RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeast

Gene SHR5, Length 714 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHR5	YOL110W	SHE3	P38272	425 aa	Known RBP	15.33	■□□□□ 0.04
SHR5	YOL110W	CBR1	P38626	284 aa	Known RBP	15.33	■□□□□ 0.04
SHR5	YOL110W	OPT1	P40897	799 aa		15.33	■□□□□ 0.04
SHR5	YOL110W	MND1	P53102	219 aa		15.33	■□□□□ 0.04
SHR5	YOL110W	VPS60	Q03390	229 aa		15.33	■□□□□ 0.04
SHR5	YOL110W	YDR222W	Q04925	415 aa		15.33	■□□□□ 0.04
SHR5	YOL110W	HAP2	P06774	265 aa		15.32	■□□□□ 0.04
SHR5	YOL110W	ADK2	P26364	225 aa		15.32	■□□□□ 0.04
SHR5	YOL110W	MAC1	P35192	417 aa		15.32	■□□□□ 0.04
SHR5	YOL110W	HIS2	P38635	335 aa		15.32	■□□□□ 0.04
SHR5	YOL110W	JHD1	P40034	492 aa		15.32	■□□□□ 0.04
SHR5	YOL110W	SIP5	P40210	489 aa	Known RBP	15.32	■□□□□ 0.04
SHR5	YOL110W	POL31	P46957	487 aa		15.32	■□□□□ 0.04
SHR5	YOL110W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	15.32	■□□□□ 0.04	not detected
SHR5	YOL110W	ERV41	Q04651	352 aa		15.32	■□□□□ 0.04
SHR5	YOL110W	JIP3	O13555	125 aa		15.31	■□□□□ 0.04
SHR5	YOL110W	SAT4	P25333	603 aa	Known RBP	15.31	■□□□□ 0.04
SHR5	YOL110W	FRE1	P32791	686 aa		15.31	■□□□□ 0.04
SHR5	YOL110W	NCL1	P38205	684 aa	Known RBP	15.31	■□□□□ 0.04
SHR5	YOL110W	MSC7	P38694	644 aa		15.31	■□□□□ 0.04
SHR5	YOL110W	MUB1	Q03162	620 aa		15.31	■□□□□ 0.04
SHR5	YOL110W	YMR114C	Q04471	368 aa	Known RBP	15.31	■□□□□ 0.04
SHR5	YOL110W	PET111	P08468	800 aa		15.3	■□□□□ 0.04
SHR5	YOL110W	GAC1	P28006	793 aa		15.3	■□□□□ 0.04
SHR5	YOL110W	RSC8	P43609	557 aa	Known RBP	15.3	■□□□□ 0.04
SHR5	YOL110W	PUS2	P53167	370 aa		15.3	■□□□□ 0.04
SHR5	YOL110W	HOS3	Q02959	697 aa	Known RBP	15.3	■□□□□ 0.04
SHR5	YOL110W	TRE1	Q08919	783 aa		15.3	■□□□□ 0.04
SHR5	YOL110W	UBR2	Q07963	1872 aa		15.29	■□□□□ 0.04
SHR5	YOL110W	HIP1	P06775	603 aa		15.29	■□□□□ 0.04
SHR5	YOL110W	GFA1	P14742	717 aa	Known RBP	15.29	■□□□□ 0.04
SHR5	YOL110W	DBF4	P32325	704 aa		15.29	■□□□□ 0.04
SHR5	YOL110W	REI1	P38344	393 aa	Predicted RBP	15.29	■□□□□ 0.04
SHR5	YOL110W	RCK2	P38623	610 aa		15.29	■□□□□ 0.04
SHR5	YOL110W	YEL075C	P39972	122 aa		15.29	■□□□□ 0.04
SHR5	YOL110W	DSE1	P40077	573 aa		15.29	■□□□□ 0.04
SHR5	YOL110W	DIG1	Q03063	452 aa	Known RBP	15.29	■□□□□ 0.04
SHR5	YOL110W	BI2	P03873	423 aa		15.28	■□□□□ 0.04
SHR5	YOL110W	BI4	P03879	638 aa		15.28	■□□□□ 0.04
SHR5	YOL110W	TPK1	P06244	397 aa		15.28	■□□□□ 0.04
SHR5	YOL110W	YEL043W	P32618	956 aa		15.28	■□□□□ 0.04
SHR5	YOL110W	YEL023C	P39992	682 aa		15.28	■□□□□ 0.04
SHR5	YOL110W	ATG16	Q03818	150 aa		15.28	■□□□□ 0.04
SHR5	YOL110W	ARO80	Q04052	950 aa		15.28	■□□□□ 0.04
SHR5	YOL110W	YOR059C	Q08448	450 aa	Known RBP	15.28	■□□□□ 0.04
SHR5	YOL110W	BI3	Q9ZZW7	517 aa		15.28	■□□□□ 0.04
SHR5	YOL110W	LRE1	P25579	583 aa	Known RBP	15.27	■□□□□ 0.04
SHR5	YOL110W	DPB3	P27344	201 aa		15.27	■□□□□ 0.04
SHR5	YOL110W	RRT2	P38332	387 aa		15.27	■□□□□ 0.04
SHR5	YOL110W	QNS1	P38795	714 aa	Known RBP	15.27	■□□□□ 0.04
SHR5	YOL110W	SMF1	P38925	575 aa		15.27	■□□□□ 0.04
SHR5	YOL110W	BRO1	P48582	844 aa		15.27	■□□□□ 0.04
SHR5	YOL110W	CWC22	P53333	577 aa	Known RBP	15.27	■□□□□ 0.04
SHR5	YOL110W	GYL1	Q04322	720 aa		15.27	■□□□□ 0.04
SHR5	YOL110W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	15.27	■□□□□ 0.04	not detected
SHR5	YOL110W	TAF10	Q12030	206 aa		15.27	■□□□□ 0.04
SHR5	YOL110W	KAR3	P17119	729 aa		15.26	■□□□□ 0.03
SHR5	YOL110W	KGD2	P19262	463 aa	Predicted RBP	15.26	■□□□□ 0.03
SHR5	YOL110W	MRP4	P32902	394 aa		15.26	■□□□□ 0.03
SHR5	YOL110W	SLA2	P33338	968 aa		15.26	■□□□□ 0.03
SHR5	YOL110W	HMT1	P38074	348 aa		15.26	■□□□□ 0.03
SHR5	YOL110W	RPT2	P40327	437 aa	Known RBP	15.26	■□□□□ 0.03
SHR5	YOL110W	MCM6	P53091	1017 aa	Known RBP	15.26	■□□□□ 0.03
SHR5	YOL110W	SPP1	Q03012	353 aa		15.26	■□□□□ 0.03
SHR5	YOL110W	POB3	Q04636	552 aa	Known RBP	15.26	■□□□□ 0.03
SHR5	YOL110W	ABD1	P32783	436 aa	Predicted RBP	15.25	■□□□□ 0.03
SHR5	YOL110W	SEG2	P34250	1132 aa		15.25	■□□□□ 0.03
SHR5	YOL110W	YBL036C	P38197	257 aa		15.25	■□□□□ 0.03
SHR5	YOL110W	CEP3	P40969	608 aa		15.25	■□□□□ 0.03
SHR5	YOL110W	MDM38	Q08179	573 aa		15.25	■□□□□ 0.03
SHR5	YOL110W	YLR462W	O13556	202 aa		15.24	■□□□□ 0.03
SHR5	YOL110W	PRC1	P00729	532 aa		15.24	■□□□□ 0.03
SHR5	YOL110W	STE11	P23561	717 aa		15.24	■□□□□ 0.03
SHR5	YOL110W	PAP1	P29468	568 aa	Known RBP	15.24	■□□□□ 0.03
SHR5	YOL110W	YHL049C	P38722	271 aa		15.24	■□□□□ 0.03
SHR5	YOL110W	YER189W	P40104	122 aa		15.24	■□□□□ 0.03
SHR5	YOL110W	YFL064C	P43540	174 aa		15.24	■□□□□ 0.03
SHR5	YOL110W	SNZ3	P43545	298 aa		15.24	■□□□□ 0.03
SHR5	YOL110W	MAL13	P53338	473 aa		15.24	■□□□□ 0.03
SHR5	YOL110W	SNZ2	P53824	298 aa		15.24	■□□□□ 0.03
SHR5	YOL110W	EMI2	Q04409	500 aa	Known RBP	15.24	■□□□□ 0.03
SHR5	YOL110W	VPS54	Q12071	889 aa		15.24	■□□□□ 0.03
SHR5	YOL110W	EMP46	Q12396	444 aa		15.24	■□□□□ 0.03
SHR5	YOL110W	YBL111C	Q3E7Y5	667 aa		15.24	■□□□□ 0.03
SHR5	YOL110W	NOP14	Q99207	810 aa	Known RBP	15.24	■□□□□ 0.03
SHR5	YOL110W	ADE3	P07245	946 aa	Known RBP	15.23	■□□□□ 0.03
SHR5	YOL110W	EST1	P17214	699 aa	Predicted RBP	15.23	■□□□□ 0.03
SHR5	YOL110W	VPH1	P32563	840 aa	Known RBP	15.23	■□□□□ 0.03
SHR5	YOL110W	BYE1	P36106	594 aa		15.23	■□□□□ 0.03
SHR5	YOL110W	LCP5	P40079	357 aa	Predicted RBP	15.23	■□□□□ 0.03
SHR5	YOL110W	ASG1	P40467	964 aa		15.23	■□□□□ 0.03
SHR5	YOL110W	YFL052W	P43551	465 aa		15.23	■□□□□ 0.03
SHR5	YOL110W	NUT1	P53114	1132 aa		15.23	■□□□□ 0.03
SHR5	YOL110W	MET13	P53128	600 aa		15.23	■□□□□ 0.03
SHR5	YOL110W	PNG1	Q02890	363 aa		15.23	■□□□□ 0.03
SHR5	YOL110W	SXM1	Q04175	944 aa	Known RBP	15.23	■□□□□ 0.03
SHR5	YOL110W	YML083C	Q04526	418 aa		15.23	■□□□□ 0.03
SHR5	YOL110W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	15.23	■□□□□ 0.03	not detected
SHR5	YOL110W	GPM2	Q12008	311 aa		15.23	■□□□□ 0.03
SHR5	YOL110W	ZRT2	Q12436	422 aa		15.23	■□□□□ 0.03

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms