RNA–Protein interactions for RNA: YPR094W

RDS3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene RDS3, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDS3YPR094W THR1P17423 357 aaKnown RBP0.81□□□□□ -2.28
RDS3YPR094W YCL002CP25565 263 aa0.81□□□□□ -2.28
RDS3YPR094W MVD1P32377 396 aaKnown RBP0.81□□□□□ -2.28
RDS3YPR094W UGP1P32861 499 aaKnown RBP0.81□□□□□ -2.28
RDS3YPR094W REC104P33323 182 aa0.81□□□□□ -2.28
RDS3YPR094W HOT13P36078 116 aa0.81□□□□□ -2.28
RDS3YPR094W GMH1P36125 273 aa0.81□□□□□ -2.28
RDS3YPR094W PXL1P36166 706 aa0.81□□□□□ -2.28
RDS3YPR094W PMC1P38929 1173 aaPredicted RBP0.81□□□□□ -2.28
RDS3YPR094W CCM1P48237 864 aaPredicted RBP0.81□□□□□ -2.28
RDS3YPR094W RMD1Q03441 430 aa0.81□□□□□ -2.28
RDS3YPR094W GAD1Q04792 585 aa0.81□□□□□ -2.28
RDS3YPR094W USV1Q12132 391 aa0.81□□□□□ -2.28
RDS3YPR094W FRE7Q12333 620 aa0.81□□□□□ -2.28
RDS3YPR094W PHO5P00635 467 aa0.8□□□□□ -2.28
RDS3YPR094W DAL7P21826 554 aa0.8□□□□□ -2.28
RDS3YPR094W ERG6P25087 383 aaKnown RBP0.8□□□□□ -2.28
RDS3YPR094W GCS1P35197 352 aa0.8□□□□□ -2.28
RDS3YPR094W YKL069WP36088 180 aa0.8□□□□□ -2.28
RDS3YPR094W YBR259WP38338 688 aa0.8□□□□□ -2.28
RDS3YPR094W NUP60P39705 539 aa0.8□□□□□ -2.28
RDS3YPR094W JSN1P47135 1091 aaKnown RBP RIP-Chip data0.8□□□□□ -2.28not detected
RDS3YPR094W ASN1P49089 572 aaKnown RBP0.8□□□□□ -2.28
RDS3YPR094W SCW4P53334 386 aaKnown RBP0.8□□□□□ -2.28
RDS3YPR094W GDE1Q02979 1223 aa0.8□□□□□ -2.28
RDS3YPR094W LRS4Q04087 347 aaKnown RBP0.8□□□□□ -2.28
RDS3YPR094W LCD1Q04377 747 aa0.8□□□□□ -2.28
RDS3YPR094W RSC3Q06639 885 aa0.8□□□□□ -2.28
RDS3YPR094W ENV7Q12003 364 aa0.8□□□□□ -2.28
RDS3YPR094W ULA1Q12059 462 aa0.8□□□□□ -2.28
RDS3YPR094W PRC1P00729 532 aa0.79□□□□□ -2.28
RDS3YPR094W TOP3P13099 656 aa0.79□□□□□ -2.28
RDS3YPR094W HBS1P32769 611 aaKnown RBP0.79□□□□□ -2.28
RDS3YPR094W YHR112CP38716 378 aa0.79□□□□□ -2.28
RDS3YPR094W MET30P39014 640 aa0.79□□□□□ -2.28
RDS3YPR094W MTR3P48240 250 aaPredicted RBP0.79□□□□□ -2.28
RDS3YPR094W PIP2P52960 996 aa0.79□□□□□ -2.28
RDS3YPR094W SPC98P53540 846 aa0.79□□□□□ -2.28
RDS3YPR094W NOG2P53742 486 aaKnown RBP0.79□□□□□ -2.28
RDS3YPR094W SHE9Q04172 456 aa0.79□□□□□ -2.28
RDS3YPR094W SCW10Q04951 389 aa0.79□□□□□ -2.28
RDS3YPR094W THI21Q08975 551 aa0.79□□□□□ -2.28
RDS3YPR094W FAL1Q12099 399 aaKnown RBP0.79□□□□□ -2.28
RDS3YPR094W YPR071WQ12346 211 aa0.79□□□□□ -2.28
RDS3YPR094W ZRT2Q12436 422 aa0.79□□□□□ -2.28
RDS3YPR094W HRP1Q99383 534 aaKnown RBP0.79□□□□□ -2.28
RDS3YPR094W ADE2P21264 571 aaKnown RBP0.78□□□□□ -2.28
RDS3YPR094W KCC4P25389 1037 aa0.78□□□□□ -2.28
RDS3YPR094W EUG1P32474 517 aa0.78□□□□□ -2.28
RDS3YPR094W MNR2P35724 969 aa0.78□□□□□ -2.28
RDS3YPR094W YBR284WP38150 797 aa0.78□□□□□ -2.28
RDS3YPR094W KSP1P38691 1029 aaKnown RBP0.78□□□□□ -2.28
RDS3YPR094W ECM1P39715 212 aa0.78□□□□□ -2.28
RDS3YPR094W PRP31P49704 494 aaPredicted RBP0.78□□□□□ -2.28
RDS3YPR094W TAD1P53065 400 aa0.78□□□□□ -2.28
RDS3YPR094W YGR151CP53287 111 aa0.78□□□□□ -2.28
RDS3YPR094W LSC1P53598 329 aaKnown RBP0.78□□□□□ -2.28
RDS3YPR094W OYE2Q03558 400 aaKnown RBP0.78□□□□□ -2.28
RDS3YPR094W CTK1Q03957 528 aaKnown RBP0.78□□□□□ -2.28
RDS3YPR094W ARG7Q04728 441 aa0.78□□□□□ -2.28
RDS3YPR094W YTH1Q06102 208 aaPredicted RBP0.78□□□□□ -2.28
RDS3YPR094W NDD1Q08887 554 aa0.78□□□□□ -2.28
RDS3YPR094W PRS5Q12265 496 aaKnown RBP0.78□□□□□ -2.28
RDS3YPR094W AI5_ALPHAQ9ZZX1 630 aa0.78□□□□□ -2.28
RDS3YPR094W PRI2P20457 528 aa0.77□□□□□ -2.29
RDS3YPR094W AAD3P25612 363 aa0.77□□□□□ -2.29
RDS3YPR094W BEM3P32873 1128 aa0.77□□□□□ -2.29
RDS3YPR094W STE5P32917 917 aa0.77□□□□□ -2.29
RDS3YPR094W SLD2P34252 453 aa0.77□□□□□ -2.29
RDS3YPR094W ASK1P35734 292 aa0.77□□□□□ -2.29
RDS3YPR094W SAP190P36123 1033 aa0.77□□□□□ -2.29
RDS3YPR094W TRZ1P36159 838 aaPredicted RBP0.77□□□□□ -2.29
RDS3YPR094W SDS24P38314 527 aa0.77□□□□□ -2.29
RDS3YPR094W YHR097CP38809 366 aaKnown RBP0.77□□□□□ -2.29
RDS3YPR094W CRP1P38845 465 aaKnown RBP0.77□□□□□ -2.29
RDS3YPR094W GET2P40056 285 aa0.77□□□□□ -2.29
RDS3YPR094W NMA2P53204 395 aa0.77□□□□□ -2.29
RDS3YPR094W OPI10Q08202 246 aa0.77□□□□□ -2.29
RDS3YPR094W LAM4P38800 1345 aa0.77□□□□□ -2.29
RDS3YPR094W TPK2P06245 380 aa0.76□□□□□ -2.29
RDS3YPR094W MSD1P15179 658 aaKnown RBP0.76□□□□□ -2.29
RDS3YPR094W YOX1P34161 385 aa0.76□□□□□ -2.29
RDS3YPR094W APL2P36000 726 aaPredicted RBP0.76□□□□□ -2.29
RDS3YPR094W PBY1P38254 753 aa0.76□□□□□ -2.29
RDS3YPR094W YAT2P40017 923 aa0.76□□□□□ -2.29
RDS3YPR094W PCI8P40512 444 aa0.76□□□□□ -2.29
RDS3YPR094W KRI1P42846 591 aaKnown RBP0.76□□□□□ -2.29
RDS3YPR094W NMD5P46970 1048 aa0.76□□□□□ -2.29
RDS3YPR094W ZIP2P53061 704 aa0.76□□□□□ -2.29
RDS3YPR094W ATP23P53722 227 aa0.76□□□□□ -2.29
RDS3YPR094W ARG5,6Q01217 863 aa0.76□□□□□ -2.29
RDS3YPR094W RSC9Q03124 581 aa0.76□□□□□ -2.29
RDS3YPR094W ORM2Q06144 216 aa0.76□□□□□ -2.29
RDS3YPR094W YDL086WQ07505 273 aa0.76□□□□□ -2.29
RDS3YPR094W YBR182C-AQ8TGU6 64 aa0.76□□□□□ -2.29
RDS3YPR094W LEU2P04173 364 aaPredicted RBP0.75□□□□□ -2.29
RDS3YPR094W TUP1P16649 713 aa0.75□□□□□ -2.29
RDS3YPR094W RNR1P21524 888 aaKnown RBP0.75□□□□□ -2.29
RDS3YPR094W BCS1P32839 456 aa0.75□□□□□ -2.29
RDS3YPR094W YEL1P34225 687 aa0.75□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 97.8 ms