6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Vmn1r21Q8R2C6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Vmn1r21Q8R2C6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Vmn1r21Q8R2C6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Vmn1r21Q8R2C6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Vmn1r21Q8R2C6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Vmn1r21Q8R2C6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Vmn1r21Q8R2C6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Vmn1r21Q8R2C6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
Vmn1r21Q8R2C6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Vmn1r21Q8R2C6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Vmn1r21Q8R2C6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.52■■□□□ 1.52
Vmn1r21Q8R2C6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Vmn1r21Q8R2C6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Vmn1r21Q8R2C6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Vmn1r21Q8R2C6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Vmn1r21Q8R2C6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.27■■□□□ 1.48
Vmn1r21Q8R2C6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Vmn1r21Q8R2C6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Vmn1r21Q8R2C6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Vmn1r21Q8R2C6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Vmn1r21Q8R2C6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Vmn1r21Q8R2C6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Vmn1r21Q8R2C6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Vmn1r21Q8R2C6 Gm27325-201ENSMUST00000175467 74 ntBASIC24.12■■□□□ 1.45
Vmn1r21Q8R2C6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.11■■□□□ 1.45
Vmn1r21Q8R2C6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.09■■□□□ 1.45
Vmn1r21Q8R2C6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Vmn1r21Q8R2C6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Vmn1r21Q8R2C6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
Vmn1r21Q8R2C6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Vmn1r21Q8R2C6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Vmn1r21Q8R2C6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Vmn1r21Q8R2C6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Vmn1r21Q8R2C6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.01■■□□□ 1.43
Vmn1r21Q8R2C6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Vmn1r21Q8R2C6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Vmn1r21Q8R2C6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.88■■□□□ 1.41
Vmn1r21Q8R2C6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms