RNA–Protein interactions for RNA: YNL132W

KRE33, Transcript of Protein required for biogenesis of the small ribosomal subunit, yeast

Gene KRE33, Length 3,171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KRE33	YNL132W	POL3	P15436	1097 aa		2.59	□□□□□ -2
KRE33	YNL132W	TRM1	P15565	570 aa	Known RBP	2.59	□□□□□ -2
KRE33	YNL132W	DBP2	P24783	546 aa	Known RBP	2.59	□□□□□ -2
KRE33	YNL132W	MSH1	P25846	959 aa		2.59	□□□□□ -2
KRE33	YNL132W	MLS1	P30952	554 aa		2.59	□□□□□ -2
KRE33	YNL132W	BMH2	P34730	273 aa	Known RBP	2.59	□□□□□ -2
KRE33	YNL132W	MRP8	P35719	219 aa		2.59	□□□□□ -2
KRE33	YNL132W	MCD4	P36051	919 aa		2.59	□□□□□ -2
KRE33	YNL132W	CUE2	P36075	443 aa	Known RBP	2.59	□□□□□ -2
KRE33	YNL132W	STN1	P38960	494 aa		2.59	□□□□□ -2
KRE33	YNL132W	NOP16	P40007	231 aa	Known RBP	2.59	□□□□□ -2
KRE33	YNL132W	PIC2	P40035	300 aa		2.59	□□□□□ -2
KRE33	YNL132W	PKP1	P40530	394 aa		2.59	□□□□□ -2
KRE33	YNL132W	SEC26	P41810	973 aa	Known RBP	2.59	□□□□□ -2
KRE33	YNL132W	QRI7	P43122	407 aa		2.59	□□□□□ -2
KRE33	YNL132W	STU2	P46675	888 aa		2.59	□□□□□ -2
KRE33	YNL132W	ENP2	P48234	707 aa	Known RBP	2.59	□□□□□ -2
KRE33	YNL132W	BPL1	P48445	690 aa	Predicted RBP	2.59	□□□□□ -2
KRE33	YNL132W	ZIP2	P53061	704 aa		2.59	□□□□□ -2
KRE33	YNL132W	CDC55	Q00362	526 aa		2.59	□□□□□ -2
KRE33	YNL132W	RMT2	Q03305	412 aa		2.59	□□□□□ -2
KRE33	YNL132W	MRD1	Q06106	887 aa	Known RBP	2.59	□□□□□ -2
KRE33	YNL132W	YLR001C	Q07895	862 aa		2.59	□□□□□ -2
KRE33	YNL132W	AVL9	Q12500	764 aa		2.59	□□□□□ -2
KRE33	YNL132W	BRR1	Q99177	341 aa	Predicted RBP	2.59	□□□□□ -2
KRE33	YNL132W	MST1	P07236	462 aa		2.58	□□□□□ -2
KRE33	YNL132W	MSS18	P08593	268 aa		2.58	□□□□□ -2
KRE33	YNL132W	CLC1	P17891	233 aa		2.58	□□□□□ -2
KRE33	YNL132W	GSY1	P23337	708 aa		2.58	□□□□□ -2
KRE33	YNL132W	VPS3	P23643	1011 aa		2.58	□□□□□ -2
KRE33	YNL132W	NPP1	P25353	742 aa		2.58	□□□□□ -2
KRE33	YNL132W	HSP104	P31539	908 aa	Known RBP	2.58	□□□□□ -2
KRE33	YNL132W	ASF2	P32448	525 aa	Predicted RBP	2.58	□□□□□ -2
KRE33	YNL132W	DAL3	P32459	195 aa		2.58	□□□□□ -2
KRE33	YNL132W	HIR2	P32480	875 aa		2.58	□□□□□ -2
KRE33	YNL132W	DOA4	P32571	926 aa		2.58	□□□□□ -2
KRE33	YNL132W	ABD1	P32783	436 aa	Predicted RBP	2.58	□□□□□ -2
KRE33	YNL132W	SWD1	P39706	426 aa		2.58	□□□□□ -2
KRE33	YNL132W	OSW5	P40219	148 aa		2.58	□□□□□ -2
KRE33	YNL132W	MET12	P46151	657 aa		2.58	□□□□□ -2
KRE33	YNL132W	NUP85	P46673	744 aa		2.58	□□□□□ -2
KRE33	YNL132W	YJR098C	P47139	656 aa		2.58	□□□□□ -2
KRE33	YNL132W	MAL11	P53048	616 aa		2.58	□□□□□ -2
KRE33	YNL132W	YNR068C	P53754	272 aa		2.58	□□□□□ -2
KRE33	YNL132W	CIK1	Q01649	594 aa		2.58	□□□□□ -2
KRE33	YNL132W	FRK1	Q03002	865 aa	Predicted RBP	2.58	□□□□□ -2
KRE33	YNL132W	MFB1	Q04922	465 aa		2.58	□□□□□ -2
KRE33	YNL132W	SPH1	Q06160	661 aa		2.58	□□□□□ -2
KRE33	YNL132W	RTT10	Q08924	1013 aa		2.58	□□□□□ -2
KRE33	YNL132W	RMP1	Q12530	201 aa		2.58	□□□□□ -2
KRE33	YNL132W	SEC39	Q12745	709 aa		2.58	□□□□□ -2
KRE33	YNL132W	CET1	O13297	549 aa	Predicted RBP	2.58	□□□□□ -2
KRE33	YNL132W	CDC19	P00549	500 aa	Known RBP	2.58	□□□□□ -2
KRE33	YNL132W	RAD18	P10862	487 aa		2.58	□□□□□ -2
KRE33	YNL132W	MSS116	P15424	664 aa	Known RBP	2.58	□□□□□ -2
KRE33	YNL132W	SED4	P25365	1065 aa		2.58	□□□□□ -2
KRE33	YNL132W	MKK2	P32491	506 aa		2.58	□□□□□ -2
KRE33	YNL132W	SUV3	P32580	737 aa		2.58	□□□□□ -2
KRE33	YNL132W	LTV1	P34078	463 aa		2.58	□□□□□ -2
KRE33	YNL132W	VBA5	P36172	582 aa		2.58	□□□□□ -2
KRE33	YNL132W	RGA1	P39083	1007 aa		2.58	□□□□□ -2
KRE33	YNL132W	SIT1	P39980	628 aa		2.58	□□□□□ -2
KRE33	YNL132W	TMN3	P40071	706 aa		2.58	□□□□□ -2
KRE33	YNL132W	DUG1	P43616	481 aa	Known RBP	2.58	□□□□□ -2
KRE33	YNL132W	NIT2	P47016	307 aa		2.58	□□□□□ -2
KRE33	YNL132W	LIA1	P47120	325 aa	Known RBP	2.58	□□□□□ -2
KRE33	YNL132W	YJR096W	P47137	282 aa		2.58	□□□□□ -2
KRE33	YNL132W	CGR1	P53188	120 aa		2.58	□□□□□ -2
KRE33	YNL132W	ART5	P53244	586 aa	Known RBP	2.58	□□□□□ -2
KRE33	YNL132W	ARP5	P53946	755 aa		2.58	□□□□□ -2
KRE33	YNL132W	UBP2	Q01476	1272 aa		2.58	□□□□□ -2
KRE33	YNL132W	RBA50	Q04418	439 aa		2.58	□□□□□ -2
KRE33	YNL132W	BUG1	Q12191	341 aa		2.58	□□□□□ -2
KRE33	YNL132W	CMR1	Q12510	522 aa	Known RBP	2.58	□□□□□ -2
KRE33	YNL132W	ADE6	P38972	1358 aa	Known RBP	2.58	□□□□□ -2
KRE33	YNL132W	CDC42	P19073	191 aa		2.57	□□□□□ -2
KRE33	YNL132W	MIH1	P23748	554 aa		2.57	□□□□□ -2
KRE33	YNL132W	ACP1	P32463	125 aa		2.57	□□□□□ -2
KRE33	YNL132W	UBP11	P36026	717 aa		2.57	□□□□□ -2
KRE33	YNL132W	ERT1	P38140	529 aa		2.57	□□□□□ -2
KRE33	YNL132W	PEX32	P38292	413 aa		2.57	□□□□□ -2
KRE33	YNL132W	GND1	P38720	489 aa	Known RBP	2.57	□□□□□ -2
KRE33	YNL132W	RAD55	P38953	406 aa		2.57	□□□□□ -2
KRE33	YNL132W	XDJ1	P39102	459 aa		2.57	□□□□□ -2
KRE33	YNL132W	YIR014W	P40570	242 aa		2.57	□□□□□ -2
KRE33	YNL132W	XKS1	P42826	600 aa		2.57	□□□□□ -2
KRE33	YNL132W	PFD1	P46988	109 aa		2.57	□□□□□ -2
KRE33	YNL132W	YGR273C	P53329	174 aa		2.57	□□□□□ -2
KRE33	YNL132W	RET3	P53600	189 aa		2.57	□□□□□ -2
KRE33	YNL132W	JJJ1	P53863	590 aa		2.57	□□□□□ -2
KRE33	YNL132W	VPS9	P54787	451 aa		2.57	□□□□□ -2
KRE33	YNL132W	YPL107W	Q02873	248 aa		2.57	□□□□□ -2
KRE33	YNL132W	FCP1	Q03254	732 aa		2.57	□□□□□ -2
KRE33	YNL132W	STE20	Q03497	939 aa	Known RBP	2.57	□□□□□ -2
KRE33	YNL132W	YDR338C	Q05497	695 aa		2.57	□□□□□ -2
KRE33	YNL132W	FRA1	Q07825	749 aa		2.57	□□□□□ -2
KRE33	YNL132W	SLK19	Q08581	821 aa	Known RBP	2.57	□□□□□ -2
KRE33	YNL132W	SFI1	Q12369	946 aa		2.57	□□□□□ -2
KRE33	YNL132W	PDH1	Q12428	516 aa	Known RBP	2.57	□□□□□ -2
KRE33	YNL132W	TOR1	P35169	2470 aa		2.57	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms