RNA–Protein interactions for RNA: YDR247W

VHS1, Transcript of Cytoplasmic serine/threonine protein kinase, yeastyeast

Gene VHS1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS1YDR247W PIL1P53252 339 aaKnown RBP6.24□□□□□ -1.41
VHS1YDR247W MSC2Q03455 724 aa6.24□□□□□ -1.41
VHS1YDR247W SIZ1Q04195 904 aa6.24□□□□□ -1.41
VHS1YDR247W CRR1Q05790 422 aa6.24□□□□□ -1.41
VHS1YDR247W NYV1Q12255 253 aa6.24□□□□□ -1.41
VHS1YDR247W YLR122CQ12312 125 aa6.24□□□□□ -1.41
VHS1YDR247W ROM2P51862 1356 aaKnown RBP6.23□□□□□ -1.41
VHS1YDR247W DID4P36108 232 aa6.23□□□□□ -1.41
VHS1YDR247W RKM3P38222 552 aa6.23□□□□□ -1.41
VHS1YDR247W PMC1P38929 1173 aaPredicted RBP6.23□□□□□ -1.41
VHS1YDR247W MAM1P40065 302 aa6.23□□□□□ -1.41
VHS1YDR247W PEA2P40091 420 aa6.23□□□□□ -1.41
VHS1YDR247W CIR1P42940 261 aa6.23□□□□□ -1.41
VHS1YDR247W ENV11P53246 860 aa6.23□□□□□ -1.41
VHS1YDR247W SUB1P54000 292 aaKnown RBP6.23□□□□□ -1.41
VHS1YDR247W YPL034WQ03083 165 aa6.23□□□□□ -1.41
VHS1YDR247W YOR022CQ12204 715 aa6.23□□□□□ -1.41
VHS1YDR247W PHM7Q12252 991 aa6.23□□□□□ -1.41
VHS1YDR247W RIB2Q12362 591 aaKnown RBP6.23□□□□□ -1.41
VHS1YDR247W ENA1P13587 1091 aa6.22□□□□□ -1.41
VHS1YDR247W KAE1P36132 386 aa6.22□□□□□ -1.41
VHS1YDR247W CCT5P40413 562 aaKnown RBP6.22□□□□□ -1.41
VHS1YDR247W YFL052WP43551 465 aa6.22□□□□□ -1.41
VHS1YDR247W NIT2P47016 307 aa6.22□□□□□ -1.41
VHS1YDR247W YGR012WP53206 393 aa6.22□□□□□ -1.41
VHS1YDR247W MDG1P53885 366 aa6.22□□□□□ -1.41
VHS1YDR247W ENA2Q01896 1091 aa6.22□□□□□ -1.41
VHS1YDR247W VPS20Q04272 221 aa6.22□□□□□ -1.41
VHS1YDR247W CDA1Q06702 301 aa6.22□□□□□ -1.41
VHS1YDR247W RMP1Q12530 201 aa6.22□□□□□ -1.41
VHS1YDR247W ENA5Q12691 1091 aa6.22□□□□□ -1.41
VHS1YDR247W QCR6P00127 147 aa6.21□□□□□ -1.41
VHS1YDR247W RPS19AP07280 144 aaKnown RBP6.21□□□□□ -1.41
VHS1YDR247W RPS19BP07281 144 aaPredicted RBP6.21□□□□□ -1.41
VHS1YDR247W HIR1P32479 840 aa6.21□□□□□ -1.41
VHS1YDR247W RPN12P32496 274 aa6.21□□□□□ -1.41
VHS1YDR247W RPD3P32561 433 aa6.21□□□□□ -1.41
VHS1YDR247W ZRG8P40021 1076 aa6.21□□□□□ -1.41
VHS1YDR247W ICP55P40051 511 aa6.21□□□□□ -1.41
VHS1YDR247W PRP43P53131 767 aaKnown RBP6.21□□□□□ -1.41
VHS1YDR247W HST1P53685 503 aa6.21□□□□□ -1.41
VHS1YDR247W YNL034WP53963 612 aa6.21□□□□□ -1.41
VHS1YDR247W YNL018CP53976 612 aa6.21□□□□□ -1.41
VHS1YDR247W TGL2P54857 326 aa6.21□□□□□ -1.41
VHS1YDR247W RPN7Q06103 429 aaKnown RBP6.21□□□□□ -1.41
VHS1YDR247W MCA1Q08601 432 aa6.21□□□□□ -1.41
VHS1YDR247W THI21Q08975 551 aa6.21□□□□□ -1.41
VHS1YDR247W MPD2Q99316 277 aa6.21□□□□□ -1.41
VHS1YDR247W DUR1,2P32528 1835 aaKnown RBP6.21□□□□□ -1.41
VHS1YDR247W GCD1P09032 578 aaPredicted RBP6.2□□□□□ -1.42
VHS1YDR247W RNR2P09938 399 aaKnown RBP6.2□□□□□ -1.42
VHS1YDR247W YKR051WP36142 418 aa6.2□□□□□ -1.42
VHS1YDR247W SKN7P38889 622 aa6.2□□□□□ -1.42
VHS1YDR247W GPP2P40106 250 aaKnown RBP6.2□□□□□ -1.42
VHS1YDR247W YIL108WP40483 696 aaKnown RBP6.2□□□□□ -1.42
VHS1YDR247W PSP2P50109 593 aaKnown RBP6.2□□□□□ -1.42
VHS1YDR247W ECM9Q02202 377 aa6.2□□□□□ -1.42
VHS1YDR247W YPL277CQ08989 487 aa6.2□□□□□ -1.42
VHS1YDR247W HAL9Q12180 1030 aa6.2□□□□□ -1.42
VHS1YDR247W RRP5Q05022 1729 aaKnown RBP6.2□□□□□ -1.42
VHS1YDR247W BIK1P11709 440 aa6.19□□□□□ -1.42
VHS1YDR247W SST2P11972 698 aaKnown RBP6.19□□□□□ -1.42
VHS1YDR247W BNA2P47125 453 aa6.19□□□□□ -1.42
VHS1YDR247W ZIP2P53061 704 aa6.19□□□□□ -1.42
VHS1YDR247W YGR130CP53278 816 aa6.19□□□□□ -1.42
VHS1YDR247W VMS1Q04311 632 aaKnown RBP6.19□□□□□ -1.42
VHS1YDR247W BMS1Q08965 1183 aaKnown RBP6.19□□□□□ -1.42
VHS1YDR247W CDC16P09798 840 aa6.18□□□□□ -1.42
VHS1YDR247W KAR1P11927 433 aa6.18□□□□□ -1.42
VHS1YDR247W CMP2P14747 604 aa6.18□□□□□ -1.42
VHS1YDR247W PWP2P25635 923 aaKnown RBP6.18□□□□□ -1.42
VHS1YDR247W DAL3P32459 195 aa6.18□□□□□ -1.42
VHS1YDR247W MIC60P36112 540 aa6.18□□□□□ -1.42
VHS1YDR247W RSM25P40496 264 aa6.18□□□□□ -1.42
VHS1YDR247W DUS1P53759 423 aaKnown RBP6.18□□□□□ -1.42
VHS1YDR247W SSL1Q04673 461 aaPredicted RBP6.18□□□□□ -1.42
VHS1YDR247W VTS1Q08831 523 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42not detected
VHS1YDR247W ADE6P38972 1358 aaKnown RBP6.18□□□□□ -1.42
VHS1YDR247W YRF1-2P40105 1681 aa6.18□□□□□ -1.42
VHS1YDR247W VAS1P07806 1104 aaKnown RBP6.18□□□□□ -1.42
VHS1YDR247W RAD24P32641 659 aa6.18□□□□□ -1.42
VHS1YDR247W YKR018CP36114 725 aa6.18□□□□□ -1.42
VHS1YDR247W POA1P38218 177 aa6.18□□□□□ -1.42
VHS1YDR247W YHM2Q04013 314 aa6.18□□□□□ -1.42
VHS1YDR247W LPX1Q12405 387 aaKnown RBP6.18□□□□□ -1.42
VHS1YDR247W YLR149CQ99296 730 aa6.18□□□□□ -1.42
VHS1YDR247W Q0142Q9ZZW4 58 aa6.18□□□□□ -1.42
VHS1YDR247W YIL177CP40434 1758 aa6.17□□□□□ -1.42
VHS1YDR247W YJL225CP40889 1758 aa6.17□□□□□ -1.42
VHS1YDR247W CYC7P00045 113 aa6.17□□□□□ -1.42
VHS1YDR247W TRZ1P36159 838 aaPredicted RBP6.17□□□□□ -1.42
VHS1YDR247W FLR1P38124 548 aa6.17□□□□□ -1.42
VHS1YDR247W BIT2P38346 545 aa6.17□□□□□ -1.42
VHS1YDR247W HYR1P40581 163 aaKnown RBP6.17□□□□□ -1.42
VHS1YDR247W BFA1P47113 574 aa6.17□□□□□ -1.42
VHS1YDR247W PBP1P53297 722 aaKnown RBP6.17□□□□□ -1.42
VHS1YDR247W PTA1Q01329 785 aaPredicted RBP6.17□□□□□ -1.42
VHS1YDR247W SKY1Q03656 742 aa6.17□□□□□ -1.42
VHS1YDR247W PHM6Q05637 104 aa6.17□□□□□ -1.42
VHS1YDR247W LYS2P07702 1392 aa6.17□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms