RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Ccdc138Q0VF22 680 aa11.17□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Epc1Q8C9X6 813 aa11.17□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Usp27Q8CEG8 438 aa11.17□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 LgsnQ8CIX8 563 aa11.17□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Tmed5Q9CXE7 229 aa11.17□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Armc9Q9D2I5 817 aa11.17□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 PigoQ9JJI6 1093 aa11.17□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Pdzrn4E9PUZ9 1014 aa11.17□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Myo1aO88329 1043 aa11.17□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Sem1P60897 70 aa11.17□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Gng11P61953 73 aa11.17□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Klra6Q60653 266 aa11.17□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 EsrrbQ61539 433 aa11.17□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Tgs1Q923W1 853 aa11.17□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Syf2Q9D198 242 aaKnown RBP11.17□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Spata1Q9D5R4 444 aa11.17□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Bub1bQ9Z1S0 1052 aa11.17□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Eif2ak3Q9Z2B5 1114 aa11.17□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Fgd6Q69ZL1 1399 aa11.17□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Cep85lA0A1W2P884 806 aa11.16□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Folh1O35409 752 aa11.16□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Q66JV7 365 aa11.16□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Atp1a2Q6PIE5 1020 aa11.16□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Ppp2r2cQ8BG02 447 aa11.16□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Hook1Q8BIL5 728 aa11.16□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Sgsm3Q8VCZ6 750 aa11.16□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 HypkQ9CR41 129 aa11.16□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Uchl5Q9WUP7 329 aa11.16□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Sipa1l1Q8C0T5 1782 aa11.16□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Ccdc152E9PX14 254 aa11.16□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Hoxa7P02830 229 aa11.16□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 CalcaP70160 136 aa11.16□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Sap30bpQ02614 308 aa11.16□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Specc1lQ2KN98 1118 aaKnown RBP11.16□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Psmd1Q3TXS7 953 aa11.16□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 AmphQ7TQF7 686 aa11.16□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Zc3h6Q8BYK8 1177 aa11.16□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Cd209bQ8CJ91 325 aa11.16□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 PawrQ925B0 333 aa11.16□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Chd2E9PZM4 1827 aaKnown RBP11.16□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Kiaa0556Q8C753 1610 aa11.15□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 PxdnQ3UQ28 1475 aa11.15□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Dnajc21E9Q8D0 531 aa11.15□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Eef2kO08796 724 aa11.15□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Ptpdc1Q6NZK8 747 aa11.15□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Brd3Q8K2F0 726 aaKnown RBP11.15□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Arl8aQ8VEH3 186 aa11.15□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Srgap1Q91Z69 1062 aa11.15□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Xrcc4Q924T3 326 aa11.15□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 PdclQ9DBX2 301 aa11.15□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Snx1Q9WV80 522 aa11.15□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Abcc1O35379 1528 aa11.15□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Cdc42bpbQ7TT50 1713 aa11.15□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Cacna2d1O08532 1103 aa11.15□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Cct2P80314 535 aaKnown RBP11.15□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 B4galnt4Q766D5 1034 aa11.15□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Acad11Q80XL6 779 aa11.15□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Ythdf3Q8BYK6 585 aaKnown RBP11.15□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Armcx6Q8K3A6 301 aa11.15□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Thoc1Q8R3N6 657 aaKnown RBP11.15□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Cdc37l1Q9CZP7 335 aa11.15□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Trove2O08848 538 aa11.14□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Diaph2O70566 1098 aa11.14□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Csrnp1P59054 583 aa11.14□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Vsnl1P62761 191 aa11.14□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Erich5Q8K0S2 362 aa11.14□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Golph3lQ8R088 285 aaKnown RBP11.14□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Mtmr6Q8VE11 617 aa11.14□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Ranbp17Q99NF8 1088 aa11.14□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Tbc1d7Q9D0K0 293 aa11.14□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Lmtk3Q5XJV6 1424 aa11.14□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Mroh2aD3Z750 1679 aa11.14□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Rgs22G3UYX5 1258 aa11.14□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 M6prP24668 278 aa11.14□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Btbd11Q6GQW0 1109 aa11.14□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Ppp1r12aQ9DBR7 1029 aaKnown RBP11.14□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Mybbp1aQ7TPV4 1344 aaKnown RBP11.14□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Trim30cD3YVI9 513 aa11.13□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 XpcP51612 930 aa11.13□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Prpf38aQ4FK66 312 aaKnown RBP11.13□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Fchsd1Q6PFY1 688 aa11.13□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Tubb2aQ7TMM9 445 aa11.13□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 PolnQ7TQ07 864 aa11.13□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 AopepQ8BXQ6 817 aa11.13□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Nat10Q8K224 1024 aaKnown RBP11.13□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 ParnQ8VDG3 624 aa11.13□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Tubb2bQ9CWF2 445 aa11.13□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Gm32742A0A1B0GT42 1604 aa11.13□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Myo3bQ1EG27 1305 aa11.13□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Ccdc191J3QQ27 883 aa11.13□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Hmox1P14901 289 aa11.13□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Gspt2Q149F3 632 aa11.13□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Clul1Q3ZRW6 464 aa11.13□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 BcrQ6PAJ1 1270 aa11.13□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Ankrd24Q80VM7 985 aa11.13□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Pcdhb15Q91Y04 786 aa11.13□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Bloc1s2Q9CWG9 143 aa11.13□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Ehd4Q9EQP2 541 aa11.13□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Nsd2Q8BVE8 1365 aa11.13□□□□□ -0.63
Hmgb1-201ENSMUST00000085546 Cdk5rap2Q8K389 1822 aa11.13□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 24.1 ms