Protein–RNA interactions for Protein: O08532

Cacna2d1, Voltage-dependent calcium channel subunit alpha-2/delta-1, mousemouse

Predictions only

Length 1,103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna2d1O08532 Gm25239-201ENSMUST00000174915 86 ntBASIC39.92■■■■□ 3.98
Cacna2d1O08532 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.84■■■■□ 3.49
Cacna2d1O08532 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
Cacna2d1O08532 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
Cacna2d1O08532 Gm15042-201ENSMUST00000120212 883 ntBASIC35.03■■■■□ 3.2
Cacna2d1O08532 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
Cacna2d1O08532 Gm24109-201ENSMUST00000175489 103 ntBASIC34.56■■■■□ 3.12
Cacna2d1O08532 Gm15045-201ENSMUST00000117359 883 ntBASIC34.36■■■■□ 3.09
Cacna2d1O08532 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.16■■■■□ 3.06
Cacna2d1O08532 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
Cacna2d1O08532 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.67■■■□□ 2.98
Cacna2d1O08532 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Cacna2d1O08532 Gm23366-201ENSMUST00000175022 89 ntBASIC33.3■■■□□ 2.92
Cacna2d1O08532 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
Cacna2d1O08532 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Cacna2d1O08532 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Cacna2d1O08532 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.88■■■□□ 2.85
Cacna2d1O08532 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Cacna2d1O08532 Psd-208ENSMUST00000224556 2034 ntBASIC32.67■■■□□ 2.82
Cacna2d1O08532 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Cacna2d1O08532 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
Cacna2d1O08532 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Cacna2d1O08532 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
Cacna2d1O08532 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Cacna2d1O08532 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
Cacna2d1O08532 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.31■■■□□ 2.76
Cacna2d1O08532 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.27■■■□□ 2.76
Cacna2d1O08532 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Cacna2d1O08532 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.16■■■□□ 2.74
Cacna2d1O08532 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.12■■■□□ 2.73
Cacna2d1O08532 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.04■■■□□ 2.72
Cacna2d1O08532 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.01■■■□□ 2.71
Cacna2d1O08532 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.7■■■□□ 2.67
Cacna2d1O08532 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Cacna2d1O08532 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Cacna2d1O08532 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Cacna2d1O08532 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.59■■■□□ 2.65
Cacna2d1O08532 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Cacna2d1O08532 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Cacna2d1O08532 Gm25238-201ENSMUST00000174914 89 ntBASIC31.49■■■□□ 2.63
Cacna2d1O08532 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.62
Cacna2d1O08532 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Cacna2d1O08532 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.32■■■□□ 2.6
Cacna2d1O08532 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Cacna2d1O08532 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Cacna2d1O08532 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.95■■■□□ 2.54
Cacna2d1O08532 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Cacna2d1O08532 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Cacna2d1O08532 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Cacna2d1O08532 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Cacna2d1O08532 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.84■■■□□ 2.53
Cacna2d1O08532 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
Cacna2d1O08532 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.78■■■□□ 2.52
Cacna2d1O08532 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.77■■■□□ 2.52
Cacna2d1O08532 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Cacna2d1O08532 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Cacna2d1O08532 Gm27325-201ENSMUST00000175467 74 ntBASIC30.74■■■□□ 2.51
Cacna2d1O08532 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
Cacna2d1O08532 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Cacna2d1O08532 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Cacna2d1O08532 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.43■■■□□ 2.46
Cacna2d1O08532 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.43■■■□□ 2.46
Cacna2d1O08532 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Cacna2d1O08532 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.34■■■□□ 2.45
Cacna2d1O08532 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Cacna2d1O08532 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.3■■■□□ 2.44
Cacna2d1O08532 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
Cacna2d1O08532 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.3■■■□□ 2.44
Cacna2d1O08532 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Cacna2d1O08532 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Cacna2d1O08532 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Cacna2d1O08532 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Cacna2d1O08532 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
Cacna2d1O08532 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Cacna2d1O08532 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Cacna2d1O08532 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
Cacna2d1O08532 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Cacna2d1O08532 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
Cacna2d1O08532 Rab21-202ENSMUST00000218831 843 ntBASIC30.03■■■□□ 2.4
Cacna2d1O08532 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Cacna2d1O08532 Gm25262-201ENSMUST00000174934 133 ntBASIC29.97■■■□□ 2.39
Cacna2d1O08532 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.95■■■□□ 2.39
Cacna2d1O08532 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.94■■■□□ 2.38
Cacna2d1O08532 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.94■■■□□ 2.38
Cacna2d1O08532 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Cacna2d1O08532 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.92■■■□□ 2.38
Cacna2d1O08532 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.91■■■□□ 2.38
Cacna2d1O08532 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Cacna2d1O08532 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
Cacna2d1O08532 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Cacna2d1O08532 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
Cacna2d1O08532 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.36
Cacna2d1O08532 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.76■■■□□ 2.35
Cacna2d1O08532 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Cacna2d1O08532 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
Cacna2d1O08532 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Cacna2d1O08532 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.62■■■□□ 2.33
Cacna2d1O08532 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
Cacna2d1O08532 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Cacna2d1O08532 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms