RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C GIS3Q12418 502 aa7.24□□□□□ -1.25
TDP1YBR223C RRD2Q12461 358 aa7.24□□□□□ -1.25
TDP1YBR223C ECM3Q99252 613 aa7.24□□□□□ -1.25
TDP1YBR223C RRT12P25381 491 aa7.23□□□□□ -1.25
TDP1YBR223C PTC3P34221 468 aaKnown RBP7.23□□□□□ -1.25
TDP1YBR223C SWH1P35845 1188 aa7.23□□□□□ -1.25
TDP1YBR223C YGR125WP53273 1036 aa7.23□□□□□ -1.25
TDP1YBR223C SHE9Q04172 456 aa7.23□□□□□ -1.25
TDP1YBR223C ABP140Q08641 628 aaKnown RBP7.23□□□□□ -1.25
TDP1YBR223C YLR278CQ05854 1341 aa7.23□□□□□ -1.25
TDP1YBR223C BI2P03873 423 aa7.23□□□□□ -1.25
TDP1YBR223C BI4P03879 638 aa7.23□□□□□ -1.25
TDP1YBR223C YER152CP10356 443 aa7.23□□□□□ -1.25
TDP1YBR223C COX11P19516 300 aaKnown RBP7.23□□□□□ -1.25
TDP1YBR223C BAS1P22035 811 aa7.23□□□□□ -1.25
TDP1YBR223C IRE1P32361 1115 aa7.23□□□□□ -1.25
TDP1YBR223C TPO2P53283 614 aa7.23□□□□□ -1.25
TDP1YBR223C YPL109CQ02981 657 aa7.23□□□□□ -1.25
TDP1YBR223C BI3Q9ZZW7 517 aa7.23□□□□□ -1.25
TDP1YBR223C PDR1P12383 1068 aa7.22□□□□□ -1.25
TDP1YBR223C KIN82P25341 720 aa7.22□□□□□ -1.25
TDP1YBR223C KAR4P25583 335 aa7.22□□□□□ -1.25
TDP1YBR223C SPT5P27692 1063 aaKnown RBP7.22□□□□□ -1.25
TDP1YBR223C KIP2P28743 706 aa7.22□□□□□ -1.25
TDP1YBR223C TRM2P33753 639 aa7.22□□□□□ -1.25
TDP1YBR223C DUG2P38149 878 aa7.22□□□□□ -1.25
TDP1YBR223C VID24P38263 362 aa7.22□□□□□ -1.25
TDP1YBR223C VPS29P38759 282 aa7.22□□□□□ -1.25
TDP1YBR223C ALA1P40825 983 aaKnown RBP7.22□□□□□ -1.25
TDP1YBR223C TMA22P47089 198 aaPredicted RBP7.22□□□□□ -1.25
TDP1YBR223C HOP2P53187 214 aa7.22□□□□□ -1.25
TDP1YBR223C TRS130Q03660 1102 aa7.22□□□□□ -1.25
TDP1YBR223C PRM6Q04705 352 aa7.22□□□□□ -1.25
TDP1YBR223C SHS1Q07657 551 aa7.22□□□□□ -1.25
TDP1YBR223C YDR018CQ12185 396 aa7.22□□□□□ -1.25
TDP1YBR223C RAD10P06838 210 aa7.21□□□□□ -1.26
TDP1YBR223C TPS2P31688 896 aaKnown RBP7.21□□□□□ -1.26
TDP1YBR223C EFT1P32324 842 aaKnown RBP7.21□□□□□ -1.26
TDP1YBR223C MVD1P32377 396 aaKnown RBP7.21□□□□□ -1.26
TDP1YBR223C PEX2P32800 271 aa7.21□□□□□ -1.26
TDP1YBR223C MRE11P32829 692 aa7.21□□□□□ -1.26
TDP1YBR223C RIM101P33400 625 aa7.21□□□□□ -1.26
TDP1YBR223C YBP1P38315 674 aa7.21□□□□□ -1.26
TDP1YBR223C SPC97P38863 823 aa7.21□□□□□ -1.26
TDP1YBR223C KHA1P40309 873 aa7.21□□□□□ -1.26
TDP1YBR223C MKT1P40850 830 aaKnown RBP7.21□□□□□ -1.26
TDP1YBR223C EMW1P42842 904 aaKnown RBP7.21□□□□□ -1.26
TDP1YBR223C ACF4P47129 309 aa7.21□□□□□ -1.26
TDP1YBR223C RSM26P47141 266 aa7.21□□□□□ -1.26
TDP1YBR223C KTR5P53966 522 aaPredicted RBP7.21□□□□□ -1.26
TDP1YBR223C GPD1Q00055 391 aaKnown RBP7.21□□□□□ -1.26
TDP1YBR223C MAG2Q06436 670 aaKnown RBP7.21□□□□□ -1.26
TDP1YBR223C ALR1Q08269 859 aa7.21□□□□□ -1.26
TDP1YBR223C YLL058WQ12198 575 aa7.21□□□□□ -1.26
TDP1YBR223C TY4A-HQ6Q5P6 413 aa7.21□□□□□ -1.26
TDP1YBR223C TRX1P22217 103 aaKnown RBP7.2□□□□□ -1.26
TDP1YBR223C DPH2P32461 534 aa7.2□□□□□ -1.26
TDP1YBR223C SSE1P32589 693 aaKnown RBP7.2□□□□□ -1.26
TDP1YBR223C TMT1P32643 299 aa7.2□□□□□ -1.26
TDP1YBR223C PAM1P37304 830 aaKnown RBP7.2□□□□□ -1.26
TDP1YBR223C MMS4P38257 691 aa7.2□□□□□ -1.26
TDP1YBR223C PCM1P38628 557 aaKnown RBP7.2□□□□□ -1.26
TDP1YBR223C PEA2P40091 420 aa7.2□□□□□ -1.26
TDP1YBR223C RIO2P40160 425 aaKnown RBP7.2□□□□□ -1.26
TDP1YBR223C HLJ1P48353 224 aa7.2□□□□□ -1.26
TDP1YBR223C PSP2P50109 593 aaKnown RBP7.2□□□□□ -1.26
TDP1YBR223C TAF6P53040 516 aa7.2□□□□□ -1.26
TDP1YBR223C CWC15Q03772 175 aaKnown RBP7.2□□□□□ -1.26
TDP1YBR223C MSH6Q03834 1242 aa7.2□□□□□ -1.26
TDP1YBR223C SXM1Q04175 944 aaKnown RBP7.2□□□□□ -1.26
TDP1YBR223C YLR177WQ06251 628 aa7.2□□□□□ -1.26
TDP1YBR223C CDC73Q06697 393 aa7.2□□□□□ -1.26
TDP1YBR223C FAP7Q12055 197 aaPredicted RBP7.2□□□□□ -1.26
TDP1YBR223C RIB2Q12362 591 aaKnown RBP7.2□□□□□ -1.26
TDP1YBR223C CDC24P11433 854 aaPredicted RBP7.19□□□□□ -1.26
TDP1YBR223C VAN1P23642 535 aa7.19□□□□□ -1.26
TDP1YBR223C PKC1P24583 1151 aa7.19□□□□□ -1.26
TDP1YBR223C STE13P33894 931 aa7.19□□□□□ -1.26
TDP1YBR223C YBR032WP38223 100 aa7.19□□□□□ -1.26
TDP1YBR223C HSM3P38348 480 aa7.19□□□□□ -1.26
TDP1YBR223C QNS1P38795 714 aaKnown RBP7.19□□□□□ -1.26
TDP1YBR223C LIN1P38852 340 aaPredicted RBP7.19□□□□□ -1.26
TDP1YBR223C REV7P38927 245 aa7.19□□□□□ -1.26
TDP1YBR223C PNT1P38969 423 aa7.19□□□□□ -1.26
TDP1YBR223C ARG2P40360 574 aa7.19□□□□□ -1.26
TDP1YBR223C NET1P47035 1189 aa7.19□□□□□ -1.26
TDP1YBR223C RPS7BP48164 190 aaKnown RBP7.19□□□□□ -1.26
TDP1YBR223C PUS2P53167 370 aa7.19□□□□□ -1.26
TDP1YBR223C UBX4P54730 416 aa7.19□□□□□ -1.26
TDP1YBR223C TFB2Q02939 513 aa7.19□□□□□ -1.26
TDP1YBR223C YLR455WQ06188 304 aa7.19□□□□□ -1.26
TDP1YBR223C ECM7Q06200 448 aa7.19□□□□□ -1.26
TDP1YBR223C CFT2Q12102 859 aaPredicted RBP7.19□□□□□ -1.26
TDP1YBR223C GAL10P04397 699 aa7.19□□□□□ -1.26
TDP1YBR223C PWP1P21304 576 aaKnown RBP7.19□□□□□ -1.26
TDP1YBR223C SLY1P22213 666 aa7.19□□□□□ -1.26
TDP1YBR223C EFB1P32471 206 aaKnown RBP7.19□□□□□ -1.26
TDP1YBR223C IXR1P33417 597 aa7.19□□□□□ -1.26
TDP1YBR223C MSR1P38714 643 aa7.19□□□□□ -1.26
TDP1YBR223C SMF2P38778 549 aa7.19□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms