RNA–Protein interactions for RNA: YOR124C

UBP2, Transcript of Ubiquitin-specific protease, yeast

Gene UBP2, Length 3,819 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP2	YOR124C	SER33	P40510	469 aa		2.19	□□□□□ -2.06
UBP2	YOR124C	RFX1	P48743	811 aa		2.19	□□□□□ -2.06
UBP2	YOR124C	PAN2	P53010	1115 aa	Predicted RBP	2.19	□□□□□ -2.06
UBP2	YOR124C	LSG1	P53145	640 aa	Known RBP	2.19	□□□□□ -2.06
UBP2	YOR124C	ERP6	P53198	216 aa		2.19	□□□□□ -2.06
UBP2	YOR124C	MDM1	Q01846	1127 aa		2.19	□□□□□ -2.06
UBP2	YOR124C	MUB1	Q03162	620 aa		2.19	□□□□□ -2.06
UBP2	YOR124C	PML39	Q03760	334 aa		2.19	□□□□□ -2.06
UBP2	YOR124C	SMP3	Q04174	516 aa		2.19	□□□□□ -2.06
UBP2	YOR124C	VMS1	Q04311	632 aa	Known RBP	2.19	□□□□□ -2.06
UBP2	YOR124C	YML082W	Q04533	649 aa	Known RBP	2.19	□□□□□ -2.06
UBP2	YOR124C	YPR109W	Q06104	294 aa		2.19	□□□□□ -2.06
UBP2	YOR124C	RSA1	Q08932	381 aa		2.19	□□□□□ -2.06
UBP2	YOR124C	ATP16	Q12165	160 aa		2.19	□□□□□ -2.06
UBP2	YOR124C	TIP41	Q12199	356 aa		2.19	□□□□□ -2.06
UBP2	YOR124C	SSB1	P11484	613 aa	Known RBP	2.18	□□□□□ -2.06
UBP2	YOR124C	GFA1	P14742	717 aa	Known RBP	2.18	□□□□□ -2.06
UBP2	YOR124C	PRP4	P20053	465 aa	Known RBP	2.18	□□□□□ -2.06
UBP2	YOR124C	FAR1	P21268	830 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	PHO84	P25297	587 aa	Known RBP	2.18	□□□□□ -2.06
UBP2	YOR124C	HIR2	P32480	875 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	KTR2	P33550	425 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	PGM2	P37012	569 aa	Known RBP	2.18	□□□□□ -2.06
UBP2	YOR124C	KAP104	P38217	918 aa	Known RBP	2.18	□□□□□ -2.06
UBP2	YOR124C	CCT2	P39076	527 aa	Known RBP	2.18	□□□□□ -2.06
UBP2	YOR124C	CCT6	P39079	546 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	TIF4631	P39935	952 aa	Known RBP	2.18	□□□□□ -2.06
UBP2	YOR124C	SSB2	P40150	613 aa	Known RBP	2.18	□□□□□ -2.06
UBP2	YOR124C	ROK1	P45818	564 aa	Predicted RBP	2.18	□□□□□ -2.06
UBP2	YOR124C	FYV8	P46949	817 aa	Known RBP	2.18	□□□□□ -2.06
UBP2	YOR124C	YGL108C	P53139	140 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	TMA20	P89886	181 aa	Predicted RBP	2.18	□□□□□ -2.06
UBP2	YOR124C	CIK1	Q01649	594 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	UME1	Q03010	460 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	DON1	Q05610	365 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	ATG13	Q06628	738 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	RKM1	Q08961	583 aa	Predicted RBP	2.18	□□□□□ -2.06
UBP2	YOR124C	CDC53	Q12018	815 aa	Known RBP	2.18	□□□□□ -2.06
UBP2	YOR124C	PHM7	Q12252	991 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	APC2	Q12440	853 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	HMG1	P12683	1054 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	NMT1	P14743	455 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	REC107	P21651	314 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	ICL1	P28240	557 aa	Predicted RBP	2.18	□□□□□ -2.06
UBP2	YOR124C	SEC21	P32074	935 aa	Known RBP	2.18	□□□□□ -2.06
UBP2	YOR124C	UBC6	P33296	250 aa	Predicted RBP	2.18	□□□□□ -2.06
UBP2	YOR124C	HSP78	P33416	811 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	YPK3	P38070	525 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	CAB2	P40506	365 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	YRB2	P40517	327 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	RLP7	P40693	322 aa	Known RBP	2.18	□□□□□ -2.06
UBP2	YOR124C	ZPR1	P53303	486 aa	Known RBP	2.18	□□□□□ -2.06
UBP2	YOR124C	ZDS2	P54786	942 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	BET4	Q00618	327 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	EMI2	Q04409	500 aa	Known RBP	2.18	□□□□□ -2.06
UBP2	YOR124C	HFD1	Q04458	532 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	YML083C	Q04526	418 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	CUR1	Q06469	252 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	FAL1	Q12099	399 aa	Known RBP	2.18	□□□□□ -2.06
UBP2	YOR124C	HIS4	P00815	799 aa	Known RBP	2.18	□□□□□ -2.06
UBP2	YOR124C	TUB3	P09734	445 aa	Known RBP	2.18	□□□□□ -2.06
UBP2	YOR124C	ATR1	P13090	542 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	MGM1	P32266	881 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	YKL222C	P35995	705 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	YBR241C	P38142	488 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	ATG14	P38270	344 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	YBR225W	P38321	900 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	AKR1	P39010	764 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	LCP5	P40079	357 aa	Predicted RBP	2.18	□□□□□ -2.06
UBP2	YOR124C	YER137C	P40083	148 aa	Known RBP	2.18	□□□□□ -2.06
UBP2	YOR124C	NUP82	P40368	713 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	AGP3	P43548	558 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	OSW7	P43611	510 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	SAE2	P46946	345 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	BRO1	P48582	844 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	ALT1	P52893	592 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	RTC4	P53850	401 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	NIS1	P53939	407 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	SED5	Q01590	340 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	YPL034W	Q03083	165 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	YLR287C	Q05881	355 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	YPR196W	Q06595	470 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	YOL019W	Q08157	551 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	DIS3	Q08162	1001 aa	Known RBP	2.18	□□□□□ -2.06
UBP2	YOR124C	PCL8	Q08966	492 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	CWC2	Q12046	339 aa	Predicted RBP	2.18	□□□□□ -2.06
UBP2	YOR124C	HSP42	Q12329	375 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	YEL077C	Q3E7X8	1277 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	SEY1	Q99287	776 aa		2.18	□□□□□ -2.06
UBP2	YOR124C	RPS3	P05750	240 aa	Known RBP	2.17	□□□□□ -2.06
UBP2	YOR124C	RGP1	P16664	663 aa		2.17	□□□□□ -2.06
UBP2	YOR124C	UBA1	P22515	1024 aa	Known RBP	2.17	□□□□□ -2.06
UBP2	YOR124C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	2.17	□□□□□ -2.06	not detected
UBP2	YOR124C	MCM5	P29496	775 aa	Known RBP	2.17	□□□□□ -2.06
UBP2	YOR124C	GYP6	P32806	458 aa		2.17	□□□□□ -2.06
UBP2	YOR124C	SPC97	P38863	823 aa		2.17	□□□□□ -2.06
UBP2	YOR124C	SEC31	P38968	1273 aa	Known RBP	2.17	□□□□□ -2.06
UBP2	YOR124C	STT3	P39007	718 aa	Known RBP	2.17	□□□□□ -2.06
UBP2	YOR124C	DPH1	P40487	425 aa	Known RBP	2.17	□□□□□ -2.06
UBP2	YOR124C	VHR1	P40522	640 aa		2.17	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 275.1 ms