RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C AXL1P40851 1208 aa6.33□□□□□ -1.4
VPS4YPR173C YFL064CP43540 174 aa6.33□□□□□ -1.4
VPS4YPR173C NMD5P46970 1048 aa6.33□□□□□ -1.4
VPS4YPR173C RIM8P53179 542 aa6.33□□□□□ -1.4
VPS4YPR173C SCW11P53189 542 aa6.33□□□□□ -1.4
VPS4YPR173C ERP6P53198 216 aa6.33□□□□□ -1.4
VPS4YPR173C FOL1P53848 824 aa6.33□□□□□ -1.4
VPS4YPR173C YNL144CP53907 740 aa6.33□□□□□ -1.4
VPS4YPR173C GIR2Q03768 265 aaPredicted RBP6.33□□□□□ -1.4
VPS4YPR173C SHE9Q04172 456 aa6.33□□□□□ -1.4
VPS4YPR173C TMA64Q04600 565 aaKnown RBP6.33□□□□□ -1.4
VPS4YPR173C NUT2Q06213 157 aa6.33□□□□□ -1.4
VPS4YPR173C TY1A-BLQ12266 440 aa6.33□□□□□ -1.4
VPS4YPR173C RIB2Q12362 591 aaKnown RBP6.33□□□□□ -1.4
VPS4YPR173C YBL111CQ3E7Y5 667 aa6.33□□□□□ -1.4
VPS4YPR173C LEU1P07264 779 aaKnown RBP6.32□□□□□ -1.4
VPS4YPR173C VMA4P22203 233 aaKnown RBP6.32□□□□□ -1.4
VPS4YPR173C GSY1P23337 708 aa6.32□□□□□ -1.4
VPS4YPR173C SRO9P25567 434 aaKnown RBP6.32□□□□□ -1.4
VPS4YPR173C MET22P32179 357 aa6.32□□□□□ -1.4
VPS4YPR173C LDH1P38139 375 aa6.32□□□□□ -1.4
VPS4YPR173C FZO1P38297 855 aa6.32□□□□□ -1.4
VPS4YPR173C PPX1P38698 397 aa6.32□□□□□ -1.4
VPS4YPR173C OSH7P38755 437 aa6.32□□□□□ -1.4
VPS4YPR173C DYS1P38791 387 aa6.32□□□□□ -1.4
VPS4YPR173C LIN1P38852 340 aaPredicted RBP6.32□□□□□ -1.4
VPS4YPR173C SPC72P39723 622 aa6.32□□□□□ -1.4
VPS4YPR173C PSY2P40164 858 aa6.32□□□□□ -1.4
VPS4YPR173C QDR2P40474 542 aa6.32□□□□□ -1.4
VPS4YPR173C COS5P47187 383 aa6.32□□□□□ -1.4
VPS4YPR173C VID30P53076 958 aa6.32□□□□□ -1.4
VPS4YPR173C NNF2P53253 936 aa6.32□□□□□ -1.4
VPS4YPR173C BUL2Q03758 920 aaKnown RBP6.32□□□□□ -1.4
VPS4YPR173C YDR444WQ04093 687 aa6.32□□□□□ -1.4
VPS4YPR173C YLR297WQ05899 129 aa6.32□□□□□ -1.4
VPS4YPR173C YLH47Q06493 454 aa6.32□□□□□ -1.4
VPS4YPR173C FAL1Q12099 399 aaKnown RBP6.32□□□□□ -1.4
VPS4YPR173C FRT1Q99332 602 aa6.32□□□□□ -1.4
VPS4YPR173C SPO16P17122 198 aa6.31□□□□□ -1.4
VPS4YPR173C RPL5P26321 297 aaKnown RBP6.31□□□□□ -1.4
VPS4YPR173C SSE1P32589 693 aaKnown RBP6.31□□□□□ -1.4
VPS4YPR173C KAP122P32767 1081 aa6.31□□□□□ -1.4
VPS4YPR173C TFC4P33339 1025 aa6.31□□□□□ -1.4
VPS4YPR173C TIF5P38431 405 aaKnown RBP6.31□□□□□ -1.4
VPS4YPR173C SIP5P40210 489 aaKnown RBP6.31□□□□□ -1.4
VPS4YPR173C NBP1P52919 319 aaPredicted RBP6.31□□□□□ -1.4
VPS4YPR173C MTO1P53070 669 aa6.31□□□□□ -1.4
VPS4YPR173C GUP1P53154 560 aa6.31□□□□□ -1.4
VPS4YPR173C ESBP6P53918 673 aa6.31□□□□□ -1.4
VPS4YPR173C YNL011CP53980 444 aa6.31□□□□□ -1.4
VPS4YPR173C SHR3Q02774 210 aa6.31□□□□□ -1.4
VPS4YPR173C FUS2Q05670 677 aa6.31□□□□□ -1.4
VPS4YPR173C BDF2Q07442 638 aa6.31□□□□□ -1.4
VPS4YPR173C OSW1Q08692 278 aa6.31□□□□□ -1.4
VPS4YPR173C KEL3Q08979 651 aaPredicted RBP6.31□□□□□ -1.4
VPS4YPR173C SNF1P06782 633 aaKnown RBP6.3□□□□□ -1.4
VPS4YPR173C ACE2P21192 770 aa6.3□□□□□ -1.4
VPS4YPR173C PWP1P21304 576 aaKnown RBP6.3□□□□□ -1.4
VPS4YPR173C TRK2P28584 889 aa6.3□□□□□ -1.4
VPS4YPR173C GCD6P32501 712 aaKnown RBP6.3□□□□□ -1.4
VPS4YPR173C FRD1P32614 470 aaKnown RBP6.3□□□□□ -1.4
VPS4YPR173C MRE11P32829 692 aa6.3□□□□□ -1.4
VPS4YPR173C YBL055CP34220 418 aaPredicted RBP6.3□□□□□ -1.4
VPS4YPR173C YKL050CP35736 922 aa6.3□□□□□ -1.4
VPS4YPR173C PIH1P38768 344 aa6.3□□□□□ -1.4
VPS4YPR173C GAA1P39012 614 aa6.3□□□□□ -1.4
VPS4YPR173C GPD2P41911 440 aaKnown RBP6.3□□□□□ -1.4
VPS4YPR173C PCL10P53124 433 aa6.3□□□□□ -1.4
VPS4YPR173C YNL040WP53960 456 aaPredicted RBP6.3□□□□□ -1.4
VPS4YPR173C BET4Q00618 327 aa6.3□□□□□ -1.4
VPS4YPR173C WRS1Q12109 432 aaKnown RBP6.3□□□□□ -1.4
VPS4YPR173C OCA6Q12454 224 aa6.3□□□□□ -1.4
VPS4YPR173C SWI6P09959 803 aa6.29□□□□□ -1.4
VPS4YPR173C CLN3P13365 580 aa6.29□□□□□ -1.4
VPS4YPR173C RPL8AP17076 256 aaKnown RBP6.29□□□□□ -1.4
VPS4YPR173C SIN4P32259 974 aa6.29□□□□□ -1.4
VPS4YPR173C VPS35P34110 944 aa6.29□□□□□ -1.4
VPS4YPR173C RRT2P38332 387 aa6.29□□□□□ -1.4
VPS4YPR173C HSM3P38348 480 aa6.29□□□□□ -1.4
VPS4YPR173C GVP36P40531 326 aaKnown RBP6.29□□□□□ -1.4
VPS4YPR173C UBP6P43593 499 aaKnown RBP6.29□□□□□ -1.4
VPS4YPR173C YJL181WP46987 611 aa6.29□□□□□ -1.4
VPS4YPR173C BRO1P48582 844 aa6.29□□□□□ -1.4
VPS4YPR173C SNU71P53207 620 aaKnown RBP6.29□□□□□ -1.4
VPS4YPR173C HFD1Q04458 532 aa6.29□□□□□ -1.4
VPS4YPR173C YPL277CQ08989 487 aa6.29□□□□□ -1.4
VPS4YPR173C BUG1Q12191 341 aa6.29□□□□□ -1.4
VPS4YPR173C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.28□□□□□ -1.4not detected
VPS4YPR173C ILV2P07342 687 aaKnown RBP6.28□□□□□ -1.4
VPS4YPR173C PFK1P16861 987 aaKnown RBP6.28□□□□□ -1.4
VPS4YPR173C REC107P21651 314 aa6.28□□□□□ -1.4
VPS4YPR173C MRPL25P23369 157 aa6.28□□□□□ -1.4
VPS4YPR173C SEC21P32074 935 aaKnown RBP6.28□□□□□ -1.4
VPS4YPR173C TRZ1P36159 838 aaPredicted RBP6.28□□□□□ -1.4
VPS4YPR173C HIS2P38635 335 aa6.28□□□□□ -1.4
VPS4YPR173C ATG36P46983 293 aa6.28□□□□□ -1.4
VPS4YPR173C TAF6P53040 516 aa6.28□□□□□ -1.4
VPS4YPR173C ARI1P53111 347 aaKnown RBP6.28□□□□□ -1.4
VPS4YPR173C UTP22P53254 1237 aaPredicted RBP6.28□□□□□ -1.4
VPS4YPR173C NSG2P53898 299 aa6.28□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms