RNA–Protein interactions for RNA: YKR097W

PCK1, Transcript of Phosphoenolpyruvate carboxykinase, yeast

Gene PCK1, Length 1,650 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCK1	YKR097W	PTA1	Q01329	785 aa	Predicted RBP	3.59	□□□□□ -1.84
PCK1	YKR097W	SKY1	Q03656	742 aa		3.59	□□□□□ -1.84
PCK1	YKR097W	MCM21	Q06675	368 aa		3.59	□□□□□ -1.84
PCK1	YKR097W	ERG6	P25087	383 aa	Known RBP	3.58	□□□□□ -1.84
PCK1	YKR097W	IMG2	P25642	146 aa	Predicted RBP	3.58	□□□□□ -1.84
PCK1	YKR097W	HEM12	P32347	362 aa	Predicted RBP	3.58	□□□□□ -1.84
PCK1	YKR097W	YKU70	P32807	602 aa		3.58	□□□□□ -1.84
PCK1	YKR097W	YPT7	P32939	208 aa		3.58	□□□□□ -1.84
PCK1	YKR097W	SER1	P33330	395 aa	Known RBP	3.58	□□□□□ -1.84
PCK1	YKR097W	YKR075C	P36155	307 aa		3.58	□□□□□ -1.84
PCK1	YKR097W	YJR008W	P47085	338 aa		3.58	□□□□□ -1.84
PCK1	YKR097W	BFA1	P47113	574 aa		3.58	□□□□□ -1.84
PCK1	YKR097W	PHO23	P50947	330 aa		3.58	□□□□□ -1.84
PCK1	YKR097W	NOP15	P53927	220 aa	Predicted RBP	3.58	□□□□□ -1.84
PCK1	YKR097W	SND1	Q04007	877 aa		3.58	□□□□□ -1.84
PCK1	YKR097W	ISA1	Q07821	250 aa	Predicted RBP	3.58	□□□□□ -1.84
PCK1	YKR097W	ATP12	P22135	325 aa		3.57	□□□□□ -1.84
PCK1	YKR097W	PMI40	P29952	429 aa	Known RBP	3.57	□□□□□ -1.84
PCK1	YKR097W	TRZ1	P36159	838 aa	Predicted RBP	3.57	□□□□□ -1.84
PCK1	YKR097W	BAP3	P41815	604 aa		3.57	□□□□□ -1.84
PCK1	YKR097W	MSE1	P48525	536 aa		3.57	□□□□□ -1.84
PCK1	YKR097W	AMA1	P50082	593 aa		3.57	□□□□□ -1.84
PCK1	YKR097W	YPS7	Q06325	596 aa		3.57	□□□□□ -1.84
PCK1	YKR097W	PUS9	Q12069	462 aa		3.57	□□□□□ -1.84
PCK1	YKR097W	NTO1	Q12311	748 aa		3.57	□□□□□ -1.84
PCK1	YKR097W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.57	□□□□□ -1.84	not detected
PCK1	YKR097W	TMA7	Q3E764	64 aa	Known RBP	3.57	□□□□□ -1.84
PCK1	YKR097W	HRP1	Q99383	534 aa	Known RBP	3.57	□□□□□ -1.84
PCK1	YKR097W	PYC1	P11154	1178 aa	Known RBP	3.56	□□□□□ -1.84
PCK1	YKR097W	GLN4	P13188	809 aa	Known RBP	3.56	□□□□□ -1.84
PCK1	YKR097W	CDC26	P14724	124 aa		3.56	□□□□□ -1.84
PCK1	YKR097W	RNR1	P21524	888 aa	Known RBP	3.56	□□□□□ -1.84
PCK1	YKR097W	HOS4	P40480	1083 aa		3.56	□□□□□ -1.84
PCK1	YKR097W	SPC105	P53148	917 aa		3.56	□□□□□ -1.84
PCK1	YKR097W	YNL034W	P53963	612 aa		3.56	□□□□□ -1.84
PCK1	YKR097W	YNL018C	P53976	612 aa		3.56	□□□□□ -1.84
PCK1	YKR097W	YMR210W	Q03649	449 aa		3.56	□□□□□ -1.84
PCK1	YKR097W	DLT1	Q04216	342 aa		3.56	□□□□□ -1.84
PCK1	YKR097W	GAD1	Q04792	585 aa		3.56	□□□□□ -1.84
PCK1	YKR097W	YOL057W	Q08225	711 aa		3.56	□□□□□ -1.84
PCK1	YKR097W	VHS3	Q08438	674 aa		3.56	□□□□□ -1.84
PCK1	YKR097W	TRM13	Q12383	476 aa		3.56	□□□□□ -1.84
PCK1	YKR097W	ATG11	Q12527	1178 aa		3.56	□□□□□ -1.84
PCK1	YKR097W	LAT1	P12695	482 aa	Known RBP	3.55	□□□□□ -1.84
PCK1	YKR097W	COX11	P19516	300 aa	Known RBP	3.55	□□□□□ -1.84
PCK1	YKR097W	IME1	P21190	360 aa		3.55	□□□□□ -1.84
PCK1	YKR097W	PET127	P32606	800 aa		3.55	□□□□□ -1.84
PCK1	YKR097W	DEF1	P35732	738 aa	Known RBP	3.55	□□□□□ -1.84
PCK1	YKR097W	APT2	P36973	181 aa		3.55	□□□□□ -1.84
PCK1	YKR097W	YBR053C	P38235	358 aa		3.55	□□□□□ -1.84
PCK1	YKR097W	AIM21	P40563	679 aa		3.55	□□□□□ -1.84
PCK1	YKR097W	YIR042C	P40586	236 aa		3.55	□□□□□ -1.84
PCK1	YKR097W	IES1	P43579	692 aa		3.55	□□□□□ -1.84
PCK1	YKR097W	NOP9	P47077	666 aa	Known RBP	3.55	□□□□□ -1.84
PCK1	YKR097W	MUP1	P50276	574 aa		3.55	□□□□□ -1.84
PCK1	YKR097W	SLD3	P53135	668 aa		3.55	□□□□□ -1.84
PCK1	YKR097W	RCR2	Q03446	210 aa	Known RBP	3.55	□□□□□ -1.84
PCK1	YKR097W	STP4	Q07351	490 aa		3.55	□□□□□ -1.84
PCK1	YKR097W	YPR027C	Q12079	277 aa		3.55	□□□□□ -1.84
PCK1	YKR097W	SLX4	Q12098	748 aa		3.55	□□□□□ -1.84
PCK1	YKR097W	RPS17A	P02407	136 aa	Known RBP	3.55	□□□□□ -1.84
PCK1	YKR097W	CAF20	P12962	161 aa	Known RBP	3.55	□□□□□ -1.84
PCK1	YKR097W	RPS17B	P14127	136 aa	Known RBP	3.55	□□□□□ -1.84
PCK1	YKR097W	FRS1	P15624	595 aa	Known RBP	3.55	□□□□□ -1.84
PCK1	YKR097W	EFT1	P32324	842 aa	Known RBP	3.55	□□□□□ -1.84
PCK1	YKR097W	MF(ALPHA)2	P32435	120 aa		3.55	□□□□□ -1.84
PCK1	YKR097W	LYS9	P38999	446 aa		3.55	□□□□□ -1.84
PCK1	YKR097W	GET2	P40056	285 aa		3.55	□□□□□ -1.84
PCK1	YKR097W	EMP65	P40085	556 aa		3.55	□□□□□ -1.84
PCK1	YKR097W	YNL195C	P40168	261 aa		3.55	□□□□□ -1.84
PCK1	YKR097W	ELO3	P40319	345 aa		3.55	□□□□□ -1.84
PCK1	YKR097W	VID28	P40547	921 aa		3.55	□□□□□ -1.84
PCK1	YKR097W	NOP2	P40991	618 aa	Known RBP	3.55	□□□□□ -1.84
PCK1	YKR097W	MTL1	P53214	551 aa		3.55	□□□□□ -1.84
PCK1	YKR097W	CTK1	Q03957	528 aa	Known RBP	3.55	□□□□□ -1.84
PCK1	YKR097W	VPS36	Q06696	566 aa		3.55	□□□□□ -1.84
PCK1	YKR097W	MET3	P08536	511 aa		3.54	□□□□□ -1.84
PCK1	YKR097W	ERG4	P25340	473 aa		3.54	□□□□□ -1.84
PCK1	YKR097W	PEA2	P40091	420 aa		3.54	□□□□□ -1.84
PCK1	YKR097W	RSC8	P43609	557 aa	Known RBP	3.54	□□□□□ -1.84
PCK1	YKR097W	RNR4	P49723	345 aa	Known RBP	3.54	□□□□□ -1.84
PCK1	YKR097W	ECM38	Q05902	660 aa	Predicted RBP	3.54	□□□□□ -1.84
PCK1	YKR097W	AIM39	Q08223	395 aa		3.54	□□□□□ -1.84
PCK1	YKR097W	MPD2	Q99316	277 aa		3.54	□□□□□ -1.84
PCK1	YKR097W	KAR1	P11927	433 aa		3.53	□□□□□ -1.84
PCK1	YKR097W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.53	□□□□□ -1.84	not detected
PCK1	YKR097W	PEX1	P24004	1043 aa		3.53	□□□□□ -1.84
PCK1	YKR097W	KTR4	P38131	464 aa		3.53	□□□□□ -1.84
PCK1	YKR097W	BUD8	P41698	603 aa		3.53	□□□□□ -1.84
PCK1	YKR097W	BIT61	P47041	543 aa		3.53	□□□□□ -1.84
PCK1	YKR097W	PHM6	Q05637	104 aa		3.53	□□□□□ -1.84
PCK1	YKR097W	RGC1	Q06108	1083 aa	Known RBP	3.53	□□□□□ -1.84
PCK1	YKR097W	PEX15	Q08215	383 aa		3.53	□□□□□ -1.84
PCK1	YKR097W	YOR378W	Q08902	515 aa		3.53	□□□□□ -1.84
PCK1	YKR097W	ATP4	P05626	244 aa		3.52	□□□□□ -1.85
PCK1	YKR097W	HRR25	P29295	494 aa	Known RBP	3.52	□□□□□ -1.85
PCK1	YKR097W	SEC6	P32844	805 aa		3.52	□□□□□ -1.85
PCK1	YKR097W	SRP68	P38687	599 aa	Known RBP	3.52	□□□□□ -1.85
PCK1	YKR097W	NUP60	P39705	539 aa		3.52	□□□□□ -1.85
PCK1	YKR097W	IRC5	P43610	853 aa		3.52	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 47.5 ms