RNA–Protein interactions for RNA: YOR250C

CLP1, Transcript of Component of the cleavage and polyadenylation factor I (CF I), yeastyeast

Gene CLP1, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLP1YOR250C BUD6P41697 788 aa6.15□□□□□ -1.43
CLP1YOR250C CAF130P53280 1122 aaPredicted RBP6.15□□□□□ -1.43
CLP1YOR250C YLR407WQ06070 228 aa6.15□□□□□ -1.43
CLP1YOR250C OMS1Q06668 471 aa6.15□□□□□ -1.43
CLP1YOR250C ACK1Q07622 623 aaPredicted RBP6.15□□□□□ -1.43
CLP1YOR250C RPL22AP05749 121 aaKnown RBP6.14□□□□□ -1.43
CLP1YOR250C CDC6P09119 513 aa6.14□□□□□ -1.43
CLP1YOR250C LPD1P09624 499 aaKnown RBP6.14□□□□□ -1.43
CLP1YOR250C PHO13P19881 312 aa6.14□□□□□ -1.43
CLP1YOR250C CDC20P26309 610 aa6.14□□□□□ -1.43
CLP1YOR250C SWH1P35845 1188 aa6.14□□□□□ -1.43
CLP1YOR250C SHM2P37291 469 aaKnown RBP6.14□□□□□ -1.43
CLP1YOR250C MPT5P39016 859 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
CLP1YOR250C PIB2P53191 635 aa6.14□□□□□ -1.43
CLP1YOR250C ZDS2P54786 942 aa6.14□□□□□ -1.43
CLP1YOR250C VTS1Q08831 523 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
CLP1YOR250C GPB1Q08886 897 aa6.14□□□□□ -1.43
CLP1YOR250C ATG9Q12142 997 aa6.14□□□□□ -1.43
CLP1YOR250C PGA3Q12746 312 aaKnown RBP6.14□□□□□ -1.43
CLP1YOR250C TY1B-AO13527 1196 aaKnown RBP6.13□□□□□ -1.43
CLP1YOR250C BI4P03879 638 aa6.13□□□□□ -1.43
CLP1YOR250C SWI6P09959 803 aa6.13□□□□□ -1.43
CLP1YOR250C PSO2P30620 661 aa6.13□□□□□ -1.43
CLP1YOR250C CCM1P48237 864 aaPredicted RBP6.13□□□□□ -1.43
CLP1YOR250C PXR1P53335 271 aaPredicted RBP6.13□□□□□ -1.43
CLP1YOR250C JJJ1P53863 590 aa6.13□□□□□ -1.43
CLP1YOR250C VPS38Q05919 439 aa6.13□□□□□ -1.43
CLP1YOR250C NDL1Q06568 189 aa6.13□□□□□ -1.43
CLP1YOR250C ARR1Q06596 294 aa6.13□□□□□ -1.43
CLP1YOR250C MDM38Q08179 573 aa6.13□□□□□ -1.43
CLP1YOR250C YPL225WQ08971 146 aaKnown RBP6.13□□□□□ -1.43
CLP1YOR250C INO1P11986 533 aa6.12□□□□□ -1.43
CLP1YOR250C RPL5P26321 297 aaKnown RBP6.12□□□□□ -1.43
CLP1YOR250C PEP3P27801 918 aa6.12□□□□□ -1.43
CLP1YOR250C STO1P34160 861 aaKnown RBP6.12□□□□□ -1.43
CLP1YOR250C OSH3P38713 996 aaKnown RBP6.12□□□□□ -1.43
CLP1YOR250C PET100P38958 111 aa6.12□□□□□ -1.43
CLP1YOR250C CCC2P38995 1004 aa6.12□□□□□ -1.43
CLP1YOR250C VPS8P39702 1274 aa6.12□□□□□ -1.43
CLP1YOR250C YGR053CP53234 283 aa6.12□□□□□ -1.43
CLP1YOR250C VPS62P53285 467 aa6.12□□□□□ -1.43
CLP1YOR250C MAK10Q02197 733 aa6.12□□□□□ -1.43
CLP1YOR250C PKH1Q03407 766 aa6.12□□□□□ -1.43
CLP1YOR250C SPO20Q04359 397 aa6.12□□□□□ -1.43
CLP1YOR250C TMA16Q08687 178 aa6.12□□□□□ -1.43
CLP1YOR250C NFI1Q12216 726 aa6.12□□□□□ -1.43
CLP1YOR250C VPS5Q92331 675 aa6.12□□□□□ -1.43
CLP1YOR250C SUP35P05453 685 aaKnown RBP6.11□□□□□ -1.43
CLP1YOR250C CLN1P20437 546 aa6.11□□□□□ -1.43
CLP1YOR250C OPI1P21957 404 aa6.11□□□□□ -1.43
CLP1YOR250C MCM4P30665 933 aaKnown RBP6.11□□□□□ -1.43
CLP1YOR250C NFU1P32860 256 aa6.11□□□□□ -1.43
CLP1YOR250C YKL107WP34251 309 aa6.11□□□□□ -1.43
CLP1YOR250C PIM1P36775 1133 aa6.11□□□□□ -1.43
CLP1YOR250C BUD16P39988 312 aa6.11□□□□□ -1.43
CLP1YOR250C RIO2P40160 425 aaKnown RBP6.11□□□□□ -1.43
CLP1YOR250C HUL4P40985 892 aa6.11□□□□□ -1.43
CLP1YOR250C BOP3P53958 396 aa6.11□□□□□ -1.43
CLP1YOR250C MEH1Q02205 184 aa6.11□□□□□ -1.43
CLP1YOR250C VTC3Q02725 835 aa6.11□□□□□ -1.43
CLP1YOR250C ATG23Q06671 453 aa6.11□□□□□ -1.43
CLP1YOR250C YPL066WQ12194 479 aa6.11□□□□□ -1.43
CLP1YOR250C YLL058WQ12198 575 aa6.11□□□□□ -1.43
CLP1YOR250C RUD3Q12234 484 aaKnown RBP6.11□□□□□ -1.43
CLP1YOR250C SEC39Q12745 709 aa6.11□□□□□ -1.43
CLP1YOR250C ARD1P07347 238 aaPredicted RBP6.1□□□□□ -1.43
CLP1YOR250C RRP43P25359 394 aaPredicted RBP6.1□□□□□ -1.43
CLP1YOR250C SPT8P38915 602 aa6.1□□□□□ -1.43
CLP1YOR250C HFM1P51979 1187 aa6.1□□□□□ -1.43
CLP1YOR250C HOS2P53096 452 aaPredicted RBP6.1□□□□□ -1.43
CLP1YOR250C HCR1Q05775 265 aaKnown RBP6.1□□□□□ -1.43
CLP1YOR250C ALE1Q08548 619 aa6.1□□□□□ -1.43
CLP1YOR250C SLM3Q12093 417 aa6.1□□□□□ -1.43
CLP1YOR250C OSH2Q12451 1283 aa6.1□□□□□ -1.43
CLP1YOR250C SAC3P46674 1301 aa6.09□□□□□ -1.43
CLP1YOR250C RAD3P06839 778 aa6.09□□□□□ -1.43
CLP1YOR250C ADE17P38009 592 aaKnown RBP6.09□□□□□ -1.43
CLP1YOR250C ATG36P46983 293 aa6.09□□□□□ -1.43
CLP1YOR250C GFD1Q04839 188 aaKnown RBP6.09□□□□□ -1.43
CLP1YOR250C HMI1Q12039 706 aa6.09□□□□□ -1.43
CLP1YOR250C CLF1Q12309 687 aaPredicted RBP6.09□□□□□ -1.43
CLP1YOR250C CBP3P21560 335 aa6.08□□□□□ -1.44
CLP1YOR250C IMP2'P32351 346 aa6.08□□□□□ -1.44
CLP1YOR250C ECM32P32644 1121 aaKnown RBP6.08□□□□□ -1.44
CLP1YOR250C PIN4P34217 668 aaKnown RBP RIP-Chip data6.08□□□□□ -1.44not detected
CLP1YOR250C MOT2P34909 587 aaKnown RBP6.08□□□□□ -1.44
CLP1YOR250C EXO84P38261 753 aa6.08□□□□□ -1.44
CLP1YOR250C EFM2P38347 419 aa6.08□□□□□ -1.44
CLP1YOR250C SIP5P40210 489 aaKnown RBP6.08□□□□□ -1.44
CLP1YOR250C YGL176CP46945 554 aa6.08□□□□□ -1.44
CLP1YOR250C MNN10P50108 393 aaKnown RBP6.08□□□□□ -1.44
CLP1YOR250C MTC3P53077 123 aa6.08□□□□□ -1.44
CLP1YOR250C STE23Q06010 1027 aa6.08□□□□□ -1.44
CLP1YOR250C SFH1Q06168 426 aa6.08□□□□□ -1.44
CLP1YOR250C VAC14Q06708 880 aa6.08□□□□□ -1.44
CLP1YOR250C NOP12Q08208 459 aaKnown RBP6.08□□□□□ -1.44
CLP1YOR250C YOL098CQ12496 1037 aa6.08□□□□□ -1.44
CLP1YOR250C SSK22P25390 1331 aaPredicted RBP6.07□□□□□ -1.44
CLP1YOR250C RPP2AP05319 106 aaKnown RBP6.07□□□□□ -1.44
CLP1YOR250C CLN2P20438 545 aa6.07□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms