RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	TRP4	P07285	380 aa	Predicted RBP	7.06	□□□□□ -1.28
SIR2	YDL042C	SPC105	P53148	917 aa		7.06	□□□□□ -1.28
SIR2	YDL042C	GAD1	Q04792	585 aa		7.06	□□□□□ -1.28
SIR2	YDL042C	PYC1	P11154	1178 aa	Known RBP	7.06	□□□□□ -1.28
SIR2	YDL042C	IMG2	P25642	146 aa	Predicted RBP	7.06	□□□□□ -1.28
SIR2	YDL042C	UBP5	P39944	805 aa		7.06	□□□□□ -1.28
SIR2	YDL042C	NOP15	P53927	220 aa	Predicted RBP	7.06	□□□□□ -1.28
SIR2	YDL042C	SPT6	P23615	1451 aa	Known RBP	7.05	□□□□□ -1.28
SIR2	YDL042C	KAR1	P11927	433 aa		7.05	□□□□□ -1.28
SIR2	YDL042C	YKU70	P32807	602 aa		7.05	□□□□□ -1.28
SIR2	YDL042C	SER1	P33330	395 aa	Known RBP	7.05	□□□□□ -1.28
SIR2	YDL042C	SLD3	P53135	668 aa		7.05	□□□□□ -1.28
SIR2	YDL042C	TEX1	P53851	422 aa	Known RBP	7.05	□□□□□ -1.28
SIR2	YDL042C	TRZ1	P36159	838 aa	Predicted RBP	7.04	□□□□□ -1.28
SIR2	YDL042C	RNR4	P49723	345 aa	Known RBP	7.04	□□□□□ -1.28
SIR2	YDL042C	VHS3	Q08438	674 aa		7.04	□□□□□ -1.28
SIR2	YDL042C	PMA1	P05030	918 aa	Known RBP	7.03	□□□□□ -1.28
SIR2	YDL042C	GLN4	P13188	809 aa	Known RBP	7.03	□□□□□ -1.28
SIR2	YDL042C	COX11	P19516	300 aa	Known RBP	7.03	□□□□□ -1.28
SIR2	YDL042C	EMP65	P40085	556 aa		7.03	□□□□□ -1.28
SIR2	YDL042C	COX18	P53239	316 aa		7.03	□□□□□ -1.28
SIR2	YDL042C	TGL2	P54857	326 aa		7.03	□□□□□ -1.28
SIR2	YDL042C	DLT1	Q04216	342 aa		7.03	□□□□□ -1.28
SIR2	YDL042C	SLX4	Q12098	748 aa		7.03	□□□□□ -1.28
SIR2	YDL042C	HEM12	P32347	362 aa	Predicted RBP	7.03	□□□□□ -1.28
SIR2	YDL042C	NOP2	P40991	618 aa	Known RBP	7.03	□□□□□ -1.28
SIR2	YDL042C	ATG36	P46983	293 aa		7.03	□□□□□ -1.28
SIR2	YDL042C	AMA1	P50082	593 aa		7.03	□□□□□ -1.28
SIR2	YDL042C	YNL034W	P53963	612 aa		7.03	□□□□□ -1.28
SIR2	YDL042C	YNL018C	P53976	612 aa		7.03	□□□□□ -1.28
SIR2	YDL042C	HMO1	Q03973	246 aa	Known RBP	7.03	□□□□□ -1.28
SIR2	YDL042C	SGO1	Q08490	590 aa		7.03	□□□□□ -1.28
SIR2	YDL042C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	7.03	□□□□□ -1.28	not detected
SIR2	YDL042C	MET3	P08536	511 aa		7.02	□□□□□ -1.29
SIR2	YDL042C	RNR1	P21524	888 aa	Known RBP	7.02	□□□□□ -1.29
SIR2	YDL042C	YNL195C	P40168	261 aa		7.02	□□□□□ -1.29
SIR2	YDL042C	PHO23	P50947	330 aa		7.02	□□□□□ -1.29
SIR2	YDL042C	CTK1	Q03957	528 aa	Known RBP	7.02	□□□□□ -1.29
SIR2	YDL042C	PHM6	Q05637	104 aa		7.02	□□□□□ -1.29
SIR2	YDL042C	ATG11	Q12527	1178 aa		7.02	□□□□□ -1.29
SIR2	YDL042C	RPS17A	P02407	136 aa	Known RBP	7.01	□□□□□ -1.29
SIR2	YDL042C	RPS17B	P14127	136 aa	Known RBP	7.01	□□□□□ -1.29
SIR2	YDL042C	HCA4	P20448	770 aa	Known RBP	7.01	□□□□□ -1.29
SIR2	YDL042C	PET127	P32606	800 aa		7.01	□□□□□ -1.29
SIR2	YDL042C	PEA2	P40091	420 aa		7.01	□□□□□ -1.29
SIR2	YDL042C	RTS3	P53289	263 aa		7.01	□□□□□ -1.29
SIR2	YDL042C	YPS7	Q06325	596 aa		7.01	□□□□□ -1.29
SIR2	YDL042C	MPD2	Q99316	277 aa		7.01	□□□□□ -1.29
SIR2	YDL042C	LAT1	P12695	482 aa	Known RBP	7	□□□□□ -1.29
SIR2	YDL042C	CAF20	P12962	161 aa	Known RBP	7	□□□□□ -1.29
SIR2	YDL042C	FRS1	P15624	595 aa	Known RBP	7	□□□□□ -1.29
SIR2	YDL042C	DUN1	P39009	513 aa		7	□□□□□ -1.29
SIR2	YDL042C	VID28	P40547	921 aa		7	□□□□□ -1.29
SIR2	YDL042C	YIR042C	P40586	236 aa		7	□□□□□ -1.29
SIR2	YDL042C	BUL1	P48524	976 aa		7	□□□□□ -1.29
SIR2	YDL042C	MUP1	P50276	574 aa		7	□□□□□ -1.29
SIR2	YDL042C	ATP12	P22135	325 aa		7	□□□□□ -1.29
SIR2	YDL042C	ERG6	P25087	383 aa	Known RBP	7	□□□□□ -1.29
SIR2	YDL042C	HCM1	P25364	564 aa		7	□□□□□ -1.29
SIR2	YDL042C	CTS1	P29029	562 aa		7	□□□□□ -1.29
SIR2	YDL042C	SHM2	P37291	469 aa	Known RBP	7	□□□□□ -1.29
SIR2	YDL042C	ELO3	P40319	345 aa		7	□□□□□ -1.29
SIR2	YDL042C	IES1	P43579	692 aa		7	□□□□□ -1.29
SIR2	YDL042C	PEX15	Q08215	383 aa		7	□□□□□ -1.29
SIR2	YDL042C	HRP1	Q99383	534 aa	Known RBP	7	□□□□□ -1.29
SIR2	YDL042C	CDC26	P14724	124 aa		6.99	□□□□□ -1.29
SIR2	YDL042C	ECM38	Q05902	660 aa	Predicted RBP	6.99	□□□□□ -1.29
SIR2	YDL042C	AIM39	Q08223	395 aa		6.99	□□□□□ -1.29
SIR2	YDL042C	EFT1	P32324	842 aa	Known RBP	6.98	□□□□□ -1.29
SIR2	YDL042C	YBR053C	P38235	358 aa		6.98	□□□□□ -1.29
SIR2	YDL042C	DAS1	P47005	663 aa		6.98	□□□□□ -1.29
SIR2	YDL042C	NOP9	P47077	666 aa	Known RBP	6.98	□□□□□ -1.29
SIR2	YDL042C	MTL1	P53214	551 aa		6.98	□□□□□ -1.29
SIR2	YDL042C	RCR2	Q03446	210 aa	Known RBP	6.98	□□□□□ -1.29
SIR2	YDL042C	ECM3	Q99252	613 aa		6.98	□□□□□ -1.29
SIR2	YDL042C	ERG20	P08524	352 aa	Known RBP	6.97	□□□□□ -1.29
SIR2	YDL042C	BAP3	P41815	604 aa		6.97	□□□□□ -1.29
SIR2	YDL042C	VPS36	Q06696	566 aa		6.97	□□□□□ -1.29
SIR2	YDL042C	STP4	Q07351	490 aa		6.97	□□□□□ -1.29
SIR2	YDL042C	DIA2	Q08496	732 aa	Predicted RBP	6.97	□□□□□ -1.29
SIR2	YDL042C	NTO1	Q12311	748 aa		6.97	□□□□□ -1.29
SIR2	YDL042C	IME1	P21190	360 aa		6.96	□□□□□ -1.29
SIR2	YDL042C	TPM2	P40414	161 aa		6.96	□□□□□ -1.29
SIR2	YDL042C	RSC8	P43609	557 aa	Known RBP	6.96	□□□□□ -1.29
SIR2	YDL042C	VBA4	Q04602	768 aa	Known RBP	6.96	□□□□□ -1.29
SIR2	YDL042C	YOR378W	Q08902	515 aa		6.96	□□□□□ -1.29
SIR2	YDL042C	ATP4	P05626	244 aa		6.96	□□□□□ -1.3
SIR2	YDL042C	ERG4	P25340	473 aa		6.96	□□□□□ -1.3
SIR2	YDL042C	HRR25	P29295	494 aa	Known RBP	6.96	□□□□□ -1.3
SIR2	YDL042C	HIR1	P32479	840 aa		6.96	□□□□□ -1.3
SIR2	YDL042C	SEC6	P32844	805 aa		6.96	□□□□□ -1.3
SIR2	YDL042C	LYS9	P38999	446 aa		6.96	□□□□□ -1.3
SIR2	YDL042C	GET2	P40056	285 aa		6.96	□□□□□ -1.3
SIR2	YDL042C	HOS4	P40480	1083 aa		6.96	□□□□□ -1.3
SIR2	YDL042C	IRC24	P40580	263 aa		6.96	□□□□□ -1.3
SIR2	YDL042C	NGL1	Q08213	363 aa	Known RBP	6.96	□□□□□ -1.3
SIR2	YDL042C	NYV1	Q12255	253 aa		6.96	□□□□□ -1.3
SIR2	YDL042C	TRM13	Q12383	476 aa		6.96	□□□□□ -1.3
SIR2	YDL042C	SST2	P11972	698 aa	Known RBP	6.95	□□□□□ -1.3
SIR2	YDL042C	DGR2	P32330	852 aa		6.95	□□□□□ -1.3

Retrieved 100 of 5,963 RNA–protein pairs in 228.1 ms