RNA–Protein interactions for RNA: YBR055C

PRP6, Transcript of Splicing factor, yeastyeast

Gene PRP6, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP6YBR055C CLF1Q12309 687 aaPredicted RBP2.73□□□□□ -1.97
PRP6YBR055C MED1Q12321 566 aa2.73□□□□□ -1.97
PRP6YBR055C RIB2Q12362 591 aaKnown RBP2.73□□□□□ -1.97
PRP6YBR055C RTP1Q12751 981 aa2.73□□□□□ -1.97
PRP6YBR055C NGG1P32494 702 aa2.73□□□□□ -1.97
PRP6YBR055C NFU1P32860 256 aa2.73□□□□□ -1.97
PRP6YBR055C SEG2P34250 1132 aa2.73□□□□□ -1.97
PRP6YBR055C RRN3P36070 627 aa2.73□□□□□ -1.97
PRP6YBR055C ABZ1P37254 787 aaPredicted RBP2.73□□□□□ -1.97
PRP6YBR055C AKL1P38080 1108 aaKnown RBP2.73□□□□□ -1.97
PRP6YBR055C APN2P38207 520 aa2.73□□□□□ -1.97
PRP6YBR055C SRP68P38687 599 aaKnown RBP2.73□□□□□ -1.97
PRP6YBR055C MIP6P38760 659 aaKnown RBP2.73□□□□□ -1.97
PRP6YBR055C RAD26P40352 1085 aa2.73□□□□□ -1.97
PRP6YBR055C ESL1P40456 1118 aa2.73□□□□□ -1.97
PRP6YBR055C SET2P46995 733 aaKnown RBP2.73□□□□□ -1.97
PRP6YBR055C YPS7Q06325 596 aa2.73□□□□□ -1.97
PRP6YBR055C TRE1Q08919 783 aa2.73□□□□□ -1.97
PRP6YBR055C AI3P03877 415 aa2.72□□□□□ -1.97
PRP6YBR055C CDC31P06704 161 aaKnown RBP2.72□□□□□ -1.97
PRP6YBR055C NUC1P08466 329 aa2.72□□□□□ -1.97
PRP6YBR055C CBP3P21560 335 aa2.72□□□□□ -1.97
PRP6YBR055C SAK1P38990 1142 aa2.72□□□□□ -1.97
PRP6YBR055C SWD1P39706 426 aa2.72□□□□□ -1.97
PRP6YBR055C IMA5P40884 581 aa2.72□□□□□ -1.97
PRP6YBR055C BNA1P47096 177 aa2.72□□□□□ -1.97
PRP6YBR055C PSP2P50109 593 aaKnown RBP2.72□□□□□ -1.97
PRP6YBR055C EXG2P52911 562 aa2.72□□□□□ -1.97
PRP6YBR055C MSC2Q03455 724 aa2.72□□□□□ -1.97
PRP6YBR055C DPH6Q12429 685 aa2.72□□□□□ -1.97
PRP6YBR055C ENT1Q12518 454 aa2.72□□□□□ -1.97
PRP6YBR055C VAS1P07806 1104 aaKnown RBP2.72□□□□□ -1.97
PRP6YBR055C SAN1P22470 610 aa2.72□□□□□ -1.97
PRP6YBR055C GAR1P28007 205 aaKnown RBP2.72□□□□□ -1.97
PRP6YBR055C LRG1P35688 1017 aa2.72□□□□□ -1.97
PRP6YBR055C YHR078WP38799 552 aa2.72□□□□□ -1.97
PRP6YBR055C PEX7P39108 375 aa2.72□□□□□ -1.97
PRP6YBR055C KAP123P40069 1113 aaKnown RBP2.72□□□□□ -1.97
PRP6YBR055C SRB7P47822 140 aa2.72□□□□□ -1.97
PRP6YBR055C MRPL13Q02204 264 aa2.72□□□□□ -1.97
PRP6YBR055C EIS1Q05050 843 aaKnown RBP2.72□□□□□ -1.97
PRP6YBR055C HPF1Q05164 967 aa2.72□□□□□ -1.97
PRP6YBR055C ISA1Q07821 250 aaPredicted RBP2.72□□□□□ -1.97
PRP6YBR055C VTS1Q08831 523 aaKnown RBP RIP-Chip data2.72□□□□□ -1.97not detected
PRP6YBR055C PHO5P00635 467 aa2.71□□□□□ -1.98
PRP6YBR055C ADP1P25371 1049 aa2.71□□□□□ -1.98
PRP6YBR055C MUD2P36084 527 aaKnown RBP2.71□□□□□ -1.98
PRP6YBR055C LAM1P38851 1228 aa2.71□□□□□ -1.98
PRP6YBR055C OYE3P41816 400 aaPredicted RBP2.71□□□□□ -1.98
PRP6YBR055C PRY1P47032 299 aa2.71□□□□□ -1.98
PRP6YBR055C PUF3Q07807 879 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
PRP6YBR055C RTK1Q12100 620 aaPredicted RBP2.71□□□□□ -1.98
PRP6YBR055C SPE1P08432 466 aa2.71□□□□□ -1.98
PRP6YBR055C NCP1P16603 691 aaKnown RBP2.71□□□□□ -1.98
PRP6YBR055C IMP2'P32351 346 aa2.71□□□□□ -1.98
PRP6YBR055C XRS2P33301 854 aa2.71□□□□□ -1.98
PRP6YBR055C YHR033WP38690 423 aa2.71□□□□□ -1.98
PRP6YBR055C VPS8P39702 1274 aa2.71□□□□□ -1.98
PRP6YBR055C PZF1P39933 429 aa2.71□□□□□ -1.98
PRP6YBR055C YEL068CP39977 110 aa2.71□□□□□ -1.98
PRP6YBR055C PUG1P40100 303 aa2.71□□□□□ -1.98
PRP6YBR055C PSF2P40359 213 aa2.71□□□□□ -1.98
PRP6YBR055C ENP2P48234 707 aaKnown RBP2.71□□□□□ -1.98
PRP6YBR055C WHI4Q07655 649 aaKnown RBP2.71□□□□□ -1.98
PRP6YBR055C VHS3Q08438 674 aa2.71□□□□□ -1.98
PRP6YBR055C SGO1Q08490 590 aa2.71□□□□□ -1.98
PRP6YBR055C GUK1P15454 187 aaKnown RBP2.7□□□□□ -1.98
PRP6YBR055C YCL049CP25577 312 aa2.7□□□□□ -1.98
PRP6YBR055C MF(ALPHA)2P32435 120 aa2.7□□□□□ -1.98
PRP6YBR055C RPT3P33298 428 aaKnown RBP2.7□□□□□ -1.98
PRP6YBR055C TAF5P38129 798 aa2.7□□□□□ -1.98
PRP6YBR055C CTF8P38877 133 aa2.7□□□□□ -1.98
PRP6YBR055C AXL2P38928 823 aa2.7□□□□□ -1.98
PRP6YBR055C SDP1P40479 209 aa2.7□□□□□ -1.98
PRP6YBR055C PUS4P48567 403 aaKnown RBP2.7□□□□□ -1.98
PRP6YBR055C ARI1P53111 347 aaKnown RBP2.7□□□□□ -1.98
PRP6YBR055C YBP2P53169 641 aa2.7□□□□□ -1.98
PRP6YBR055C YGR035CP53222 116 aa2.7□□□□□ -1.98
PRP6YBR055C CPR6P53691 371 aaKnown RBP2.7□□□□□ -1.98
PRP6YBR055C SSY1Q03770 852 aa2.7□□□□□ -1.98
PRP6YBR055C SPC19Q03954 165 aa2.7□□□□□ -1.98
PRP6YBR055C SIZ1Q04195 904 aa2.7□□□□□ -1.98
PRP6YBR055C STP4Q07351 490 aa2.7□□□□□ -1.98
PRP6YBR055C DBP10Q12389 995 aaKnown RBP2.7□□□□□ -1.98
PRP6YBR055C AI1P03875 834 aa2.7□□□□□ -1.98
PRP6YBR055C FBP1P09201 348 aa2.7□□□□□ -1.98
PRP6YBR055C PYC1P11154 1178 aaKnown RBP2.7□□□□□ -1.98
PRP6YBR055C AAC3P18238 307 aa2.7□□□□□ -1.98
PRP6YBR055C CLB4P24871 460 aa2.7□□□□□ -1.98
PRP6YBR055C STT3P39007 718 aaKnown RBP2.7□□□□□ -1.98
PRP6YBR055C DPH1P40487 425 aaKnown RBP2.7□□□□□ -1.98
PRP6YBR055C PFA3P42836 336 aa2.7□□□□□ -1.98
PRP6YBR055C MNT2P53059 558 aa2.7□□□□□ -1.98
PRP6YBR055C COX18P53239 316 aa2.7□□□□□ -1.98
PRP6YBR055C VID22Q05934 901 aa2.7□□□□□ -1.98
PRP6YBR055C SGD1Q06132 899 aa2.7□□□□□ -1.98
PRP6YBR055C YDL176WQ12027 708 aa2.7□□□□□ -1.98
PRP6YBR055C SNF1P06782 633 aaKnown RBP2.7□□□□□ -1.98
PRP6YBR055C POL3P15436 1097 aa2.7□□□□□ -1.98
PRP6YBR055C ACO1P19414 778 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98not detected
Retrieved 100 of 5,963 RNA–protein pairs in 162.4 ms