RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 SRP1Q02821 542 aaKnown RBP0.32□□□□□ -2.36
snR53snR53 CRC1Q12289 327 aa0.32□□□□□ -2.36
snR53snR53 THR1P17423 357 aaKnown RBP0.31□□□□□ -2.36
snR53snR53 AAD3P25612 363 aa0.31□□□□□ -2.36
snR53snR53 CDC12P32468 407 aaKnown RBP0.31□□□□□ -2.36
snR53snR53 SAK1P38990 1142 aa0.31□□□□□ -2.36
snR53snR53 YMR124WP39523 943 aaKnown RBP0.31□□□□□ -2.36
snR53snR53 LYS20P48570 428 aaKnown RBP0.31□□□□□ -2.36
snR53snR53 VPS36Q06696 566 aa0.31□□□□□ -2.36
snR53snR53 RFA1P22336 621 aaKnown RBP0.3□□□□□ -2.36
snR53snR53 RAD27P26793 382 aa0.3□□□□□ -2.36
snR53snR53 FMO1P38866 432 aa0.3□□□□□ -2.36
snR53snR53 TEX1P53851 422 aaKnown RBP0.3□□□□□ -2.36
snR53snR53 ARG7Q04728 441 aa0.3□□□□□ -2.36
snR53snR53 MDM20Q12387 796 aaKnown RBP0.3□□□□□ -2.36
snR53snR53 TPK2P06245 380 aa0.29□□□□□ -2.36
snR53snR53 INO1P11986 533 aa0.29□□□□□ -2.36
snR53snR53 URE2P23202 354 aaKnown RBP0.29□□□□□ -2.36
snR53snR53 YKL107WP34251 309 aa0.29□□□□□ -2.36
snR53snR53 YKR078WP36158 585 aaKnown RBP0.29□□□□□ -2.36
snR53snR53 ERP5P38819 212 aa0.29□□□□□ -2.36
snR53snR53 YEL068CP39977 110 aa0.29□□□□□ -2.36
snR53snR53 PFA3P42836 336 aa0.29□□□□□ -2.36
snR53snR53 YKE2P52553 114 aa0.29□□□□□ -2.36
snR53snR53 HDA1P53973 706 aa0.29□□□□□ -2.36
snR53snR53 GAD1Q04792 585 aa0.29□□□□□ -2.36
snR53snR53 MTL1P53214 551 aa0.28□□□□□ -2.36
snR53snR53 IDP3P53982 420 aaKnown RBP0.28□□□□□ -2.36
snR53snR53 SRD1P09007 221 aa0.27□□□□□ -2.37
snR53snR53 YCR043CP25361 127 aa0.27□□□□□ -2.37
snR53snR53 KSP1P38691 1029 aaKnown RBP0.27□□□□□ -2.37
snR53snR53 YIL024CP40543 189 aa0.27□□□□□ -2.37
snR53snR53 HOS2P53096 452 aaPredicted RBP0.27□□□□□ -2.37
snR53snR53 YGR151CP53287 111 aa0.27□□□□□ -2.37
snR53snR53 ZRT2Q12436 422 aa0.27□□□□□ -2.37
snR53snR53 RKM4Q12504 494 aa0.27□□□□□ -2.37
snR53snR53 RPS9AO13516 197 aaKnown RBP0.26□□□□□ -2.37
snR53snR53 YEL076C-AP0CX16 216 aa0.26□□□□□ -2.37
snR53snR53 YLR464WP0CX17 216 aa0.26□□□□□ -2.37
snR53snR53 YER190C-BP0CX94 160 aa0.26□□□□□ -2.37
snR53snR53 YEL077W-AP0CX95 160 aa0.26□□□□□ -2.37
snR53snR53 YGR296C-BP0CX96 160 aa0.26□□□□□ -2.37
snR53snR53 YPL283W-BP0CX97 160 aa0.26□□□□□ -2.37
snR53snR53 YPR204C-AP0CX98 160 aa0.26□□□□□ -2.37
snR53snR53 YCP4P25349 247 aaKnown RBP0.26□□□□□ -2.37
snR53snR53 YBR238CP38330 731 aaKnown RBP0.26□□□□□ -2.37
snR53snR53 SIC1P38634 284 aa0.26□□□□□ -2.37
snR53snR53 MTG2P38860 518 aa0.26□□□□□ -2.37
snR53snR53 NUP60P39705 539 aa0.26□□□□□ -2.37
snR53snR53 YEL076CP39971 216 aa0.26□□□□□ -2.37
snR53snR53 SSY5P47002 699 aa0.26□□□□□ -2.37
snR53snR53 DUS3Q06053 668 aaKnown RBP0.26□□□□□ -2.37
snR53snR53 PUF2Q12221 1075 aaKnown RBP RIP-Chip data0.26□□□□□ -2.37not detected
snR53snR53 LAM4P38800 1345 aa0.25□□□□□ -2.37
snR53snR53 RPT1P33299 467 aaKnown RBP0.25□□□□□ -2.37
snR53snR53 PET112P33893 541 aa0.25□□□□□ -2.37
snR53snR53 IRR1P40541 1150 aa0.25□□□□□ -2.37
snR53snR53 YIR016WP40572 265 aa0.25□□□□□ -2.37
snR53snR53 TES1P41903 349 aaKnown RBP0.25□□□□□ -2.37
snR53snR53 RGC1Q06108 1083 aaKnown RBP0.25□□□□□ -2.37
snR53snR53 HAL9Q12180 1030 aa0.25□□□□□ -2.37
snR53snR53 TRP2P00899 507 aaKnown RBP0.24□□□□□ -2.37
snR53snR53 YMR085WP0CF18 432 aa0.24□□□□□ -2.37
snR53snR53 MET4P32389 672 aa0.24□□□□□ -2.37
snR53snR53 LYP1P32487 611 aa0.24□□□□□ -2.37
snR53snR53 YEL1P34225 687 aa0.24□□□□□ -2.37
snR53snR53 YBR259WP38338 688 aa0.24□□□□□ -2.37
snR53snR53 LYS9P38999 446 aa0.24□□□□□ -2.37
snR53snR53 PMT6P42934 759 aa0.24□□□□□ -2.37
snR53snR53 IMP4P53941 290 aaKnown RBP0.24□□□□□ -2.37
snR53snR53 BOP3P53958 396 aa0.24□□□□□ -2.37
snR53snR53 CTK1Q03957 528 aaKnown RBP0.24□□□□□ -2.37
snR53snR53 IZH3Q07959 543 aa0.24□□□□□ -2.37
snR53snR53 YBL113CQ7M4S9 792 aa0.24□□□□□ -2.37
snR53snR53 RAD2P07276 1031 aa0.23□□□□□ -2.37
snR53snR53 NPP1P25353 742 aa0.23□□□□□ -2.37
snR53snR53 URA1P28272 314 aaPredicted RBP0.23□□□□□ -2.37
snR53snR53 VRG4P40107 337 aa0.23□□□□□ -2.37
snR53snR53 ROK1P45818 564 aaPredicted RBP0.23□□□□□ -2.37
snR53snR53 BMS1Q08965 1183 aaKnown RBP0.23□□□□□ -2.37
snR53snR53 AIM44Q99299 758 aa0.23□□□□□ -2.37
snR53snR53 RPL42AP0CX27 106 aaKnown RBP0.22□□□□□ -2.37
snR53snR53 RPL42BP0CX28 106 aaKnown RBP0.22□□□□□ -2.37
snR53snR53 ABF1P14164 731 aa0.22□□□□□ -2.37
snR53snR53 MKT1P40850 830 aaKnown RBP0.22□□□□□ -2.37
snR53snR53 MDV1P47025 714 aa0.22□□□□□ -2.37
snR53snR53 YGR122WP53272 402 aa0.22□□□□□ -2.37
snR53snR53 RPL34AP87262 121 aaPredicted RBP0.22□□□□□ -2.37
snR53snR53 TIP41Q12199 356 aa0.22□□□□□ -2.37
snR53snR53 LDB16P25587 256 aa0.21□□□□□ -2.38
snR53snR53 PPZ1P26570 692 aa0.21□□□□□ -2.38
snR53snR53 YHR097CP38809 366 aaKnown RBP0.21□□□□□ -2.38
snR53snR53 YIL152WP40455 235 aa0.21□□□□□ -2.38
snR53snR53 OPT1P40897 799 aa0.21□□□□□ -2.38
snR53snR53 SAD1P43589 448 aa0.21□□□□□ -2.38
snR53snR53 ATG36P46983 293 aa0.21□□□□□ -2.38
snR53snR53 IGO1P53897 168 aa0.21□□□□□ -2.38
snR53snR53 RPL15BP54780 204 aaPredicted RBP0.21□□□□□ -2.38
snR53snR53 YLR225CQ05948 407 aaKnown RBP0.21□□□□□ -2.38
snR53snR53 RTT10Q08924 1013 aa0.21□□□□□ -2.38
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms