RNA–Protein interactions for RNA: YLR170C

APS1, Transcript of Small subunit of the clathrin-associated adaptor complex AP-1, yeast

Gene APS1, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APS1	YLR170C	HFM1	P51979	1187 aa		5.12	□□□□□ -1.59
APS1	YLR170C	YNL134C	P53912	376 aa	Known RBP	5.12	□□□□□ -1.59
APS1	YLR170C	EAR1	Q03212	550 aa		5.12	□□□□□ -1.59
APS1	YLR170C	YPL216W	Q08964	1102 aa		5.12	□□□□□ -1.59
APS1	YLR170C	SGT2	Q12118	346 aa	Known RBP	5.12	□□□□□ -1.59
APS1	YLR170C	CDC37	P06101	506 aa	Known RBP	5.11	□□□□□ -1.59
APS1	YLR170C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	5.11	□□□□□ -1.59	not detected
APS1	YLR170C	TOM70	P07213	617 aa	Known RBP	5.11	□□□□□ -1.59
APS1	YLR170C	SWI6	P09959	803 aa		5.11	□□□□□ -1.59
APS1	YLR170C	CLC1	P17891	233 aa		5.11	□□□□□ -1.59
APS1	YLR170C	CDC42	P19073	191 aa		5.11	□□□□□ -1.59
APS1	YLR170C	SAP190	P36123	1033 aa		5.11	□□□□□ -1.59
APS1	YLR170C	VID24	P38263	362 aa		5.11	□□□□□ -1.59
APS1	YLR170C	MIP6	P38760	659 aa	Known RBP	5.11	□□□□□ -1.59
APS1	YLR170C	FTR1	P40088	404 aa		5.11	□□□□□ -1.59
APS1	YLR170C	COS5	P47187	383 aa		5.11	□□□□□ -1.59
APS1	YLR170C	ESBP6	P53918	673 aa		5.11	□□□□□ -1.59
APS1	YLR170C	TIM8	P57744	87 aa		5.11	□□□□□ -1.59
APS1	YLR170C	RPA49	Q01080	415 aa	Predicted RBP	5.11	□□□□□ -1.59
APS1	YLR170C	SKY1	Q03656	742 aa		5.11	□□□□□ -1.59
APS1	YLR170C	PPM1	Q04081	328 aa		5.11	□□□□□ -1.59
APS1	YLR170C	YLR297W	Q05899	129 aa		5.11	□□□□□ -1.59
APS1	YLR170C	NEW1	Q08972	1196 aa	Known RBP	5.11	□□□□□ -1.59
APS1	YLR170C	MOT1	P32333	1867 aa		5.11	□□□□□ -1.59
APS1	YLR170C	RIF1	P29539	1916 aa		5.11	□□□□□ -1.59
APS1	YLR170C	RPS6A	P0CX37	236 aa	Known RBP	5.1	□□□□□ -1.59
APS1	YLR170C	RPS6B	P0CX38	236 aa	Predicted RBP	5.1	□□□□□ -1.59
APS1	YLR170C	CHS2	P14180	963 aa		5.1	□□□□□ -1.59
APS1	YLR170C	POL3	P15436	1097 aa		5.1	□□□□□ -1.59
APS1	YLR170C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.1	□□□□□ -1.59	not detected
APS1	YLR170C	KIP1	P28742	1111 aa		5.1	□□□□□ -1.59
APS1	YLR170C	DRE2	P36152	348 aa		5.1	□□□□□ -1.59
APS1	YLR170C	MRPL7	P36519	292 aa		5.1	□□□□□ -1.59
APS1	YLR170C	YHR054C	P38780	354 aa		5.1	□□□□□ -1.59
APS1	YLR170C	BUD16	P39988	312 aa		5.1	□□□□□ -1.59
APS1	YLR170C	VFA1	P40080	203 aa		5.1	□□□□□ -1.59
APS1	YLR170C	INP51	P40559	946 aa	Known RBP	5.1	□□□□□ -1.59
APS1	YLR170C	OPT1	P40897	799 aa		5.1	□□□□□ -1.59
APS1	YLR170C	LAM5	P43560	674 aa		5.1	□□□□□ -1.59
APS1	YLR170C	HSH155	P49955	971 aa	Known RBP	5.1	□□□□□ -1.59
APS1	YLR170C	VPS75	P53853	264 aa		5.1	□□□□□ -1.59
APS1	YLR170C	UTP14	Q04500	899 aa	Known RBP	5.1	□□□□□ -1.59
APS1	YLR170C	MAG2	Q06436	670 aa	Known RBP	5.1	□□□□□ -1.59
APS1	YLR170C	CSR1	Q06705	408 aa	Known RBP	5.1	□□□□□ -1.59
APS1	YLR170C	PLP2	Q12017	286 aa		5.1	□□□□□ -1.59
APS1	YLR170C	MCM16	Q12262	181 aa		5.1	□□□□□ -1.59
APS1	YLR170C	ZPS1	Q12512	249 aa		5.1	□□□□□ -1.59
APS1	YLR170C	ASP3-2	P0CX77	362 aa		5.09	□□□□□ -1.59
APS1	YLR170C	ASP3-3	P0CX78	362 aa		5.09	□□□□□ -1.59
APS1	YLR170C	ASP3-4	P0CX79	362 aa		5.09	□□□□□ -1.59
APS1	YLR170C	ASP3-1	P0CZ17	362 aa		5.09	□□□□□ -1.59
APS1	YLR170C	TUP1	P16649	713 aa		5.09	□□□□□ -1.59
APS1	YLR170C	COX11	P19516	300 aa	Known RBP	5.09	□□□□□ -1.59
APS1	YLR170C	CAD1	P24813	409 aa	Known RBP	5.09	□□□□□ -1.59
APS1	YLR170C	RSA4	P25382	515 aa	Known RBP	5.09	□□□□□ -1.59
APS1	YLR170C	PEP7	P32609	515 aa		5.09	□□□□□ -1.59
APS1	YLR170C	TRM2	P33753	639 aa		5.09	□□□□□ -1.59
APS1	YLR170C	ALG14	P38242	237 aa		5.09	□□□□□ -1.59
APS1	YLR170C	ESL1	P40456	1118 aa		5.09	□□□□□ -1.59
APS1	YLR170C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	5.09	□□□□□ -1.59	not detected
APS1	YLR170C	PUS2	P53167	370 aa		5.09	□□□□□ -1.59
APS1	YLR170C	GIR2	Q03768	265 aa	Predicted RBP	5.09	□□□□□ -1.59
APS1	YLR170C	YLR455W	Q06188	304 aa		5.09	□□□□□ -1.59
APS1	YLR170C	MLH2	Q07980	695 aa		5.09	□□□□□ -1.59
APS1	YLR170C	DNL4	Q08387	944 aa	Predicted RBP	5.09	□□□□□ -1.59
APS1	YLR170C	CWC2	Q12046	339 aa	Predicted RBP	5.09	□□□□□ -1.59
APS1	YLR170C	YOR022C	Q12204	715 aa		5.09	□□□□□ -1.59
APS1	YLR170C	CTF3	Q12748	733 aa		5.09	□□□□□ -1.59
APS1	YLR170C	NHA1	Q99271	985 aa		5.09	□□□□□ -1.59
APS1	YLR170C	ADE4	P04046	510 aa	Known RBP	5.08	□□□□□ -1.6
APS1	YLR170C	TPK1	P06244	397 aa		5.08	□□□□□ -1.6
APS1	YLR170C	LEU1	P07264	779 aa	Known RBP	5.08	□□□□□ -1.6
APS1	YLR170C	RPL4A	P10664	362 aa	Known RBP	5.08	□□□□□ -1.6
APS1	YLR170C	MSD1	P15179	658 aa	Known RBP	5.08	□□□□□ -1.6
APS1	YLR170C	PRR1	P28708	518 aa		5.08	□□□□□ -1.6
APS1	YLR170C	SWI3	P32591	825 aa		5.08	□□□□□ -1.6
APS1	YLR170C	YKL023W	P36103	277 aa	Known RBP	5.08	□□□□□ -1.6
APS1	YLR170C	YKR073C	P36153	106 aa		5.08	□□□□□ -1.6
APS1	YLR170C	JHD1	P40034	492 aa		5.08	□□□□□ -1.6
APS1	YLR170C	RSC8	P43609	557 aa	Known RBP	5.08	□□□□□ -1.6
APS1	YLR170C	RPL4B	P49626	362 aa	Known RBP	5.08	□□□□□ -1.6
APS1	YLR170C	TAD1	P53065	400 aa		5.08	□□□□□ -1.6
APS1	YLR170C	ALG11	P53954	548 aa	Known RBP	5.08	□□□□□ -1.6
APS1	YLR170C	CTR9	P89105	1077 aa		5.08	□□□□□ -1.6
APS1	YLR170C	HDA3	Q06623	655 aa		5.08	□□□□□ -1.6
APS1	YLR170C	SPO75	Q07798	868 aa		5.08	□□□□□ -1.6
APS1	YLR170C	HMI1	Q12039	706 aa		5.08	□□□□□ -1.6
APS1	YLR170C	RPS3	P05750	240 aa	Known RBP	5.07	□□□□□ -1.6
APS1	YLR170C	PPR1	P07272	904 aa	Predicted RBP	5.07	□□□□□ -1.6
APS1	YLR170C	IME1	P21190	360 aa		5.07	□□□□□ -1.6
APS1	YLR170C	CDC11	P32458	415 aa		5.07	□□□□□ -1.6
APS1	YLR170C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	not detected
APS1	YLR170C	RPC25	P35718	212 aa		5.07	□□□□□ -1.6
APS1	YLR170C	KDX1	P36005	433 aa		5.07	□□□□□ -1.6
APS1	YLR170C	EBP2	P36049	427 aa	Known RBP	5.07	□□□□□ -1.6
APS1	YLR170C	YMC2	P38087	329 aa		5.07	□□□□□ -1.6
APS1	YLR170C	YHR202W	P38887	602 aa		5.07	□□□□□ -1.6
APS1	YLR170C	CCC2	P38995	1004 aa		5.07	□□□□□ -1.6
APS1	YLR170C	SAH1	P39954	449 aa	Known RBP	5.07	□□□□□ -1.6
APS1	YLR170C	YFL052W	P43551	465 aa		5.07	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms