RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W TDA3P38758 523 aa4.56□□□□□ -1.68
VPS38YLR360W SFB3P38810 929 aa4.56□□□□□ -1.68
VPS38YLR360W CRP1P38845 465 aaKnown RBP4.56□□□□□ -1.68
VPS38YLR360W FMO1P38866 432 aa4.56□□□□□ -1.68
VPS38YLR360W YHR202WP38887 602 aa4.56□□□□□ -1.68
VPS38YLR360W LYS9P38999 446 aa4.56□□□□□ -1.68
VPS38YLR360W NUP60P39705 539 aa4.56□□□□□ -1.68
VPS38YLR360W YJR096WP47137 282 aa4.56□□□□□ -1.68
VPS38YLR360W RIA1P53893 1110 aa4.56□□□□□ -1.68
VPS38YLR360W TMN2Q04562 672 aa4.56□□□□□ -1.68
VPS38YLR360W SGO1Q08490 590 aa4.56□□□□□ -1.68
VPS38YLR360W DCS2Q12123 353 aa4.56□□□□□ -1.68
VPS38YLR360W MAL31P38156 614 aa4.55□□□□□ -1.68
VPS38YLR360W CKB2P38930 258 aa4.55□□□□□ -1.68
VPS38YLR360W PAN2P53010 1115 aaPredicted RBP4.55□□□□□ -1.68
VPS38YLR360W GND2P53319 492 aa4.55□□□□□ -1.68
VPS38YLR360W YNR029CP53729 429 aaKnown RBP4.55□□□□□ -1.68
VPS38YLR360W YKL033W-AQ86ZR7 236 aa4.55□□□□□ -1.68
VPS38YLR360W ECM3Q99252 613 aa4.55□□□□□ -1.68
VPS38YLR360W NUP145P49687 1317 aa4.55□□□□□ -1.68
VPS38YLR360W AKL1P38080 1108 aaKnown RBP4.54□□□□□ -1.68
VPS38YLR360W GET2P40056 285 aa4.54□□□□□ -1.68
VPS38YLR360W GID8P40208 455 aa4.54□□□□□ -1.68
VPS38YLR360W YJR039WP47107 1121 aa4.54□□□□□ -1.68
VPS38YLR360W PMT3P47190 753 aa4.54□□□□□ -1.68
VPS38YLR360W TEL2P53038 688 aa4.54□□□□□ -1.68
VPS38YLR360W SSL2Q00578 843 aa4.54□□□□□ -1.68
VPS38YLR360W DIA2Q08496 732 aaPredicted RBP4.54□□□□□ -1.68
VPS38YLR360W MTH1P35198 433 aa4.53□□□□□ -1.68
VPS38YLR360W SPC42P36094 363 aa4.53□□□□□ -1.68
VPS38YLR360W NUG1P40010 520 aaKnown RBP4.53□□□□□ -1.68
VPS38YLR360W RET2P43621 546 aa4.53□□□□□ -1.68
VPS38YLR360W NOP9P47077 666 aaKnown RBP4.53□□□□□ -1.68
VPS38YLR360W UME1Q03010 460 aa4.53□□□□□ -1.68
VPS38YLR360W HMO1Q03973 246 aaKnown RBP4.53□□□□□ -1.68
VPS38YLR360W HRB1P38922 454 aaKnown RBP RIP-Chip data4.52□□□□□ -1.69not detected
VPS38YLR360W SDS3P40505 327 aa4.52□□□□□ -1.69
VPS38YLR360W RSC8P43609 557 aaKnown RBP4.52□□□□□ -1.69
VPS38YLR360W STU2P46675 888 aa4.52□□□□□ -1.69
VPS38YLR360W YGR153WP48238 217 aa4.52□□□□□ -1.69
VPS38YLR360W YAP1802P53309 568 aa4.52□□□□□ -1.69
VPS38YLR360W MTQ2Q03920 221 aaPredicted RBP4.52□□□□□ -1.69
VPS38YLR360W RGC1Q06108 1083 aaKnown RBP4.52□□□□□ -1.69
VPS38YLR360W VHS3Q08438 674 aa4.52□□□□□ -1.69
VPS38YLR360W ZRT2Q12436 422 aa4.52□□□□□ -1.69
VPS38YLR360W PEX1P24004 1043 aa4.51□□□□□ -1.69
VPS38YLR360W PHO11P35842 467 aa4.51□□□□□ -1.69
VPS38YLR360W PHO12P38693 467 aa4.51□□□□□ -1.69
VPS38YLR360W YGR237CP50089 785 aa4.51□□□□□ -1.69
VPS38YLR360W YMR210WQ03649 449 aa4.51□□□□□ -1.69
VPS38YLR360W GIS1Q03833 894 aa4.51□□□□□ -1.69
VPS38YLR360W MRH1Q12117 320 aaPredicted RBP4.51□□□□□ -1.69
VPS38YLR360W SIR3P06701 978 aa4.5□□□□□ -1.69
VPS38YLR360W CDC43P18898 376 aa4.5□□□□□ -1.69
VPS38YLR360W KIN3P22209 435 aa4.5□□□□□ -1.69
VPS38YLR360W IMG2P25642 146 aaPredicted RBP4.5□□□□□ -1.69
VPS38YLR360W YLR407WQ06070 228 aa4.5□□□□□ -1.69
VPS38YLR360W IRC10Q08118 586 aa4.5□□□□□ -1.69
VPS38YLR360W FAP7Q12055 197 aaPredicted RBP4.5□□□□□ -1.69
VPS38YLR360W SEC15P22224 910 aa4.49□□□□□ -1.69
VPS38YLR360W BEM4P39011 633 aa4.49□□□□□ -1.69
VPS38YLR360W DOS2P54858 310 aa4.49□□□□□ -1.69
VPS38YLR360W HFD1Q04458 532 aa4.49□□□□□ -1.69
VPS38YLR360W VPS36Q06696 566 aa4.49□□□□□ -1.69
VPS38YLR360W MLH3Q12083 715 aa4.49□□□□□ -1.69
VPS38YLR360W ERG20P08524 352 aaKnown RBP4.48□□□□□ -1.69
VPS38YLR360W FRS1P15624 595 aaKnown RBP4.48□□□□□ -1.69
VPS38YLR360W BCS1P32839 456 aa4.48□□□□□ -1.69
VPS38YLR360W NDC80P40460 691 aa4.48□□□□□ -1.69
VPS38YLR360W GZF3P42944 551 aaKnown RBP4.48□□□□□ -1.69
VPS38YLR360W FHN1P53279 174 aa4.48□□□□□ -1.69
VPS38YLR360W SMX3P54999 86 aaPredicted RBP4.48□□□□□ -1.69
VPS38YLR360W THI22Q06490 572 aa4.48□□□□□ -1.69
VPS38YLR360W YTM1Q12024 460 aaPredicted RBP4.48□□□□□ -1.69
VPS38YLR360W RPS9BP05755 195 aaKnown RBP4.47□□□□□ -1.69
VPS38YLR360W PET127P32606 800 aa4.47□□□□□ -1.69
VPS38YLR360W YKU70P32807 602 aa4.47□□□□□ -1.69
VPS38YLR360W PIG2P40187 538 aa4.47□□□□□ -1.69
VPS38YLR360W CCT5P40413 562 aaKnown RBP4.47□□□□□ -1.69
VPS38YLR360W CTR1P49573 406 aa4.47□□□□□ -1.69
VPS38YLR360W GPG1P53130 126 aa4.47□□□□□ -1.69
VPS38YLR360W ECM9Q02202 377 aa4.47□□□□□ -1.69
VPS38YLR360W YHM2Q04013 314 aa4.47□□□□□ -1.69
VPS38YLR360W VBA4Q04602 768 aaKnown RBP4.47□□□□□ -1.69
VPS38YLR360W USV1Q12132 391 aa4.47□□□□□ -1.69
VPS38YLR360W CLF1Q12309 687 aaPredicted RBP4.47□□□□□ -1.69
VPS38YLR360W RPS21BQ3E754 87 aaKnown RBP4.47□□□□□ -1.69
VPS38YLR360W SEC65P29478 273 aa4.46□□□□□ -1.69
VPS38YLR360W YJL206CP39529 758 aa4.46□□□□□ -1.69
VPS38YLR360W OAF1P39720 1047 aaPredicted RBP4.46□□□□□ -1.69
VPS38YLR360W YIL077CP40508 320 aa4.46□□□□□ -1.69
VPS38YLR360W GPP1P41277 250 aaKnown RBP4.46□□□□□ -1.69
VPS38YLR360W QRI1P43123 477 aaKnown RBP4.46□□□□□ -1.69
VPS38YLR360W POM34Q12445 299 aa4.46□□□□□ -1.69
VPS38YLR360W THR1P17423 357 aaKnown RBP4.46□□□□□ -1.7
VPS38YLR360W FEN2P25621 512 aaKnown RBP4.46□□□□□ -1.7
VPS38YLR360W GLG1P36143 616 aa4.46□□□□□ -1.7
VPS38YLR360W COS111P38308 924 aa4.46□□□□□ -1.7
VPS38YLR360W TDP1P38319 544 aa4.46□□□□□ -1.7
VPS38YLR360W BIT2P38346 545 aa4.46□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms