RNA–Protein interactions for RNA: YGL088W

YGL088W, Transcript of Dubious open reading frame, yeast

Gene YGL088W, Length 366 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YGL088W	YGL088W	TRX2	P22803	104 aa	Known RBP	4.64	□□□□□ -1.67
YGL088W	YGL088W	DPB3	P27344	201 aa		4.64	□□□□□ -1.67
YGL088W	YGL088W	STE5	P32917	917 aa		4.64	□□□□□ -1.67
YGL088W	YGL088W	MIA40	P36046	403 aa		4.64	□□□□□ -1.67
YGL088W	YGL088W	SRX1	P36077	127 aa		4.64	□□□□□ -1.67
YGL088W	YGL088W	OSH3	P38713	996 aa	Known RBP	4.64	□□□□□ -1.67
YGL088W	YGL088W	NPR3	P38742	1146 aa		4.64	□□□□□ -1.67
YGL088W	YGL088W	GPI8	P49018	411 aa		4.64	□□□□□ -1.67
YGL088W	YGL088W	CNM67	P53865	581 aa	Known RBP	4.64	□□□□□ -1.67
YGL088W	YGL088W	YNL058C	P53947	316 aa		4.64	□□□□□ -1.67
YGL088W	YGL088W	SLG1	P54867	378 aa		4.64	□□□□□ -1.67
YGL088W	YGL088W	ADA2	Q02336	434 aa		4.64	□□□□□ -1.67
YGL088W	YGL088W	SRP1	Q02821	542 aa	Known RBP	4.64	□□□□□ -1.67
YGL088W	YGL088W	SGT2	Q12118	346 aa	Known RBP	4.64	□□□□□ -1.67
YGL088W	YGL088W	PGK1	P00560	416 aa	Known RBP	4.63	□□□□□ -1.67
YGL088W	YGL088W	ADE4	P04046	510 aa	Known RBP	4.63	□□□□□ -1.67
YGL088W	YGL088W	PIK1	P39104	1066 aa		4.63	□□□□□ -1.67
YGL088W	YGL088W	ROM1	P53046	1155 aa		4.63	□□□□□ -1.67
YGL088W	YGL088W	MLC1	P53141	149 aa		4.63	□□□□□ -1.67
YGL088W	YGL088W	BNI5	P53890	448 aa	Known RBP	4.63	□□□□□ -1.67
YGL088W	YGL088W	SMA1	Q02651	245 aa		4.63	□□□□□ -1.67
YGL088W	YGL088W	PHM6	Q05637	104 aa		4.63	□□□□□ -1.67
YGL088W	YGL088W	YPR172W	Q06608	200 aa		4.63	□□□□□ -1.67
YGL088W	YGL088W	ARP6	Q12509	438 aa		4.63	□□□□□ -1.67
YGL088W	YGL088W	IPP1	P00817	287 aa	Known RBP	4.62	□□□□□ -1.67
YGL088W	YGL088W	HXK1	P04806	485 aa	Known RBP	4.62	□□□□□ -1.67
YGL088W	YGL088W	ANP1	P32629	500 aa		4.62	□□□□□ -1.67
YGL088W	YGL088W	SAP190	P36123	1033 aa		4.62	□□□□□ -1.67
YGL088W	YGL088W	PIM1	P36775	1133 aa		4.62	□□□□□ -1.67
YGL088W	YGL088W	BAT1	P38891	393 aa	Known RBP	4.62	□□□□□ -1.67
YGL088W	YGL088W	BIM1	P40013	344 aa		4.62	□□□□□ -1.67
YGL088W	YGL088W	BTT1	P40314	149 aa	Predicted RBP	4.62	□□□□□ -1.67
YGL088W	YGL088W	YJR061W	P40355	935 aa		4.62	□□□□□ -1.67
YGL088W	YGL088W	ALG2	P43636	503 aa		4.62	□□□□□ -1.67
YGL088W	YGL088W	VTC4	P47075	721 aa		4.62	□□□□□ -1.67
YGL088W	YGL088W	VPS25	P47142	202 aa		4.62	□□□□□ -1.67
YGL088W	YGL088W	CLU1	Q03690	1277 aa	Known RBP	4.62	□□□□□ -1.67
YGL088W	YGL088W	ISR1	Q06098	443 aa	Known RBP	4.62	□□□□□ -1.67
YGL088W	YGL088W	YCG1	Q06680	1035 aa		4.62	□□□□□ -1.67
YGL088W	YGL088W	OXR1	Q08952	273 aa		4.62	□□□□□ -1.67
YGL088W	YGL088W	MTF1	P14908	341 aa	Known RBP	4.61	□□□□□ -1.67
YGL088W	YGL088W	SNF5	P18480	905 aa		4.61	□□□□□ -1.67
YGL088W	YGL088W	SPT5	P27692	1063 aa	Known RBP	4.61	□□□□□ -1.67
YGL088W	YGL088W	SKG6	P32900	734 aa	Predicted RBP	4.61	□□□□□ -1.67
YGL088W	YGL088W	MYO3	P36006	1272 aa		4.61	□□□□□ -1.67
YGL088W	YGL088W	PAN5	P38787	379 aa		4.61	□□□□□ -1.67
YGL088W	YGL088W	DOT6	P40059	670 aa	Known RBP	4.61	□□□□□ -1.67
YGL088W	YGL088W	SIP5	P40210	489 aa	Known RBP	4.61	□□□□□ -1.67
YGL088W	YGL088W	OSW5	P40219	148 aa		4.61	□□□□□ -1.67
YGL088W	YGL088W	ASG1	P40467	964 aa		4.61	□□□□□ -1.67
YGL088W	YGL088W	LEM3	P42838	414 aa		4.61	□□□□□ -1.67
YGL088W	YGL088W	VMS1	Q04311	632 aa	Known RBP	4.61	□□□□□ -1.67
YGL088W	YGL088W	EST2	Q06163	884 aa		4.61	□□□□□ -1.67
YGL088W	YGL088W	RSC2	Q06488	889 aa		4.61	□□□□□ -1.67
YGL088W	YGL088W	RPN8	Q08723	338 aa	Known RBP	4.61	□□□□□ -1.67
YGL088W	YGL088W	WTM2	Q12206	467 aa		4.61	□□□□□ -1.67
YGL088W	YGL088W	GLN3	P18494	730 aa		4.6	□□□□□ -1.67
YGL088W	YGL088W	PMI40	P29952	429 aa	Known RBP	4.6	□□□□□ -1.67
YGL088W	YGL088W	CCR4	P31384	837 aa	Known RBP	4.6	□□□□□ -1.67
YGL088W	YGL088W	IMP2'	P32351	346 aa		4.6	□□□□□ -1.67
YGL088W	YGL088W	TMT1	P32643	299 aa		4.6	□□□□□ -1.67
YGL088W	YGL088W	YKL091C	P33324	310 aa	Known RBP	4.6	□□□□□ -1.67
YGL088W	YGL088W	SAS3	P34218	831 aa		4.6	□□□□□ -1.67
YGL088W	YGL088W	SUL1	P38359	859 aa		4.6	□□□□□ -1.67
YGL088W	YGL088W	YHR218W	P38899	603 aa		4.6	□□□□□ -1.67
YGL088W	YGL088W	ATG32	P40458	529 aa		4.6	□□□□□ -1.67
YGL088W	YGL088W	YPS6	P40583	537 aa		4.6	□□□□□ -1.67
YGL088W	YGL088W	VTC2	P43585	828 aa		4.6	□□□□□ -1.67
YGL088W	YGL088W	NUP84	P52891	726 aa		4.6	□□□□□ -1.67
YGL088W	YGL088W	UTP8	P53276	713 aa	Known RBP	4.6	□□□□□ -1.67
YGL088W	YGL088W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
YGL088W	YGL088W	SXM1	Q04175	944 aa	Known RBP	4.6	□□□□□ -1.67
YGL088W	YGL088W	YDL144C	Q07589	356 aa		4.6	□□□□□ -1.67
YGL088W	YGL088W	NOB1	Q08444	459 aa	Known RBP	4.6	□□□□□ -1.67
YGL088W	YGL088W	APC5	Q08683	685 aa		4.6	□□□□□ -1.67
YGL088W	YGL088W	LEA1	Q08963	238 aa	Predicted RBP	4.6	□□□□□ -1.67
YGL088W	YGL088W	TY1A-DR3	Q12441	440 aa		4.6	□□□□□ -1.67
YGL088W	YGL088W	RIP1	P08067	215 aa		4.59	□□□□□ -1.67
YGL088W	YGL088W	FPR1	P20081	114 aa	Known RBP	4.59	□□□□□ -1.67
YGL088W	YGL088W	YCL042W	P25572	119 aa		4.59	□□□□□ -1.67
YGL088W	YGL088W	DAL1	P32375	460 aa		4.59	□□□□□ -1.67
YGL088W	YGL088W	SPC110	P32380	944 aa		4.59	□□□□□ -1.67
YGL088W	YGL088W	ATG19	P35193	415 aa		4.59	□□□□□ -1.67
YGL088W	YGL088W	SAH1	P39954	449 aa	Known RBP	4.59	□□□□□ -1.67
YGL088W	YGL088W	TIM54	P47045	478 aa		4.59	□□□□□ -1.67
YGL088W	YGL088W	YNR065C	P53751	1116 aa		4.59	□□□□□ -1.67
YGL088W	YGL088W	PDR18	P53756	1333 aa		4.59	□□□□□ -1.67
YGL088W	YGL088W	VTC3	Q02725	835 aa		4.59	□□□□□ -1.67
YGL088W	YGL088W	HOS3	Q02959	697 aa	Known RBP	4.59	□□□□□ -1.67
YGL088W	YGL088W	VTI1	Q04338	217 aa		4.59	□□□□□ -1.67
YGL088W	YGL088W	PUF6	Q04373	656 aa	Known RBP	4.59	□□□□□ -1.67
YGL088W	YGL088W	RRP9	Q06506	573 aa	Known RBP	4.59	□□□□□ -1.67
YGL088W	YGL088W	RRP15	Q06511	250 aa	Predicted RBP	4.59	□□□□□ -1.67
YGL088W	YGL088W	CDC45	Q08032	650 aa		4.59	□□□□□ -1.67
YGL088W	YGL088W	YGR161W-C	Q3E744	92 aa		4.59	□□□□□ -1.67
YGL088W	YGL088W	YIL046W-A	Q3E7Z4	54 aa		4.59	□□□□□ -1.67
YGL088W	YGL088W	FOB1	O13329	566 aa		4.58	□□□□□ -1.68
YGL088W	YGL088W	DED1	P06634	604 aa	Known RBP	4.58	□□□□□ -1.68
YGL088W	YGL088W	ERG6	P25087	383 aa	Known RBP	4.58	□□□□□ -1.68
YGL088W	YGL088W	UTR2	P32623	467 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 77.7 ms