RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C TSL1P38427 1098 aaKnown RBP5.55□□□□□ -1.52
CCS1YMR038C YNG2P38806 282 aaKnown RBP5.55□□□□□ -1.52
CCS1YMR038C YAP1801P38856 637 aa5.55□□□□□ -1.52
CCS1YMR038C CCC2P38995 1004 aa5.55□□□□□ -1.52
CCS1YMR038C VID30P53076 958 aa5.55□□□□□ -1.52
CCS1YMR038C MRPL22P53881 309 aa5.55□□□□□ -1.52
CCS1YMR038C MSC2Q03455 724 aa5.55□□□□□ -1.52
CCS1YMR038C GAL10P04397 699 aa5.54□□□□□ -1.52
CCS1YMR038C KIN2P13186 1147 aaKnown RBP5.54□□□□□ -1.52
CCS1YMR038C CMP2P14747 604 aa5.54□□□□□ -1.52
CCS1YMR038C FUN30P31380 1131 aa5.54□□□□□ -1.52
CCS1YMR038C YBR284WP38150 797 aa5.54□□□□□ -1.52
CCS1YMR038C PBP2P38151 413 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
CCS1YMR038C NOC2P39744 710 aaKnown RBP5.54□□□□□ -1.52
CCS1YMR038C YIL092WP40497 633 aa5.54□□□□□ -1.52
CCS1YMR038C BUD6P41697 788 aa5.54□□□□□ -1.52
CCS1YMR038C SKP2P42843 763 aa5.54□□□□□ -1.52
CCS1YMR038C SPO1P53541 631 aa5.54□□□□□ -1.52
CCS1YMR038C SNO2P53823 222 aa5.54□□□□□ -1.52
CCS1YMR038C SFB2P53953 876 aa5.54□□□□□ -1.52
CCS1YMR038C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52 RIP-Chip
CCS1YMR038C YML037CQ03703 340 aa5.54□□□□□ -1.52
CCS1YMR038C CDA2Q06703 312 aa5.54□□□□□ -1.52
CCS1YMR038C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
CCS1YMR038C DAP1Q12091 152 aa5.54□□□□□ -1.52
CCS1YMR038C OSW2Q12202 724 aa5.54□□□□□ -1.52
CCS1YMR038C RVB2Q12464 471 aaKnown RBP5.54□□□□□ -1.52
CCS1YMR038C TOR2P32600 2474 aaKnown RBP5.54□□□□□ -1.52
CCS1YMR038C TOP3P13099 656 aa5.53□□□□□ -1.52
CCS1YMR038C BET3P36149 193 aa5.53□□□□□ -1.52
CCS1YMR038C YRO2P38079 344 aa5.53□□□□□ -1.52
CCS1YMR038C RTA1P53047 317 aa5.53□□□□□ -1.52
CCS1YMR038C TPO2P53283 614 aa5.53□□□□□ -1.52
CCS1YMR038C PLB2Q03674 706 aa5.53□□□□□ -1.52
CCS1YMR038C RTP1Q12751 981 aa5.53□□□□□ -1.52
CCS1YMR038C CYB2P00175 591 aa5.52□□□□□ -1.53
CCS1YMR038C ADE8P04161 214 aa5.52□□□□□ -1.53
CCS1YMR038C CAN1P04817 590 aa5.52□□□□□ -1.53
CCS1YMR038C MSD1P15179 658 aaKnown RBP5.52□□□□□ -1.53
CCS1YMR038C GAS1P22146 559 aaKnown RBP5.52□□□□□ -1.53
CCS1YMR038C GCD7P32502 381 aaPredicted RBP5.52□□□□□ -1.53
CCS1YMR038C ECM21P38167 1117 aaKnown RBP5.52□□□□□ -1.53
CCS1YMR038C TIF4631P39935 952 aaKnown RBP5.52□□□□□ -1.53
CCS1YMR038C YER158CP40095 573 aa5.52□□□□□ -1.53
CCS1YMR038C TOK1P40310 691 aa5.52□□□□□ -1.53
CCS1YMR038C AVT1P47082 602 aa5.52□□□□□ -1.53
CCS1YMR038C CDC45Q08032 650 aa5.52□□□□□ -1.53
CCS1YMR038C YPR071WQ12346 211 aa5.52□□□□□ -1.53
CCS1YMR038C FAB1P34756 2278 aa5.51□□□□□ -1.53
CCS1YMR038C GAL11P19659 1081 aa5.51□□□□□ -1.53
CCS1YMR038C CDC11P32458 415 aa5.51□□□□□ -1.53
CCS1YMR038C PET10P36139 283 aa5.51□□□□□ -1.53
CCS1YMR038C YKR078WP36158 585 aaKnown RBP5.51□□□□□ -1.53
CCS1YMR038C YBR238CP38330 731 aaKnown RBP5.51□□□□□ -1.53
CCS1YMR038C HUL4P40985 892 aa5.51□□□□□ -1.53
CCS1YMR038C YKE2P52553 114 aa5.51□□□□□ -1.53
CCS1YMR038C SLD5Q03406 294 aa5.51□□□□□ -1.53
CCS1YMR038C LCD1Q04377 747 aa5.51□□□□□ -1.53
CCS1YMR038C MYO1P08964 1928 aa5.5□□□□□ -1.53
CCS1YMR038C CIT2P08679 460 aa5.5□□□□□ -1.53
CCS1YMR038C PRE8P23639 250 aa5.5□□□□□ -1.53
CCS1YMR038C RNQ1P25367 405 aa5.5□□□□□ -1.53
CCS1YMR038C ELM1P32801 640 aa5.5□□□□□ -1.53
CCS1YMR038C GGA2P38817 585 aaKnown RBP5.5□□□□□ -1.53
CCS1YMR038C LAM1P38851 1228 aa5.5□□□□□ -1.53
CCS1YMR038C YMR147WP40218 223 aaKnown RBP5.5□□□□□ -1.53
CCS1YMR038C YGL242CP53066 181 aa5.5□□□□□ -1.53
CCS1YMR038C DAK1P54838 584 aaKnown RBP5.5□□□□□ -1.53
CCS1YMR038C ROT1Q03691 256 aa5.5□□□□□ -1.53
CCS1YMR038C ERR1P0CX10 437 aa5.49□□□□□ -1.53
CCS1YMR038C ERR2P0CX11 437 aa5.49□□□□□ -1.53
CCS1YMR038C CDC48P25694 835 aaKnown RBP5.49□□□□□ -1.53
CCS1YMR038C UTR4P32626 227 aa5.49□□□□□ -1.53
CCS1YMR038C SRP101P32916 621 aa5.49□□□□□ -1.53
CCS1YMR038C SGM1P47166 707 aa5.49□□□□□ -1.53
CCS1YMR038C VPS72Q03388 795 aa5.49□□□□□ -1.53
CCS1YMR038C YDR132CQ03900 495 aa5.49□□□□□ -1.53
CCS1YMR038C NCB2Q92317 146 aa5.49□□□□□ -1.53
CCS1YMR038C SAM2P19358 384 aaKnown RBP5.48□□□□□ -1.53
CCS1YMR038C TIM23P32897 222 aa5.48□□□□□ -1.53
CCS1YMR038C AIM3P38266 947 aaKnown RBP5.48□□□□□ -1.53
CCS1YMR038C MEF2P39677 819 aa5.48□□□□□ -1.53
CCS1YMR038C MND2P40577 368 aa5.48□□□□□ -1.53
CCS1YMR038C UBP6P43593 499 aaKnown RBP5.48□□□□□ -1.53
CCS1YMR038C PIB2P53191 635 aa5.48□□□□□ -1.53
CCS1YMR038C SOL4P53315 255 aa5.48□□□□□ -1.53
CCS1YMR038C FPR4Q06205 392 aaPredicted RBP5.48□□□□□ -1.53
CCS1YMR038C CDA1Q06702 301 aa5.48□□□□□ -1.53
CCS1YMR038C NOT3P06102 836 aaKnown RBP5.47□□□□□ -1.53
CCS1YMR038C CDC6P09119 513 aa5.47□□□□□ -1.53
CCS1YMR038C CHS3P29465 1165 aa5.47□□□□□ -1.53
CCS1YMR038C MCM4P30665 933 aaKnown RBP5.47□□□□□ -1.53
CCS1YMR038C RPC82P32349 654 aa5.47□□□□□ -1.53
CCS1YMR038C REC104P33323 182 aa5.47□□□□□ -1.53
CCS1YMR038C ZRG8P40021 1076 aa5.47□□□□□ -1.53
CCS1YMR038C IRC8P47046 822 aa5.47□□□□□ -1.53
CCS1YMR038C CCM1P48237 864 aaPredicted RBP5.47□□□□□ -1.53
CCS1YMR038C YGR012WP53206 393 aa5.47□□□□□ -1.53
CCS1YMR038C GCN5Q03330 439 aa5.47□□□□□ -1.53
CCS1YMR038C SKG3Q06315 1026 aa5.47□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms