RNA–Protein interactions for RNA: YPR108W

RPN7, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN7, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN7YPR108W TRP2P00899 507 aaKnown RBP6.17□□□□□ -1.42
RPN7YPR108W FBP1P09201 348 aa6.17□□□□□ -1.42
RPN7YPR108W PRE10P21242 288 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
RPN7YPR108W TRK2P28584 889 aa6.17□□□□□ -1.42
RPN7YPR108W UTR4P32626 227 aa6.17□□□□□ -1.42
RPN7YPR108W LOS1P33418 1100 aaPredicted RBP6.17□□□□□ -1.42
RPN7YPR108W POP4P38336 279 aa6.17□□□□□ -1.42
RPN7YPR108W PCM1P38628 557 aaKnown RBP6.17□□□□□ -1.42
RPN7YPR108W RIX1P38883 763 aaPredicted RBP6.17□□□□□ -1.42
RPN7YPR108W AIM21P40563 679 aa6.17□□□□□ -1.42
RPN7YPR108W YGR130CP53278 816 aa6.17□□□□□ -1.42
RPN7YPR108W TBF1Q02457 562 aa6.17□□□□□ -1.42
RPN7YPR108W SHR3Q02774 210 aa6.17□□□□□ -1.42
RPN7YPR108W YDR444WQ04093 687 aa6.17□□□□□ -1.42
RPN7YPR108W TAF10Q12030 206 aa6.17□□□□□ -1.42
RPN7YPR108W YLR278CQ05854 1341 aa6.17□□□□□ -1.42
RPN7YPR108W TUB3P09734 445 aaKnown RBP6.16□□□□□ -1.42
RPN7YPR108W PAT1P25644 796 aaKnown RBP6.16□□□□□ -1.42
RPN7YPR108W EFT1P32324 842 aaKnown RBP6.16□□□□□ -1.42
RPN7YPR108W CBF2P32504 956 aa6.16□□□□□ -1.42
RPN7YPR108W TRM2P33753 639 aa6.16□□□□□ -1.42
RPN7YPR108W YMC2P38087 329 aa6.16□□□□□ -1.42
RPN7YPR108W RRT2P38332 387 aa6.16□□□□□ -1.42
RPN7YPR108W SBE2P42223 864 aaKnown RBP6.16□□□□□ -1.42
RPN7YPR108W MIC19P43594 170 aa6.16□□□□□ -1.42
RPN7YPR108W YML6P51998 286 aa6.16□□□□□ -1.42
RPN7YPR108W NOP13P53883 403 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
RPN7YPR108W ROD1Q02805 837 aa6.16□□□□□ -1.42
RPN7YPR108W SLD5Q03406 294 aa6.16□□□□□ -1.42
RPN7YPR108W CEF1Q03654 590 aaPredicted RBP6.16□□□□□ -1.42
RPN7YPR108W URH1Q04179 340 aa6.16□□□□□ -1.42
RPN7YPR108W IVY1Q04934 453 aa6.16□□□□□ -1.42
RPN7YPR108W DUS3Q06053 668 aaKnown RBP6.16□□□□□ -1.42
RPN7YPR108W WHI4Q07655 649 aaKnown RBP6.16□□□□□ -1.42
RPN7YPR108W GPI13Q07830 1017 aa6.16□□□□□ -1.42
RPN7YPR108W GIS3Q12418 502 aa6.16□□□□□ -1.42
RPN7YPR108W TRM11Q12463 433 aa6.16□□□□□ -1.42
RPN7YPR108W ADE3P07245 946 aaKnown RBP6.15□□□□□ -1.42
RPN7YPR108W TIF1P10081 395 aaKnown RBP6.15□□□□□ -1.42
RPN7YPR108W KAR3P17119 729 aa6.15□□□□□ -1.42
RPN7YPR108W SLY41P22215 453 aa6.15□□□□□ -1.42
RPN7YPR108W ILV6P25605 309 aaKnown RBP6.15□□□□□ -1.42
RPN7YPR108W ABD1P32783 436 aaPredicted RBP6.15□□□□□ -1.42
RPN7YPR108W PEX5P35056 612 aa6.15□□□□□ -1.42
RPN7YPR108W CSG2P35206 410 aa6.15□□□□□ -1.42
RPN7YPR108W SHE3P38272 425 aaKnown RBP6.15□□□□□ -1.42
RPN7YPR108W RGD1P38339 666 aa6.15□□□□□ -1.42
RPN7YPR108W BRL1P38770 471 aa6.15□□□□□ -1.42
RPN7YPR108W LCP5P40079 357 aaPredicted RBP6.15□□□□□ -1.42
RPN7YPR108W SAP185P40856 1058 aa6.15□□□□□ -1.42
RPN7YPR108W LCB2P40970 561 aa6.15□□□□□ -1.42
RPN7YPR108W ALT2P52892 507 aa6.15□□□□□ -1.42
RPN7YPR108W RTA1P53047 317 aa6.15□□□□□ -1.42
RPN7YPR108W COQ9Q05779 260 aa6.15□□□□□ -1.42
RPN7YPR108W YDL057WQ07379 328 aa6.15□□□□□ -1.42
RPN7YPR108W FRA1Q07825 749 aa6.15□□□□□ -1.42
RPN7YPR108W IES4Q08561 116 aa6.15□□□□□ -1.42
RPN7YPR108W CDC53Q12018 815 aaKnown RBP6.15□□□□□ -1.42
RPN7YPR108W RMP1Q12530 201 aa6.15□□□□□ -1.42
RPN7YPR108W WHI2P12611 486 aa6.14□□□□□ -1.43
RPN7YPR108W IRE1P32361 1115 aa6.14□□□□□ -1.43
RPN7YPR108W EFB1P32471 206 aaKnown RBP6.14□□□□□ -1.43
RPN7YPR108W YBL055CP34220 418 aaPredicted RBP6.14□□□□□ -1.43
RPN7YPR108W SEG2P34250 1132 aa6.14□□□□□ -1.43
RPN7YPR108W UBP11P36026 717 aa6.14□□□□□ -1.43
RPN7YPR108W PGM2P37012 569 aaKnown RBP6.14□□□□□ -1.43
RPN7YPR108W ECM2P38241 364 aaKnown RBP6.14□□□□□ -1.43
RPN7YPR108W EXO5P38289 585 aa6.14□□□□□ -1.43
RPN7YPR108W DYS1P38791 387 aa6.14□□□□□ -1.43
RPN7YPR108W SET5P38890 526 aaKnown RBP6.14□□□□□ -1.43
RPN7YPR108W DAS1P47005 663 aa6.14□□□□□ -1.43
RPN7YPR108W TAM41P53230 385 aa6.14□□□□□ -1.43
RPN7YPR108W COG6P53959 839 aa6.14□□□□□ -1.43
RPN7YPR108W YMR187CQ03236 431 aa6.14□□□□□ -1.43
RPN7YPR108W CWC21Q03375 135 aaKnown RBP6.14□□□□□ -1.43
RPN7YPR108W YLR001CQ07895 862 aa6.14□□□□□ -1.43
RPN7YPR108W FMP25Q08023 583 aa6.14□□□□□ -1.43
RPN7YPR108W ERP3Q12403 225 aa6.14□□□□□ -1.43
RPN7YPR108W YDL206WQ12424 762 aa6.14□□□□□ -1.43
RPN7YPR108W POL3P15436 1097 aa6.13□□□□□ -1.43
RPN7YPR108W TUP1P16649 713 aa6.13□□□□□ -1.43
RPN7YPR108W CDC11P32458 415 aa6.13□□□□□ -1.43
RPN7YPR108W MRX3P38172 270 aa6.13□□□□□ -1.43
RPN7YPR108W PCA1P38360 1216 aa6.13□□□□□ -1.43
RPN7YPR108W ULP2P40537 1034 aaPredicted RBP6.13□□□□□ -1.43
RPN7YPR108W CPR7P47103 393 aa6.13□□□□□ -1.43
RPN7YPR108W YJR054WP47114 497 aa6.13□□□□□ -1.43
RPN7YPR108W ASN1P49089 572 aaKnown RBP6.13□□□□□ -1.43
RPN7YPR108W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.13□□□□□ -1.43not detected
RPN7YPR108W PHR1P05066 565 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43not detected
RPN7YPR108W KGD2P19262 463 aaPredicted RBP6.12□□□□□ -1.43
RPN7YPR108W VPS3P23643 1011 aa6.12□□□□□ -1.43
RPN7YPR108W YDJ1P25491 409 aaKnown RBP6.12□□□□□ -1.43
RPN7YPR108W MSH1P25846 959 aa6.12□□□□□ -1.43
RPN7YPR108W HEM3P28789 327 aa6.12□□□□□ -1.43
RPN7YPR108W PLC1P32383 869 aa6.12□□□□□ -1.43
RPN7YPR108W RRN6P32786 894 aa6.12□□□□□ -1.43
RPN7YPR108W SMY2P32909 740 aaKnown RBP6.12□□□□□ -1.43
RPN7YPR108W GDT1P38301 280 aaPredicted RBP6.12□□□□□ -1.43
RPN7YPR108W MMS21P38632 267 aa6.12□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms