RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C TNA1P53322 534 aa2.9□□□□□ -1.94
DNL4YOR005C GIS4Q04233 774 aa2.9□□□□□ -1.94
DNL4YOR005C YMR018WQ04364 514 aa2.9□□□□□ -1.94
DNL4YOR005C ARP7Q12406 477 aa2.9□□□□□ -1.94
DNL4YOR005C TY4A-HQ6Q5P6 413 aa2.9□□□□□ -1.94
DNL4YOR005C DIF1O13577 133 aa2.9□□□□□ -1.95
DNL4YOR005C SWI6P09959 803 aa2.9□□□□□ -1.95
DNL4YOR005C SAC7P17121 654 aa2.9□□□□□ -1.95
DNL4YOR005C OPI1P21957 404 aa2.9□□□□□ -1.95
DNL4YOR005C NAR1P23503 491 aaKnown RBP2.9□□□□□ -1.95
DNL4YOR005C CYS3P31373 394 aaKnown RBP2.9□□□□□ -1.95
DNL4YOR005C YSC84P32793 468 aa2.9□□□□□ -1.95
DNL4YOR005C SMY2P32909 740 aaKnown RBP2.9□□□□□ -1.95
DNL4YOR005C YKR018CP36114 725 aa2.9□□□□□ -1.95
DNL4YOR005C SPC72P39723 622 aa2.9□□□□□ -1.95
DNL4YOR005C YIL092WP40497 633 aa2.9□□□□□ -1.95
DNL4YOR005C HOL1P53389 586 aa2.9□□□□□ -1.95
DNL4YOR005C DOT1Q04089 582 aaKnown RBP2.9□□□□□ -1.95
DNL4YOR005C OPT2Q06593 877 aa2.9□□□□□ -1.95
DNL4YOR005C OMS1Q06668 471 aa2.9□□□□□ -1.95
DNL4YOR005C BRE4Q07660 1125 aa2.9□□□□□ -1.95
DNL4YOR005C YOR223WQ12015 292 aa2.9□□□□□ -1.95
DNL4YOR005C TY1A-BLQ12266 440 aa2.9□□□□□ -1.95
DNL4YOR005C KCS1Q12494 1050 aa2.9□□□□□ -1.95
DNL4YOR005C IML1P47170 1584 aa2.9□□□□□ -1.95
DNL4YOR005C URA1P28272 314 aaPredicted RBP2.89□□□□□ -1.95
DNL4YOR005C NAM7P30771 971 aaKnown RBP2.89□□□□□ -1.95
DNL4YOR005C XRS2P33301 854 aa2.89□□□□□ -1.95
DNL4YOR005C TFC3P34111 1160 aa2.89□□□□□ -1.95
DNL4YOR005C MAE1P36013 669 aaKnown RBP2.89□□□□□ -1.95
DNL4YOR005C RAD26P40352 1085 aa2.89□□□□□ -1.95
DNL4YOR005C RRT14P40470 206 aa2.89□□□□□ -1.95
DNL4YOR005C BUD27P43573 796 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
DNL4YOR005C VTC2P43585 828 aa2.89□□□□□ -1.95
DNL4YOR005C UPF3P48412 387 aaKnown RBP2.89□□□□□ -1.95
DNL4YOR005C ARC35P53731 342 aaKnown RBP2.89□□□□□ -1.95
DNL4YOR005C HDA1P53973 706 aa2.89□□□□□ -1.95
DNL4YOR005C ADE12P80210 433 aaKnown RBP2.89□□□□□ -1.95
DNL4YOR005C RPN7Q06103 429 aaKnown RBP2.89□□□□□ -1.95
DNL4YOR005C NUR1Q12066 484 aa2.89□□□□□ -1.95
DNL4YOR005C YLR149CQ99296 730 aa2.89□□□□□ -1.95
DNL4YOR005C BUD3P25558 1636 aa2.89□□□□□ -1.95
DNL4YOR005C SAN1P22470 610 aa2.89□□□□□ -1.95
DNL4YOR005C RPC82P32349 654 aa2.89□□□□□ -1.95
DNL4YOR005C NGG1P32494 702 aa2.89□□□□□ -1.95
DNL4YOR005C NUP120P35729 1037 aa2.89□□□□□ -1.95
DNL4YOR005C TAF5P38129 798 aa2.89□□□□□ -1.95
DNL4YOR005C NMD3P38861 518 aaKnown RBP2.89□□□□□ -1.95
DNL4YOR005C NOP16P40007 231 aaKnown RBP2.89□□□□□ -1.95
DNL4YOR005C FAF1P40546 346 aaPredicted RBP2.89□□□□□ -1.95
DNL4YOR005C YJR039WP47107 1121 aa2.89□□□□□ -1.95
DNL4YOR005C SGM1P47166 707 aa2.89□□□□□ -1.95
DNL4YOR005C YDR444WQ04093 687 aa2.89□□□□□ -1.95
DNL4YOR005C YLR346CQ06139 101 aa2.89□□□□□ -1.95
DNL4YOR005C SYT1Q06836 1226 aa2.89□□□□□ -1.95
DNL4YOR005C YDL144CQ07589 356 aa2.89□□□□□ -1.95
DNL4YOR005C RSC58Q07979 502 aa2.89□□□□□ -1.95
DNL4YOR005C RCL1Q08096 367 aaPredicted RBP2.89□□□□□ -1.95
DNL4YOR005C CWC2Q12046 339 aaPredicted RBP2.89□□□□□ -1.95
DNL4YOR005C LSP1Q12230 341 aaKnown RBP2.89□□□□□ -1.95
DNL4YOR005C HIF1Q12373 385 aa2.89□□□□□ -1.95
DNL4YOR005C Q0142Q9ZZW4 58 aa2.89□□□□□ -1.95
DNL4YOR005C CDC26P14724 124 aa2.88□□□□□ -1.95
DNL4YOR005C PHO3P24031 467 aa2.88□□□□□ -1.95
DNL4YOR005C SWI3P32591 825 aa2.88□□□□□ -1.95
DNL4YOR005C APM3P38153 483 aa2.88□□□□□ -1.95
DNL4YOR005C BCD1P38772 366 aa2.88□□□□□ -1.95
DNL4YOR005C SET5P38890 526 aaKnown RBP2.88□□□□□ -1.95
DNL4YOR005C BEM4P39011 633 aa2.88□□□□□ -1.95
DNL4YOR005C FUN12P39730 1002 aaKnown RBP2.88□□□□□ -1.95
DNL4YOR005C SAW1P39735 261 aa2.88□□□□□ -1.95
DNL4YOR005C EAF5P39995 279 aa2.88□□□□□ -1.95
DNL4YOR005C IRC5P43610 853 aa2.88□□□□□ -1.95
DNL4YOR005C SGD1Q06132 899 aa2.88□□□□□ -1.95
DNL4YOR005C GRC3Q07845 632 aa2.88□□□□□ -1.95
DNL4YOR005C THI21Q08975 551 aa2.88□□□□□ -1.95
DNL4YOR005C NOT3P06102 836 aaKnown RBP2.88□□□□□ -1.95
DNL4YOR005C MTF2P10849 440 aa2.88□□□□□ -1.95
DNL4YOR005C PCT1P13259 424 aa2.88□□□□□ -1.95
DNL4YOR005C RFA1P22336 621 aaKnown RBP2.88□□□□□ -1.95
DNL4YOR005C MUD2P36084 527 aaKnown RBP2.88□□□□□ -1.95
DNL4YOR005C SRP68P38687 599 aaKnown RBP2.88□□□□□ -1.95
DNL4YOR005C SSZ1P38788 538 aaKnown RBP2.88□□□□□ -1.95
DNL4YOR005C LAM1P38851 1228 aa2.88□□□□□ -1.95
DNL4YOR005C PIK1P39104 1066 aa2.88□□□□□ -1.95
DNL4YOR005C ARP4P80428 489 aa2.88□□□□□ -1.95
DNL4YOR005C TY1A-MR1Q04215 440 aa2.88□□□□□ -1.95
DNL4YOR005C TFC6Q06339 672 aa2.88□□□□□ -1.95
DNL4YOR005C YOR059CQ08448 450 aaKnown RBP2.88□□□□□ -1.95
DNL4YOR005C YRF1-4O13559 1382 aa2.88□□□□□ -1.95
DNL4YOR005C YML133CQ03099 1374 aa2.88□□□□□ -1.95
DNL4YOR005C YLL067CQ07888 1374 aa2.88□□□□□ -1.95
DNL4YOR005C YLL066CQ99208 1374 aa2.88□□□□□ -1.95
DNL4YOR005C HOM3P10869 527 aa2.87□□□□□ -1.95
DNL4YOR005C PDC5P16467 563 aaKnown RBP2.87□□□□□ -1.95
DNL4YOR005C ACE2P21192 770 aa2.87□□□□□ -1.95
DNL4YOR005C YCL049CP25577 312 aa2.87□□□□□ -1.95
DNL4YOR005C SEG2P34250 1132 aa2.87□□□□□ -1.95
DNL4YOR005C SDS22P36047 338 aa2.87□□□□□ -1.95
DNL4YOR005C CCZ1P38273 704 aa2.87□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms