RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W SSB1P11484 613 aaKnown RBP1.94□□□□□ -2.1
RTP1YMR185W APL1P27351 700 aa1.94□□□□□ -2.1
RTP1YMR185W EUG1P32474 517 aa1.94□□□□□ -2.1
RTP1YMR185W YME1P32795 747 aa1.94□□□□□ -2.1
RTP1YMR185W UBC6P33296 250 aaPredicted RBP1.94□□□□□ -2.1
RTP1YMR185W CBF5P33322 483 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
RTP1YMR185W HEL1P36113 551 aa1.94□□□□□ -2.1
RTP1YMR185W HEK2P38199 381 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
RTP1YMR185W SET5P38890 526 aaKnown RBP1.94□□□□□ -2.1
RTP1YMR185W STT3P39007 718 aaKnown RBP1.94□□□□□ -2.1
RTP1YMR185W SAP1P39955 897 aaKnown RBP1.94□□□□□ -2.1
RTP1YMR185W SSB2P40150 613 aaKnown RBP1.94□□□□□ -2.1
RTP1YMR185W IES1P43579 692 aa1.94□□□□□ -2.1
RTP1YMR185W CWC22P53333 577 aaKnown RBP1.94□□□□□ -2.1
RTP1YMR185W YNR063WP53749 607 aa1.94□□□□□ -2.1
RTP1YMR185W SUB1P54000 292 aaKnown RBP1.94□□□□□ -2.1
RTP1YMR185W EAR1Q03212 550 aa1.94□□□□□ -2.1
RTP1YMR185W BSC2Q05611 235 aa1.94□□□□□ -2.1
RTP1YMR185W YLR177WQ06251 628 aa1.94□□□□□ -2.1
RTP1YMR185W PMT7Q06644 662 aa1.94□□□□□ -2.1
RTP1YMR185W TCO89Q08921 799 aa1.94□□□□□ -2.1
RTP1YMR185W NYV1Q12255 253 aa1.94□□□□□ -2.1
RTP1YMR185W CMR1Q12510 522 aaKnown RBP1.94□□□□□ -2.1
RTP1YMR185W FLO11P08640 1367 aa1.94□□□□□ -2.1
RTP1YMR185W CHO2P05374 869 aaKnown RBP1.94□□□□□ -2.1
RTP1YMR185W HVG1P0CE11 249 aa1.94□□□□□ -2.1
RTP1YMR185W PEP5P12868 1029 aa1.94□□□□□ -2.1
RTP1YMR185W THR4P16120 514 aaKnown RBP1.94□□□□□ -2.1
RTP1YMR185W TUP1P16649 713 aa1.94□□□□□ -2.1
RTP1YMR185W RAD51P25454 400 aa1.94□□□□□ -2.1
RTP1YMR185W YCR015CP25616 317 aa1.94□□□□□ -2.1
RTP1YMR185W CDC60P26637 1090 aaKnown RBP1.94□□□□□ -2.1
RTP1YMR185W AIM26P32858 118 aa1.94□□□□□ -2.1
RTP1YMR185W SMY2P32909 740 aaKnown RBP1.94□□□□□ -2.1
RTP1YMR185W YKR018CP36114 725 aa1.94□□□□□ -2.1
RTP1YMR185W YKR075CP36155 307 aa1.94□□□□□ -2.1
RTP1YMR185W ERG7P38604 731 aa1.94□□□□□ -2.1
RTP1YMR185W HSE1P38753 452 aa1.94□□□□□ -2.1
RTP1YMR185W SHU2P38957 223 aa1.94□□□□□ -2.1
RTP1YMR185W RRP8P38961 392 aaKnown RBP1.94□□□□□ -2.1
RTP1YMR185W YIL001WP40560 513 aa1.94□□□□□ -2.1
RTP1YMR185W VPS53P47061 822 aa1.94□□□□□ -2.1
RTP1YMR185W CCM1P48237 864 aaPredicted RBP1.94□□□□□ -2.1
RTP1YMR185W UBA2P52488 636 aa1.94□□□□□ -2.1
RTP1YMR185W YGR021WP53212 290 aa1.94□□□□□ -2.1
RTP1YMR185W YGR045CP53229 120 aa1.94□□□□□ -2.1
RTP1YMR185W SDA1P53313 767 aaKnown RBP1.94□□□□□ -2.1
RTP1YMR185W ADA2Q02336 434 aa1.94□□□□□ -2.1
RTP1YMR185W UME1Q03010 460 aa1.94□□□□□ -2.1
RTP1YMR185W SOV1Q04748 898 aa1.94□□□□□ -2.1
RTP1YMR185W YDR341CQ05506 607 aaKnown RBP1.94□□□□□ -2.1
RTP1YMR185W IRC3Q06683 689 aa1.94□□□□□ -2.1
RTP1YMR185W APL5Q08951 932 aaKnown RBP1.94□□□□□ -2.1
RTP1YMR185W YVC1Q12324 675 aa1.94□□□□□ -2.1
RTP1YMR185W RAD61Q99359 647 aa1.94□□□□□ -2.1
RTP1YMR185W ISY1P21374 235 aaPredicted RBP1.93□□□□□ -2.1
RTP1YMR185W RPC53P25441 422 aa1.93□□□□□ -2.1
RTP1YMR185W SEC20P28791 383 aa1.93□□□□□ -2.1
RTP1YMR185W TFC3P34111 1160 aa1.93□□□□□ -2.1
RTP1YMR185W OAF3P36023 863 aa1.93□□□□□ -2.1
RTP1YMR185W YHL050CP38721 697 aa1.93□□□□□ -2.1
RTP1YMR185W AXL1P40851 1208 aa1.93□□□□□ -2.1
RTP1YMR185W SAP185P40856 1058 aa1.93□□□□□ -2.1
RTP1YMR185W TMA22P47089 198 aaPredicted RBP1.93□□□□□ -2.1
RTP1YMR185W KAP114P53067 1004 aa1.93□□□□□ -2.1
RTP1YMR185W INP2Q03824 705 aa1.93□□□□□ -2.1
RTP1YMR185W TMA64Q04600 565 aaKnown RBP1.93□□□□□ -2.1
RTP1YMR185W FUS2Q05670 677 aa1.93□□□□□ -2.1
RTP1YMR185W PIG1Q06216 648 aa1.93□□□□□ -2.1
RTP1YMR185W CDA2Q06703 312 aa1.93□□□□□ -2.1
RTP1YMR185W YPR078CQ06813 372 aa1.93□□□□□ -2.1
RTP1YMR185W HIF1Q12373 385 aa1.93□□□□□ -2.1
RTP1YMR185W YOR111WQ99210 232 aa1.93□□□□□ -2.1
RTP1YMR185W ARG4P04076 463 aaPredicted RBP1.93□□□□□ -2.1
RTP1YMR185W ERG11P10614 530 aa1.93□□□□□ -2.1
RTP1YMR185W VMA4P22203 233 aaKnown RBP1.93□□□□□ -2.1
RTP1YMR185W SRO9P25567 434 aaKnown RBP1.93□□□□□ -2.1
RTP1YMR185W ILV6P25605 309 aaKnown RBP1.93□□□□□ -2.1
RTP1YMR185W BUD14P27637 709 aa1.93□□□□□ -2.1
RTP1YMR185W SWE1P32944 819 aa1.93□□□□□ -2.1
RTP1YMR185W YKL091CP33324 310 aaKnown RBP1.93□□□□□ -2.1
RTP1YMR185W NNK1P36003 928 aa1.93□□□□□ -2.1
RTP1YMR185W NUP82P40368 713 aa1.93□□□□□ -2.1
RTP1YMR185W CSM2P40465 213 aa1.93□□□□□ -2.1
RTP1YMR185W HOS4P40480 1083 aa1.93□□□□□ -2.1
RTP1YMR185W GSC2P40989 1895 aa1.93□□□□□ -2.1
RTP1YMR185W TDA10P42938 290 aa1.93□□□□□ -2.1
RTP1YMR185W ALT1P52893 592 aa1.93□□□□□ -2.1
RTP1YMR185W LSC1P53598 329 aaKnown RBP1.93□□□□□ -2.1
RTP1YMR185W TOF1P53840 1238 aa1.93□□□□□ -2.1
RTP1YMR185W ESBP6P53918 673 aa1.93□□□□□ -2.1
RTP1YMR185W RAT1Q02792 1006 aaKnown RBP1.93□□□□□ -2.1
RTP1YMR185W TFB2Q02939 513 aa1.93□□□□□ -2.1
RTP1YMR185W MTG1Q03151 367 aaPredicted RBP1.93□□□□□ -2.1
RTP1YMR185W URH1Q04179 340 aa1.93□□□□□ -2.1
RTP1YMR185W UBX2Q04228 584 aa1.93□□□□□ -2.1
RTP1YMR185W YMR114CQ04471 368 aaKnown RBP1.93□□□□□ -2.1
RTP1YMR185W ERV41Q04651 352 aa1.93□□□□□ -2.1
RTP1YMR185W RRP15Q06511 250 aaPredicted RBP1.93□□□□□ -2.1
RTP1YMR185W IMH1Q06704 911 aaKnown RBP1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 35.2 ms