RNA–Protein interactions for RNA: YOR332W

VMA4, Transcript of Subunit E of the V1 domain of the vacuolar H+-ATPase (V-ATPase), yeast

Gene VMA4, Length 702 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA4	YOR332W	MDR1	P53258	950 aa		6.29	□□□□□ -1.4
VMA4	YOR332W	GTR1	Q00582	310 aa		6.29	□□□□□ -1.4
VMA4	YOR332W	ERO1	Q03103	563 aa		6.29	□□□□□ -1.4
VMA4	YOR332W	GIR2	Q03768	265 aa	Predicted RBP	6.29	□□□□□ -1.4
VMA4	YOR332W	TDA5	Q06417	326 aa	Known RBP	6.29	□□□□□ -1.4
VMA4	YOR332W	OSW1	Q08692	278 aa		6.29	□□□□□ -1.4
VMA4	YOR332W	PCL8	Q08966	492 aa		6.29	□□□□□ -1.4
VMA4	YOR332W	HIF1	Q12373	385 aa		6.29	□□□□□ -1.4
VMA4	YOR332W	PCK1	P10963	549 aa		6.28	□□□□□ -1.4
VMA4	YOR332W	KAR3	P17119	729 aa		6.28	□□□□□ -1.4
VMA4	YOR332W	SAM2	P19358	384 aa	Known RBP	6.28	□□□□□ -1.4
VMA4	YOR332W	BAS1	P22035	811 aa		6.28	□□□□□ -1.4
VMA4	YOR332W	AFT1	P22149	690 aa		6.28	□□□□□ -1.4
VMA4	YOR332W	RPS7A	P26786	190 aa	Known RBP	6.28	□□□□□ -1.4
VMA4	YOR332W	MVD1	P32377	396 aa	Known RBP	6.28	□□□□□ -1.4
VMA4	YOR332W	YBR032W	P38223	100 aa		6.28	□□□□□ -1.4
VMA4	YOR332W	HIS2	P38635	335 aa		6.28	□□□□□ -1.4
VMA4	YOR332W	END3	P39013	349 aa		6.28	□□□□□ -1.4
VMA4	YOR332W	KAP123	P40069	1113 aa	Known RBP	6.28	□□□□□ -1.4
VMA4	YOR332W	INA22	P40576	216 aa		6.28	□□□□□ -1.4
VMA4	YOR332W	AXL1	P40851	1208 aa		6.28	□□□□□ -1.4
VMA4	YOR332W	LCB2	P40970	561 aa		6.28	□□□□□ -1.4
VMA4	YOR332W	AAD14	P42884	376 aa		6.28	□□□□□ -1.4
VMA4	YOR332W	VPS53	P47061	822 aa		6.28	□□□□□ -1.4
VMA4	YOR332W	COS5	P47187	383 aa		6.28	□□□□□ -1.4
VMA4	YOR332W	SUT1	P53032	299 aa	Known RBP	6.28	□□□□□ -1.4
VMA4	YOR332W	CPR6	P53691	371 aa	Known RBP	6.28	□□□□□ -1.4
VMA4	YOR332W	OYE2	Q03558	400 aa	Known RBP	6.28	□□□□□ -1.4
VMA4	YOR332W	LCB5	Q06147	687 aa	Known RBP	6.28	□□□□□ -1.4
VMA4	YOR332W	GAS5	Q08193	484 aa		6.28	□□□□□ -1.4
VMA4	YOR332W	TY4A-H	Q6Q5P6	413 aa		6.28	□□□□□ -1.4
VMA4	YOR332W	FLO11	P08640	1367 aa		6.28	□□□□□ -1.4
VMA4	YOR332W	ILV2	P07342	687 aa	Known RBP	6.27	□□□□□ -1.41
VMA4	YOR332W	CLN3	P13365	580 aa		6.27	□□□□□ -1.41
VMA4	YOR332W	POL3	P15436	1097 aa		6.27	□□□□□ -1.41
VMA4	YOR332W	MRPS28	P21771	286 aa		6.27	□□□□□ -1.41
VMA4	YOR332W	PRP22	P24384	1145 aa	Known RBP	6.27	□□□□□ -1.41
VMA4	YOR332W	SEC21	P32074	935 aa	Known RBP	6.27	□□□□□ -1.41
VMA4	YOR332W	TFC4	P33339	1025 aa		6.27	□□□□□ -1.41
VMA4	YOR332W	PGM2	P37012	569 aa	Known RBP	6.27	□□□□□ -1.41
VMA4	YOR332W	RRT2	P38332	387 aa		6.27	□□□□□ -1.41
VMA4	YOR332W	TIF5	P38431	405 aa	Known RBP	6.27	□□□□□ -1.41
VMA4	YOR332W	REV7	P38927	245 aa		6.27	□□□□□ -1.41
VMA4	YOR332W	PSY2	P40164	858 aa		6.27	□□□□□ -1.41
VMA4	YOR332W	GSM1	P42950	618 aa		6.27	□□□□□ -1.41
VMA4	YOR332W	LSB1	P53281	241 aa		6.27	□□□□□ -1.41
VMA4	YOR332W	JJJ1	P53863	590 aa		6.27	□□□□□ -1.41
VMA4	YOR332W	YNL040W	P53960	456 aa	Predicted RBP	6.27	□□□□□ -1.41
VMA4	YOR332W	ORC4	P54791	529 aa		6.27	□□□□□ -1.41
VMA4	YOR332W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	6.27	□□□□□ -1.41	not detected
VMA4	YOR332W	SHR3	Q02774	210 aa		6.27	□□□□□ -1.41
VMA4	YOR332W	SHE9	Q04172	456 aa		6.27	□□□□□ -1.41
VMA4	YOR332W	CUR1	Q06469	252 aa		6.27	□□□□□ -1.41
VMA4	YOR332W	RRP15	Q06511	250 aa	Predicted RBP	6.27	□□□□□ -1.41
VMA4	YOR332W	ACK1	Q07622	623 aa	Predicted RBP	6.27	□□□□□ -1.41
VMA4	YOR332W	OXR1	Q08952	273 aa		6.27	□□□□□ -1.41
VMA4	YOR332W	GNT1	Q12096	491 aa		6.27	□□□□□ -1.41
VMA4	YOR332W	SNF1	P06782	633 aa	Known RBP	6.26	□□□□□ -1.41
VMA4	YOR332W	YML002W	P0CF17	737 aa		6.26	□□□□□ -1.41
VMA4	YOR332W	HEM15	P16622	393 aa		6.26	□□□□□ -1.41
VMA4	YOR332W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	6.26	□□□□□ -1.41	not detected
VMA4	YOR332W	YME2	P32843	850 aa		6.26	□□□□□ -1.41
VMA4	YOR332W	STE13	P33894	931 aa		6.26	□□□□□ -1.41
VMA4	YOR332W	MSG5	P38590	489 aa		6.26	□□□□□ -1.41
VMA4	YOR332W	NDT80	P38830	627 aa		6.26	□□□□□ -1.41
VMA4	YOR332W	SPC72	P39723	622 aa		6.26	□□□□□ -1.41
VMA4	YOR332W	TIF4631	P39935	952 aa	Known RBP	6.26	□□□□□ -1.41
VMA4	YOR332W	RLP24	Q07915	199 aa	Known RBP	6.26	□□□□□ -1.41
VMA4	YOR332W	ABP140	Q08641	628 aa	Known RBP	6.26	□□□□□ -1.41
VMA4	YOR332W	ACM1	Q08981	209 aa		6.26	□□□□□ -1.41
VMA4	YOR332W	Q0182	Q9ZZW1	134 aa		6.26	□□□□□ -1.41
VMA4	YOR332W	PHO8	P11491	566 aa		6.25	□□□□□ -1.41
VMA4	YOR332W	CBF1	P17106	351 aa		6.25	□□□□□ -1.41
VMA4	YOR332W	BUD14	P27637	709 aa		6.25	□□□□□ -1.41
VMA4	YOR332W	KIP1	P28742	1111 aa		6.25	□□□□□ -1.41
VMA4	YOR332W	GPI10	P30777	616 aa		6.25	□□□□□ -1.41
VMA4	YOR332W	MET4	P32389	672 aa		6.25	□□□□□ -1.41
VMA4	YOR332W	TRM2	P33753	639 aa		6.25	□□□□□ -1.41
VMA4	YOR332W	RPC37	P36121	282 aa		6.25	□□□□□ -1.41
VMA4	YOR332W	PAM1	P37304	830 aa	Known RBP	6.25	□□□□□ -1.41
VMA4	YOR332W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	6.25	□□□□□ -1.41	not detected
VMA4	YOR332W	EXO5	P38289	585 aa		6.25	□□□□□ -1.41
VMA4	YOR332W	SSN3	P39073	555 aa		6.25	□□□□□ -1.41
VMA4	YOR332W	ULP2	P40537	1034 aa	Predicted RBP	6.25	□□□□□ -1.41
VMA4	YOR332W	YIL001W	P40560	513 aa		6.25	□□□□□ -1.41
VMA4	YOR332W	SEC26	P41810	973 aa	Known RBP	6.25	□□□□□ -1.41
VMA4	YOR332W	ATG36	P46983	293 aa		6.25	□□□□□ -1.41
VMA4	YOR332W	PCL10	P53124	433 aa		6.25	□□□□□ -1.41
VMA4	YOR332W	YNL165W	P53891	406 aa		6.25	□□□□□ -1.41
VMA4	YOR332W	ARK1	P53974	638 aa		6.25	□□□□□ -1.41
VMA4	YOR332W	UTP4	Q06679	776 aa	Known RBP	6.25	□□□□□ -1.41
VMA4	YOR332W	YDL124W	Q07551	312 aa	Known RBP	6.25	□□□□□ -1.41
VMA4	YOR332W	WHI4	Q07655	649 aa	Known RBP	6.25	□□□□□ -1.41
VMA4	YOR332W	GPN2	Q08726	347 aa	Predicted RBP	6.25	□□□□□ -1.41
VMA4	YOR332W	SRF1	Q12516	437 aa		6.25	□□□□□ -1.41
VMA4	YOR332W	GCR1	P07261	785 aa		6.24	□□□□□ -1.41
VMA4	YOR332W	SWI6	P09959	803 aa		6.24	□□□□□ -1.41
VMA4	YOR332W	GCD2	P12754	651 aa	Predicted RBP	6.24	□□□□□ -1.41
VMA4	YOR332W	SPO16	P17122	198 aa		6.24	□□□□□ -1.41
VMA4	YOR332W	SFL1	P20134	766 aa		6.24	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 65 ms