RNA–Protein interactions for RNA: YDL220C

CDC13, Transcript of Single stranded DNA-binding protein found at TG1-3 telomere G-tails, yeast

Gene CDC13, Length 2,775 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC13	YDL220C	HIM1	Q06674	414 aa		7.38	□□□□□ -1.23
CDC13	YDL220C	DCS2	Q12123	353 aa		7.38	□□□□□ -1.23
CDC13	YDL220C	RRP36	Q12481	300 aa	Predicted RBP	7.38	□□□□□ -1.23
CDC13	YDL220C	RPA190	P10964	1664 aa	Known RBP	7.38	□□□□□ -1.23
CDC13	YDL220C	RET1	P22276	1149 aa	Known RBP	7.38	□□□□□ -1.23
CDC13	YDL220C	YCR051W	P25631	222 aa		7.38	□□□□□ -1.23
CDC13	YDL220C	YKL050C	P35736	922 aa		7.38	□□□□□ -1.23
CDC13	YDL220C	MAK5	P38112	773 aa	Predicted RBP	7.38	□□□□□ -1.23
CDC13	YDL220C	SLX1	P38324	304 aa		7.38	□□□□□ -1.23
CDC13	YDL220C	UBP2	Q01476	1272 aa		7.38	□□□□□ -1.23
CDC13	YDL220C	DBP9	Q06218	594 aa	Known RBP	7.38	□□□□□ -1.23
CDC13	YDL220C	SAM3	Q08986	587 aa		7.38	□□□□□ -1.23
CDC13	YDL220C	GET4	Q12125	312 aa		7.38	□□□□□ -1.23
CDC13	YDL220C	RPS3	P05750	240 aa	Known RBP	7.37	□□□□□ -1.23
CDC13	YDL220C	MSD1	P15179	658 aa	Known RBP	7.37	□□□□□ -1.23
CDC13	YDL220C	CLN2	P20438	545 aa		7.37	□□□□□ -1.23
CDC13	YDL220C	MEI4	P29467	408 aa		7.37	□□□□□ -1.23
CDC13	YDL220C	CRM1	P30822	1084 aa	Known RBP	7.37	□□□□□ -1.23
CDC13	YDL220C	ERP5	P38819	212 aa		7.37	□□□□□ -1.23
CDC13	YDL220C	SHQ1	P40486	507 aa	Predicted RBP	7.37	□□□□□ -1.23
CDC13	YDL220C	CAB2	P40506	365 aa		7.37	□□□□□ -1.23
CDC13	YDL220C	YIL077C	P40508	320 aa		7.37	□□□□□ -1.23
CDC13	YDL220C	BRE2	P43132	505 aa		7.37	□□□□□ -1.23
CDC13	YDL220C	SWP82	P43554	623 aa		7.37	□□□□□ -1.23
CDC13	YDL220C	NUP84	P52891	726 aa		7.37	□□□□□ -1.23
CDC13	YDL220C	RBG2	P53295	368 aa	Known RBP	7.37	□□□□□ -1.23
CDC13	YDL220C	DMA2	P53924	522 aa		7.37	□□□□□ -1.23
CDC13	YDL220C	ABZ2	Q03266	374 aa		7.37	□□□□□ -1.23
CDC13	YDL220C	ARX1	Q03862	593 aa	Known RBP	7.37	□□□□□ -1.23
CDC13	YDL220C	URH1	Q04179	340 aa		7.37	□□□□□ -1.23
CDC13	YDL220C	SPO21	Q12411	609 aa		7.37	□□□□□ -1.23
CDC13	YDL220C	SPO12	P17123	173 aa		7.37	□□□□□ -1.23
CDC13	YDL220C	ITR1	P30605	584 aa		7.37	□□□□□ -1.23
CDC13	YDL220C	YKT6	P36015	200 aa	Known RBP	7.37	□□□□□ -1.23
CDC13	YDL220C	DAN4	P47179	1161 aa		7.37	□□□□□ -1.23
CDC13	YDL220C	SRP1	Q02821	542 aa	Known RBP	7.37	□□□□□ -1.23
CDC13	YDL220C	GPI17	Q04080	534 aa		7.37	□□□□□ -1.23
CDC13	YDL220C	TAF11	Q04226	346 aa		7.37	□□□□□ -1.23
CDC13	YDL220C	HCR1	Q05775	265 aa	Known RBP	7.37	□□□□□ -1.23
CDC13	YDL220C	KRE2	P27809	442 aa		7.37	□□□□□ -1.23
CDC13	YDL220C	RAM2	P29703	316 aa		7.37	□□□□□ -1.23
CDC13	YDL220C	XRS2	P33301	854 aa		7.37	□□□□□ -1.23
CDC13	YDL220C	SPC42	P36094	363 aa		7.37	□□□□□ -1.23
CDC13	YDL220C	OTU2	P38747	307 aa	Known RBP	7.37	□□□□□ -1.23
CDC13	YDL220C	YJR039W	P47107	1121 aa		7.37	□□□□□ -1.23
CDC13	YDL220C	YNL040W	P53960	456 aa	Predicted RBP	7.37	□□□□□ -1.23
CDC13	YDL220C	GIC2	Q06648	383 aa		7.37	□□□□□ -1.23
CDC13	YDL220C	RTC5	Q12108	567 aa	Known RBP	7.37	□□□□□ -1.23
CDC13	YDL220C	YPR022C	Q12139	1133 aa		7.37	□□□□□ -1.23
CDC13	YDL220C	HSP60	P19882	572 aa	Known RBP	7.36	□□□□□ -1.23
CDC13	YDL220C	REB1	P21538	810 aa		7.36	□□□□□ -1.23
CDC13	YDL220C	IRE1	P32361	1115 aa		7.36	□□□□□ -1.23
CDC13	YDL220C	SRB4	P32569	687 aa		7.36	□□□□□ -1.23
CDC13	YDL220C	KTR2	P33550	425 aa		7.36	□□□□□ -1.23
CDC13	YDL220C	DDI1	P40087	428 aa		7.36	□□□□□ -1.23
CDC13	YDL220C	PEF1	P53238	335 aa		7.36	□□□□□ -1.23
CDC13	YDL220C	SOV1	Q04748	898 aa		7.36	□□□□□ -1.23
CDC13	YDL220C	ADY3	Q07732	790 aa		7.36	□□□□□ -1.23
CDC13	YDL220C	USO1	P25386	1790 aa		7.36	□□□□□ -1.23
CDC13	YDL220C	PEP3	P27801	918 aa		7.36	□□□□□ -1.23
CDC13	YDL220C	PRP19	P32523	503 aa	Known RBP	7.36	□□□□□ -1.23
CDC13	YDL220C	BLI1	P35727	113 aa		7.36	□□□□□ -1.23
CDC13	YDL220C	APE4	P38821	490 aa		7.36	□□□□□ -1.23
CDC13	YDL220C	ALG5	P40350	334 aa		7.36	□□□□□ -1.23
CDC13	YDL220C	PCI8	P40512	444 aa		7.36	□□□□□ -1.23
CDC13	YDL220C	RMR1	P53060	241 aa		7.36	□□□□□ -1.23
CDC13	YDL220C	PRO2	P54885	456 aa	Known RBP	7.36	□□□□□ -1.23
CDC13	YDL220C	AAD16	Q02895	342 aa		7.36	□□□□□ -1.23
CDC13	YDL220C	SRT1	Q03175	343 aa		7.36	□□□□□ -1.23
CDC13	YDL220C	YMR010W	Q03687	405 aa		7.36	□□□□□ -1.23
CDC13	YDL220C	TOS4	Q06266	489 aa		7.36	□□□□□ -1.23
CDC13	YDL220C	YLL007C	Q07799	665 aa		7.36	□□□□□ -1.23
CDC13	YDL220C	YLR031W	Q07978	186 aa		7.36	□□□□□ -1.23
CDC13	YDL220C	TRM11	Q12463	433 aa		7.36	□□□□□ -1.23
CDC13	YDL220C	PGA3	Q12746	312 aa	Known RBP	7.36	□□□□□ -1.23
CDC13	YDL220C	LEU2	P04173	364 aa	Predicted RBP	7.35	□□□□□ -1.23
CDC13	YDL220C	PMS1	P14242	873 aa		7.35	□□□□□ -1.23
CDC13	YDL220C	NCP1	P16603	691 aa	Known RBP	7.35	□□□□□ -1.23
CDC13	YDL220C	HNM1	P19807	563 aa		7.35	□□□□□ -1.23
CDC13	YDL220C	DBF2	P22204	572 aa		7.35	□□□□□ -1.23
CDC13	YDL220C	CAD1	P24813	409 aa	Known RBP	7.35	□□□□□ -1.23
CDC13	YDL220C	GLG1	P36143	616 aa		7.35	□□□□□ -1.23
CDC13	YDL220C	ADE17	P38009	592 aa	Known RBP	7.35	□□□□□ -1.23
CDC13	YDL220C	KEL1	P38853	1164 aa	Known RBP	7.35	□□□□□ -1.23
CDC13	YDL220C	BOI2	P39969	1040 aa		7.35	□□□□□ -1.23
CDC13	YDL220C	THP3	Q12049	470 aa	Known RBP	7.35	□□□□□ -1.23
CDC13	YDL220C	NCA2	Q12374	616 aa		7.35	□□□□□ -1.23
CDC13	YDL220C	SFL1	P20134	766 aa		7.35	□□□□□ -1.23
CDC13	YDL220C	VMA4	P22203	233 aa	Known RBP	7.35	□□□□□ -1.23
CDC13	YDL220C	MDJ1	P35191	511 aa		7.35	□□□□□ -1.23
CDC13	YDL220C	YET1	P35723	206 aa		7.35	□□□□□ -1.23
CDC13	YDL220C	MYO3	P36006	1272 aa		7.35	□□□□□ -1.23
CDC13	YDL220C	RRF1	P38771	230 aa		7.35	□□□□□ -1.23
CDC13	YDL220C	FMP33	P46998	180 aa		7.35	□□□□□ -1.23
CDC13	YDL220C	BNA3	P47039	444 aa	Known RBP	7.35	□□□□□ -1.23
CDC13	YDL220C	ORC3	P54790	616 aa		7.35	□□□□□ -1.23
CDC13	YDL220C	VTI1	Q04338	217 aa		7.35	□□□□□ -1.23
CDC13	YDL220C	YMR114C	Q04471	368 aa	Known RBP	7.35	□□□□□ -1.23
CDC13	YDL220C	RNH1	Q04740	348 aa		7.35	□□□□□ -1.23
CDC13	YDL220C	MLC2	Q06580	163 aa		7.35	□□□□□ -1.23

Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms