RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W CWC15Q03772 175 aaKnown RBP3.84□□□□□ -1.8
SPT6YGR116W FMN1Q03778 218 aa3.84□□□□□ -1.8
SPT6YGR116W FUS2Q05670 677 aa3.84□□□□□ -1.8
SPT6YGR116W GGA1Q06336 557 aa3.84□□□□□ -1.8
SPT6YGR116W DSE3Q08729 430 aa3.84□□□□□ -1.8
SPT6YGR116W YLR125WQ12138 136 aa3.84□□□□□ -1.8
SPT6YGR116W DPH6Q12429 685 aa3.84□□□□□ -1.8
SPT6YGR116W FAS2P19097 1887 aaKnown RBP3.83□□□□□ -1.8
SPT6YGR116W PDC5P16467 563 aaKnown RBP3.83□□□□□ -1.8
SPT6YGR116W PWP2P25635 923 aaKnown RBP3.83□□□□□ -1.8
SPT6YGR116W OXP1P28273 1286 aa3.83□□□□□ -1.8
SPT6YGR116W YJU2P28320 278 aaPredicted RBP3.83□□□□□ -1.8
SPT6YGR116W ZIP1P31111 875 aa3.83□□□□□ -1.8
SPT6YGR116W GIP1P38229 639 aa3.83□□□□□ -1.8
SPT6YGR116W TRM5P38793 499 aa3.83□□□□□ -1.8
SPT6YGR116W SHC1P39000 512 aa3.83□□□□□ -1.8
SPT6YGR116W TEL2P53038 688 aa3.83□□□□□ -1.8
SPT6YGR116W ADI1Q03677 179 aa3.83□□□□□ -1.8
SPT6YGR116W BUL2Q03758 920 aaKnown RBP3.83□□□□□ -1.8
SPT6YGR116W YLR053CQ12026 108 aa3.83□□□□□ -1.8
SPT6YGR116W CMD1P06787 147 aaKnown RBP3.83□□□□□ -1.8
SPT6YGR116W MPH2P0CD99 609 aa3.83□□□□□ -1.8
SPT6YGR116W ISY1P21374 235 aaPredicted RBP3.83□□□□□ -1.8
SPT6YGR116W SNT1P25357 1226 aa3.83□□□□□ -1.8
SPT6YGR116W ITR2P30606 609 aa3.83□□□□□ -1.8
SPT6YGR116W FRD1P32614 470 aaKnown RBP3.83□□□□□ -1.8
SPT6YGR116W TGL4P36165 910 aa3.83□□□□□ -1.8
SPT6YGR116W NUP82P40368 713 aa3.83□□□□□ -1.8
SPT6YGR116W THI12P42883 340 aa3.83□□□□□ -1.8
SPT6YGR116W THI5P43534 340 aa3.83□□□□□ -1.8
SPT6YGR116W THI11P47183 340 aa3.83□□□□□ -1.8
SPT6YGR116W NMA2P53204 395 aa3.83□□□□□ -1.8
SPT6YGR116W TDA5Q06417 326 aaKnown RBP3.83□□□□□ -1.8
SPT6YGR116W THI13Q07748 340 aa3.83□□□□□ -1.8
SPT6YGR116W TUM1Q08686 304 aaKnown RBP3.83□□□□□ -1.8
SPT6YGR116W SPE4Q12455 300 aa3.83□□□□□ -1.8
SPT6YGR116W RPL6BP05739 176 aaKnown RBP3.83□□□□□ -1.8
SPT6YGR116W SUP45P12385 437 aaKnown RBP3.83□□□□□ -1.8
SPT6YGR116W DGR2P32330 852 aa3.83□□□□□ -1.8
SPT6YGR116W BUD2P33314 1104 aa3.83□□□□□ -1.8
SPT6YGR116W PTK1P36002 662 aaPredicted RBP3.83□□□□□ -1.8
SPT6YGR116W PRK1P40494 810 aa3.83□□□□□ -1.8
SPT6YGR116W AAD16Q02895 342 aa3.83□□□□□ -1.8
SPT6YGR116W DIB1Q06819 143 aaPredicted RBP3.83□□□□□ -1.8
SPT6YGR116W CIR2Q08822 631 aa3.83□□□□□ -1.8
SPT6YGR116W REP1P03871 373 aa3.82□□□□□ -1.8
SPT6YGR116W MGM1P32266 881 aa3.82□□□□□ -1.8
SPT6YGR116W SSE2P32590 693 aaKnown RBP3.82□□□□□ -1.8
SPT6YGR116W TPO5P36029 618 aa3.82□□□□□ -1.8
SPT6YGR116W YHL050CP38721 697 aa3.82□□□□□ -1.8
SPT6YGR116W GUP1P53154 560 aa3.82□□□□□ -1.8
SPT6YGR116W UTP22P53254 1237 aaPredicted RBP3.82□□□□□ -1.8
SPT6YGR116W DCP2P53550 970 aaKnown RBP3.82□□□□□ -1.8
SPT6YGR116W RSM24Q03976 319 aa3.82□□□□□ -1.8
SPT6YGR116W SEC10Q06245 871 aa3.82□□□□□ -1.8
SPT6YGR116W VAM6Q07468 1049 aa3.82□□□□□ -1.8
SPT6YGR116W YPL277CQ08989 487 aa3.82□□□□□ -1.8
SPT6YGR116W HRT3Q12347 344 aa3.82□□□□□ -1.8
SPT6YGR116W GPR1Q12361 961 aa3.82□□□□□ -1.8
SPT6YGR116W NPP1P25353 742 aa3.82□□□□□ -1.8
SPT6YGR116W YCR016WP25617 290 aaKnown RBP3.82□□□□□ -1.8
SPT6YGR116W DOM34P33309 386 aa3.82□□□□□ -1.8
SPT6YGR116W YEL1P34225 687 aa3.82□□□□□ -1.8
SPT6YGR116W BRL1P38770 471 aa3.82□□□□□ -1.8
SPT6YGR116W STL1P39932 569 aa3.82□□□□□ -1.8
SPT6YGR116W YTA12P40341 825 aa3.82□□□□□ -1.8
SPT6YGR116W CIT3P43635 486 aa3.82□□□□□ -1.8
SPT6YGR116W NUP84P52891 726 aa3.82□□□□□ -1.8
SPT6YGR116W YGR111WP53265 400 aa3.82□□□□□ -1.8
SPT6YGR116W BUD7Q08754 746 aa3.82□□□□□ -1.8
SPT6YGR116W SLX4Q12098 748 aa3.82□□□□□ -1.8
SPT6YGR116W CDC33P07260 213 aaKnown RBP3.82□□□□□ -1.8
SPT6YGR116W HEM15P16622 393 aa3.82□□□□□ -1.8
SPT6YGR116W PFK1P16861 987 aaKnown RBP3.82□□□□□ -1.8
SPT6YGR116W TFC1P32367 649 aa3.82□□□□□ -1.8
SPT6YGR116W YKL023WP36103 277 aaKnown RBP3.82□□□□□ -1.8
SPT6YGR116W FIG4P42837 879 aa3.82□□□□□ -1.8
SPT6YGR116W GLG2P47011 380 aa3.82□□□□□ -1.8
SPT6YGR116W YML6P51998 286 aa3.82□□□□□ -1.8
SPT6YGR116W MRM2P53123 320 aa3.82□□□□□ -1.8
SPT6YGR116W LSC1P53598 329 aaKnown RBP3.82□□□□□ -1.8
SPT6YGR116W OSH6Q02201 448 aa3.82□□□□□ -1.8
SPT6YGR116W MUB1Q03162 620 aa3.82□□□□□ -1.8
SPT6YGR116W MMT1Q03218 510 aa3.82□□□□□ -1.8
SPT6YGR116W SPO71Q03868 1245 aa3.82□□□□□ -1.8
SPT6YGR116W YDR179W-AQ03983 463 aa3.82□□□□□ -1.8
SPT6YGR116W PEX15Q08215 383 aa3.82□□□□□ -1.8
SPT6YGR116W EMP46Q12396 444 aa3.82□□□□□ -1.8
SPT6YGR116W PCK1P10963 549 aa3.81□□□□□ -1.8
SPT6YGR116W HSC82P15108 705 aaKnown RBP3.81□□□□□ -1.8
SPT6YGR116W RGR1P19263 1082 aa3.81□□□□□ -1.8
SPT6YGR116W VPS3P23643 1011 aa3.81□□□□□ -1.8
SPT6YGR116W EXO5P38289 585 aa3.81□□□□□ -1.8
SPT6YGR116W PMC1P38929 1173 aaPredicted RBP3.81□□□□□ -1.8
SPT6YGR116W IRR1P40541 1150 aa3.81□□□□□ -1.8
SPT6YGR116W CCT7P42943 550 aaKnown RBP3.81□□□□□ -1.8
SPT6YGR116W YJL055WP47044 245 aa3.81□□□□□ -1.8
SPT6YGR116W IMD4P50094 524 aaKnown RBP3.81□□□□□ -1.8
SPT6YGR116W NBP1P52919 319 aaPredicted RBP3.81□□□□□ -1.8
SPT6YGR116W YDL114WQ07530 308 aa3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 182.9 ms