RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 CTK1Q03957 528 aaKnown RBP0.42□□□□□ -2.34
snR38snR38 YMR317WQ04893 1140 aa0.42□□□□□ -2.34
snR38snR38 NUT2Q06213 157 aa0.42□□□□□ -2.34
snR38snR38 VPS36Q06696 566 aa0.42□□□□□ -2.34
snR38snR38 BMS1Q08965 1183 aaKnown RBP0.42□□□□□ -2.34
snR38snR38 CRC1Q12289 327 aa0.42□□□□□ -2.34
snR38snR38 FRT1Q99332 602 aa0.42□□□□□ -2.34
snR38snR38 RPS9AO13516 197 aaKnown RBP0.41□□□□□ -2.34
snR38snR38 TPK2P06245 380 aa0.41□□□□□ -2.34
snR38snR38 YAP1P19880 650 aaKnown RBP0.41□□□□□ -2.34
snR38snR38 URE2P23202 354 aaKnown RBP0.41□□□□□ -2.34
snR38snR38 RPD3P32561 433 aa0.41□□□□□ -2.34
snR38snR38 RER2P35196 286 aa0.41□□□□□ -2.34
snR38snR38 SIC1P38634 284 aa0.41□□□□□ -2.34
snR38snR38 VRG4P40107 337 aa0.41□□□□□ -2.34
snR38snR38 CEP3P40969 608 aa0.41□□□□□ -2.34
snR38snR38 RPL34AP87262 121 aaPredicted RBP0.41□□□□□ -2.34
snR38snR38 RSC9Q03124 581 aa0.41□□□□□ -2.34
snR38snR38 USV1Q12132 391 aa0.41□□□□□ -2.34
snR38snR38 PHO5P00635 467 aa0.4□□□□□ -2.35
snR38snR38 TRL1P09880 827 aaKnown RBP0.4□□□□□ -2.35
snR38snR38 CDC12P32468 407 aaKnown RBP0.4□□□□□ -2.35
snR38snR38 YBR238CP38330 731 aaKnown RBP0.4□□□□□ -2.35
snR38snR38 JSN1P47135 1091 aaKnown RBP RIP-Chip data0.4□□□□□ -2.35not detected
snR38snR38 GNP1P48813 663 aa0.4□□□□□ -2.35
snR38snR38 PIP2P52960 996 aa0.4□□□□□ -2.35
snR38snR38 MUS81Q04149 632 aaPredicted RBP0.4□□□□□ -2.35
snR38snR38 TMA46Q12000 345 aaKnown RBP0.4□□□□□ -2.35
snR38snR38 FRE7Q12333 620 aa0.4□□□□□ -2.35
snR38snR38 AAD3P25612 363 aa0.39□□□□□ -2.35
snR38snR38 HSL7P38274 827 aa0.39□□□□□ -2.35
snR38snR38 SAK1P38990 1142 aa0.39□□□□□ -2.35
snR38snR38 NUP60P39705 539 aa0.39□□□□□ -2.35
snR38snR38 YIR016WP40572 265 aa0.39□□□□□ -2.35
snR38snR38 SAD1P43589 448 aa0.39□□□□□ -2.35
snR38snR38 YKE2P52553 114 aa0.39□□□□□ -2.35
snR38snR38 YEL076C-AP0CX16 216 aa0.38□□□□□ -2.35
snR38snR38 YLR464WP0CX17 216 aa0.38□□□□□ -2.35
snR38snR38 INO1P11986 533 aa0.38□□□□□ -2.35
snR38snR38 THR1P17423 357 aaKnown RBP0.38□□□□□ -2.35
snR38snR38 LYP1P32487 611 aa0.38□□□□□ -2.35
snR38snR38 FMO1P38866 432 aa0.38□□□□□ -2.35
snR38snR38 ECM1P39715 212 aa0.38□□□□□ -2.35
snR38snR38 YEL076CP39971 216 aa0.38□□□□□ -2.35
snR38snR38 MDJ2P42834 146 aa0.38□□□□□ -2.35
snR38snR38 PFA3P42836 336 aa0.38□□□□□ -2.35
snR38snR38 MDV1P47025 714 aa0.38□□□□□ -2.35
snR38snR38 LYS20P48570 428 aaKnown RBP0.38□□□□□ -2.35
snR38snR38 YGR151CP53287 111 aa0.38□□□□□ -2.35
snR38snR38 IMP4P53941 290 aaKnown RBP0.38□□□□□ -2.35
snR38snR38 IZH3Q07959 543 aa0.38□□□□□ -2.35
snR38snR38 ZRT2Q12436 422 aa0.38□□□□□ -2.35
snR38snR38 YMR230W-AQ3E7B5 62 aa0.38□□□□□ -2.35
snR38snR38 AIM44Q99299 758 aa0.38□□□□□ -2.35
snR38snR38 GCR1P07261 785 aa0.37□□□□□ -2.35
snR38snR38 HEM1P09950 548 aaPredicted RBP0.37□□□□□ -2.35
snR38snR38 PPZ1P26570 692 aa0.37□□□□□ -2.35
snR38snR38 SCT1P32784 759 aa0.37□□□□□ -2.35
snR38snR38 YEL1P34225 687 aa0.37□□□□□ -2.35
snR38snR38 APL3P38065 1025 aa0.37□□□□□ -2.35
snR38snR38 YEL068CP39977 110 aa0.37□□□□□ -2.35
snR38snR38 MIT1P40002 666 aa0.37□□□□□ -2.35
snR38snR38 YIL024CP40543 189 aa0.37□□□□□ -2.35
snR38snR38 PMT6P42934 759 aa0.37□□□□□ -2.35
snR38snR38 YBP2P53169 641 aa0.37□□□□□ -2.35
snR38snR38 YGR122WP53272 402 aa0.37□□□□□ -2.35
snR38snR38 TEX1P53851 422 aaKnown RBP0.37□□□□□ -2.35
snR38snR38 NGL2Q03264 515 aaKnown RBP0.37□□□□□ -2.35
snR38snR38 ARG7Q04728 441 aa0.37□□□□□ -2.35
snR38snR38 TOS4Q06266 489 aa0.37□□□□□ -2.35
snR38snR38 RSC3Q06639 885 aa0.37□□□□□ -2.35
snR38snR38 RTT10Q08924 1013 aa0.37□□□□□ -2.35
snR38snR38 UBX3Q12229 455 aa0.37□□□□□ -2.35
snR38snR38 CYB2P00175 591 aa0.36□□□□□ -2.35
snR38snR38 LDB16P25587 256 aa0.36□□□□□ -2.35
snR38snR38 URA1P28272 314 aaPredicted RBP0.36□□□□□ -2.35
snR38snR38 CDC3P32457 520 aaKnown RBP0.36□□□□□ -2.35
snR38snR38 SET3P36124 751 aa0.36□□□□□ -2.35
snR38snR38 APT2P36973 181 aa0.36□□□□□ -2.35
snR38snR38 KSP1P38691 1029 aaKnown RBP0.36□□□□□ -2.35
snR38snR38 CFD1P40558 293 aa0.36□□□□□ -2.35
snR38snR38 KRI1P42846 591 aaKnown RBP0.36□□□□□ -2.35
snR38snR38 SSY5P47002 699 aa0.36□□□□□ -2.35
snR38snR38 DUS3Q06053 668 aaKnown RBP0.36□□□□□ -2.35
snR38snR38 DSE3Q08729 430 aa0.36□□□□□ -2.35
snR38snR38 TRP2P00899 507 aaKnown RBP0.35□□□□□ -2.35
snR38snR38 ADE8P04161 214 aa0.35□□□□□ -2.35
snR38snR38 RAD2P07276 1031 aa0.35□□□□□ -2.35
snR38snR38 RPL42AP0CX27 106 aaKnown RBP0.35□□□□□ -2.35
snR38snR38 RPL42BP0CX28 106 aaKnown RBP0.35□□□□□ -2.35
snR38snR38 YCP4P25349 247 aaKnown RBP0.35□□□□□ -2.35
snR38snR38 PPH3P32345 308 aa0.35□□□□□ -2.35
snR38snR38 RPC34P32910 317 aa0.35□□□□□ -2.35
snR38snR38 RPT1P33299 467 aaKnown RBP0.35□□□□□ -2.35
snR38snR38 MOT2P34909 587 aaKnown RBP0.35□□□□□ -2.35
snR38snR38 CCM1P48237 864 aaPredicted RBP0.35□□□□□ -2.35
snR38snR38 HDA1P53973 706 aa0.35□□□□□ -2.35
snR38snR38 SPO20Q04359 397 aa0.35□□□□□ -2.35
snR38snR38 YPL066WQ12194 479 aa0.35□□□□□ -2.35
snR38snR38 LAM4P38800 1345 aa0.35□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 39.4 ms