RNA–Protein interactions for RNA: YDR432W

NPL3, Transcript of RNA-binding protein, yeast

Gene NPL3, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NPL3	YDR432W	HOM2	P13663	365 aa	Known RBP	13.59	□□□□□ -0.23
NPL3	YDR432W	RNR1	P21524	888 aa	Known RBP	13.59	□□□□□ -0.23
NPL3	YDR432W	SIR1	P21691	654 aa		13.59	□□□□□ -0.23
NPL3	YDR432W	RRT12	P25381	491 aa		13.59	□□□□□ -0.23
NPL3	YDR432W	EFB1	P32471	206 aa	Known RBP	13.59	□□□□□ -0.23
NPL3	YDR432W	MAP2	P38174	421 aa	Known RBP	13.59	□□□□□ -0.23
NPL3	YDR432W	NPR3	P38742	1146 aa		13.59	□□□□□ -0.23
NPL3	YDR432W	CTM1	P38818	585 aa		13.59	□□□□□ -0.23
NPL3	YDR432W	DSE1	P40077	573 aa		13.59	□□□□□ -0.23
NPL3	YDR432W	LSB3	P43603	459 aa	Known RBP	13.59	□□□□□ -0.23
NPL3	YDR432W	CEF1	Q03654	590 aa	Predicted RBP	13.59	□□□□□ -0.23
NPL3	YDR432W	COG4	Q06096	861 aa		13.59	□□□□□ -0.23
NPL3	YDR432W	ETT1	Q08421	412 aa	Known RBP	13.59	□□□□□ -0.23
NPL3	YDR432W	NDJ1	Q12366	352 aa		13.59	□□□□□ -0.23
NPL3	YDR432W	CDC42	P19073	191 aa		13.58	□□□□□ -0.24
NPL3	YDR432W	PPH22	P23595	377 aa		13.58	□□□□□ -0.24
NPL3	YDR432W	MRM1	P25270	412 aa		13.58	□□□□□ -0.24
NPL3	YDR432W	ECM32	P32644	1121 aa	Known RBP	13.58	□□□□□ -0.24
NPL3	YDR432W	BCD1	P38772	366 aa		13.58	□□□□□ -0.24
NPL3	YDR432W	MED6	P38782	295 aa		13.58	□□□□□ -0.24
NPL3	YDR432W	IMP4	P53941	290 aa	Known RBP	13.58	□□□□□ -0.24
NPL3	YDR432W	MZM1	Q03429	123 aa	Predicted RBP	13.58	□□□□□ -0.24
NPL3	YDR432W	STE20	Q03497	939 aa	Known RBP	13.58	□□□□□ -0.24
NPL3	YDR432W	TSR1	Q07381	788 aa	Known RBP	13.58	□□□□□ -0.24
NPL3	YDR432W	FAL1	Q12099	399 aa	Known RBP	13.58	□□□□□ -0.24
NPL3	YDR432W	KIP1	P28742	1111 aa		13.57	□□□□□ -0.24
NPL3	YDR432W	NUP60	P39705	539 aa		13.57	□□□□□ -0.24
NPL3	YDR432W	YPR084W	Q06821	456 aa		13.57	□□□□□ -0.24
NPL3	YDR432W	SCJ1	P25303	377 aa		13.56	□□□□□ -0.24
NPL3	YDR432W	CPR7	P47103	393 aa		13.56	□□□□□ -0.24
NPL3	YDR432W	FAA4	P47912	694 aa	Known RBP	13.56	□□□□□ -0.24
NPL3	YDR432W	YNR061C	P53747	219 aa		13.56	□□□□□ -0.24
NPL3	YDR432W	CET1	O13297	549 aa	Predicted RBP	13.55	□□□□□ -0.24
NPL3	YDR432W	CBF2	P32504	956 aa		13.55	□□□□□ -0.24
NPL3	YDR432W	LSC2	P53312	427 aa		13.55	□□□□□ -0.24
NPL3	YDR432W	CAF120	P53836	1060 aa		13.55	□□□□□ -0.24
NPL3	YDR432W	YOL075C	Q08234	1294 aa		13.55	□□□□□ -0.24
NPL3	YDR432W	GGA2	P38817	585 aa	Known RBP	13.54	□□□□□ -0.24
NPL3	YDR432W	CHS6	P40955	746 aa		13.54	□□□□□ -0.24
NPL3	YDR432W	GCN5	Q03330	439 aa		13.54	□□□□□ -0.24
NPL3	YDR432W	YML053C	Q04978	212 aa		13.54	□□□□□ -0.24
NPL3	YDR432W	YDL206W	Q12424	762 aa		13.54	□□□□□ -0.24
NPL3	YDR432W	VBA3	P25594	458 aa		13.53	□□□□□ -0.24
NPL3	YDR432W	PSO2	P30620	661 aa		13.53	□□□□□ -0.24
NPL3	YDR432W	GPI10	P30777	616 aa		13.53	□□□□□ -0.24
NPL3	YDR432W	VBA5	P36172	582 aa		13.53	□□□□□ -0.24
NPL3	YDR432W	NOP4	P37838	685 aa	Known RBP	13.53	□□□□□ -0.24
NPL3	YDR432W	AVT2	P39981	480 aa		13.53	□□□□□ -0.24
NPL3	YDR432W	SBE2	P42223	864 aa	Known RBP	13.53	□□□□□ -0.24
NPL3	YDR432W	GUF1	P46943	645 aa		13.53	□□□□□ -0.24
NPL3	YDR432W	PPM1	Q04081	328 aa		13.53	□□□□□ -0.24
NPL3	YDR432W	AFT2	Q08957	416 aa		13.53	□□□□□ -0.24
NPL3	YDR432W	FLC1	Q08967	793 aa		13.53	□□□□□ -0.24
NPL3	YDR432W	NBP2	Q12163	236 aa		13.53	□□□□□ -0.24
NPL3	YDR432W	IRA2	P19158	3079 aa		13.52	□□□□□ -0.24
NPL3	YDR432W	SAT4	P25333	603 aa	Known RBP	13.52	□□□□□ -0.25
NPL3	YDR432W	GSY2	P27472	705 aa		13.52	□□□□□ -0.25
NPL3	YDR432W	DSS4	P32601	143 aa		13.52	□□□□□ -0.25
NPL3	YDR432W	PTC3	P34221	468 aa	Known RBP	13.52	□□□□□ -0.25
NPL3	YDR432W	YBR225W	P38321	900 aa		13.52	□□□□□ -0.25
NPL3	YDR432W	KIC1	P38692	1080 aa		13.52	□□□□□ -0.25
NPL3	YDR432W	FHL1	P39521	936 aa		13.52	□□□□□ -0.25
NPL3	YDR432W	YGR237C	P50089	785 aa		13.52	□□□□□ -0.25
NPL3	YDR432W	MTD1	Q02046	320 aa	Known RBP	13.52	□□□□□ -0.25
NPL3	YDR432W	ECM22	Q05958	814 aa	Predicted RBP	13.52	□□□□□ -0.25
NPL3	YDR432W	MSB2	P32334	1306 aa		13.51	□□□□□ -0.25
NPL3	YDR432W	PDC6	P26263	563 aa	Known RBP	13.51	□□□□□ -0.25
NPL3	YDR432W	KNS1	P32350	737 aa	Predicted RBP	13.51	□□□□□ -0.25
NPL3	YDR432W	RRM3	P38766	723 aa		13.51	□□□□□ -0.25
NPL3	YDR432W	YIL161W	P40449	235 aa	Known RBP	13.51	□□□□□ -0.25
NPL3	YDR432W	SSL2	Q00578	843 aa		13.51	□□□□□ -0.25
NPL3	YDR432W	ECM3	Q99252	613 aa		13.51	□□□□□ -0.25
NPL3	YDR432W	LRE1	P25579	583 aa	Known RBP	13.5	□□□□□ -0.25
NPL3	YDR432W	DAL1	P32375	460 aa		13.5	□□□□□ -0.25
NPL3	YDR432W	ATG12	P38316	186 aa		13.5	□□□□□ -0.25
NPL3	YDR432W	NMD3	P38861	518 aa	Known RBP	13.5	□□□□□ -0.25
NPL3	YDR432W	DOT6	P40059	670 aa	Known RBP	13.5	□□□□□ -0.25
NPL3	YDR432W	AIP1	P46680	615 aa	Known RBP	13.5	□□□□□ -0.25
NPL3	YDR432W	APL1	P27351	700 aa		13.49	□□□□□ -0.25
NPL3	YDR432W	SPT23	P35210	1082 aa		13.49	□□□□□ -0.25
NPL3	YDR432W	YMC2	P38087	329 aa		13.49	□□□□□ -0.25
NPL3	YDR432W	RSC1	P53236	928 aa		13.49	□□□□□ -0.25
NPL3	YDR432W	NIS1	P53939	407 aa		13.49	□□□□□ -0.25
NPL3	YDR432W	TOF2	Q02208	771 aa		13.49	□□□□□ -0.25
NPL3	YDR432W	APC5	Q08683	685 aa		13.49	□□□□□ -0.25
NPL3	YDR432W	AI5_BETA	Q9ZZX0	354 aa		13.49	□□□□□ -0.25
NPL3	YDR432W	ATE1	P16639	503 aa		13.48	□□□□□ -0.25
NPL3	YDR432W	RKM3	P38222	552 aa		13.48	□□□□□ -0.25
NPL3	YDR432W	VPS70	P47161	811 aa		13.48	□□□□□ -0.25
NPL3	YDR432W	YLR297W	Q05899	129 aa		13.48	□□□□□ -0.25
NPL3	YDR432W	YAP7	Q08182	245 aa		13.48	□□□□□ -0.25
NPL3	YDR432W	SAM3	Q08986	587 aa		13.48	□□□□□ -0.25
NPL3	YDR432W	RGR1	P19263	1082 aa		13.47	□□□□□ -0.25
NPL3	YDR432W	MSH2	P25847	964 aa		13.47	□□□□□ -0.25
NPL3	YDR432W	EFM2	P38347	419 aa		13.47	□□□□□ -0.25
NPL3	YDR432W	TIF5	P38431	405 aa	Known RBP	13.47	□□□□□ -0.25
NPL3	YDR432W	SEG1	Q04279	960 aa		13.47	□□□□□ -0.25
NPL3	YDR432W	CSR1	Q06705	408 aa	Known RBP	13.47	□□□□□ -0.25
NPL3	YDR432W	DDC1	Q08949	612 aa		13.47	□□□□□ -0.25
NPL3	YDR432W	SWE1	P32944	819 aa		13.46	□□□□□ -0.25

Retrieved 100 of 5,963 RNA–protein pairs in 163.5 ms