RNA–Protein interactions for RNA: YPL160W

CDC60, Transcript of Cytosolic leucyl tRNA synthetase, yeastyeast

Gene CDC60, Length 3,273 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC60YPL160W YVH1Q02256 364 aaKnown RBP2.31□□□□□ -2.04
CDC60YPL160W SKY1Q03656 742 aa2.31□□□□□ -2.04
CDC60YPL160W PEX15Q08215 383 aa2.31□□□□□ -2.04
CDC60YPL160W PTC5Q12511 572 aa2.31□□□□□ -2.04
CDC60YPL160W PGA3Q12746 312 aaKnown RBP2.31□□□□□ -2.04
CDC60YPL160W TY4B-PA0A0B7P3V8 1104 aa2.31□□□□□ -2.04
CDC60YPL160W SEC18P18759 758 aaKnown RBP2.31□□□□□ -2.04
CDC60YPL160W OPI1P21957 404 aa2.31□□□□□ -2.04
CDC60YPL160W SAN1P22470 610 aa2.31□□□□□ -2.04
CDC60YPL160W URA1P28272 314 aaPredicted RBP2.31□□□□□ -2.04
CDC60YPL160W PET309P32522 965 aaPredicted RBP2.31□□□□□ -2.04
CDC60YPL160W MUD2P36084 527 aaKnown RBP2.31□□□□□ -2.04
CDC60YPL160W DID4P36108 232 aa2.31□□□□□ -2.04
CDC60YPL160W YRO2P38079 344 aa2.31□□□□□ -2.04
CDC60YPL160W NCL1P38205 684 aaKnown RBP2.31□□□□□ -2.04
CDC60YPL160W UBP15P50101 1230 aa2.31□□□□□ -2.04
CDC60YPL160W UBC9P50623 157 aaPredicted RBP2.31□□□□□ -2.04
CDC60YPL160W RSC1P53236 928 aa2.31□□□□□ -2.04
CDC60YPL160W ARP4P80428 489 aa2.31□□□□□ -2.04
CDC60YPL160W MEC3Q02574 474 aa2.31□□□□□ -2.04
CDC60YPL160W YKU80Q04437 629 aa2.31□□□□□ -2.04
CDC60YPL160W TY4A-HQ6Q5P6 413 aa2.31□□□□□ -2.04
CDC60YPL160W YBR182C-AQ8TGU6 64 aa2.31□□□□□ -2.04
CDC60YPL160W NCP1P16603 691 aaKnown RBP2.3□□□□□ -2.04
CDC60YPL160W YCL002CP25565 263 aa2.3□□□□□ -2.04
CDC60YPL160W CHS3P29465 1165 aa2.3□□□□□ -2.04
CDC60YPL160W RRN3P36070 627 aa2.3□□□□□ -2.04
CDC60YPL160W HOL1P53389 586 aa2.3□□□□□ -2.04
CDC60YPL160W PAP2P53632 584 aaKnown RBP2.3□□□□□ -2.04
CDC60YPL160W YNR063WP53749 607 aa2.3□□□□□ -2.04
CDC60YPL160W PSK2Q08217 1101 aa2.3□□□□□ -2.04
CDC60YPL160W DPH6Q12429 685 aa2.3□□□□□ -2.04
CDC60YPL160W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
CDC60YPL160W ENT1Q12518 454 aa2.3□□□□□ -2.04
CDC60YPL160W TY1B-DR3Q99231 1755 aa2.3□□□□□ -2.04
CDC60YPL160W GFD2P25370 566 aaKnown RBP2.3□□□□□ -2.04
CDC60YPL160W KIP1P28742 1111 aa2.3□□□□□ -2.04
CDC60YPL160W RPS0AP32905 252 aaKnown RBP2.3□□□□□ -2.04
CDC60YPL160W DHR2P36009 735 aaPredicted RBP2.3□□□□□ -2.04
CDC60YPL160W PGM2P37012 569 aaKnown RBP2.3□□□□□ -2.04
CDC60YPL160W DPH1P40487 425 aaKnown RBP2.3□□□□□ -2.04
CDC60YPL160W YGR153WP48238 217 aa2.3□□□□□ -2.04
CDC60YPL160W CWC22P53333 577 aaKnown RBP2.3□□□□□ -2.04
CDC60YPL160W LRS4Q04087 347 aaKnown RBP2.3□□□□□ -2.04
CDC60YPL160W NHX1Q04121 633 aa2.3□□□□□ -2.04
CDC60YPL160W OMS1Q06668 471 aa2.3□□□□□ -2.04
CDC60YPL160W GCN2P15442 1659 aa2.3□□□□□ -2.04
CDC60YPL160W INH1P01097 85 aa2.3□□□□□ -2.04
CDC60YPL160W RPS9BP05755 195 aaKnown RBP2.3□□□□□ -2.04
CDC60YPL160W PFK1P16861 987 aaKnown RBP2.3□□□□□ -2.04
CDC60YPL160W YKU70P32807 602 aa2.3□□□□□ -2.04
CDC60YPL160W NOP4P37838 685 aaKnown RBP2.3□□□□□ -2.04
CDC60YPL160W BCD1P38772 366 aa2.3□□□□□ -2.04
CDC60YPL160W GIC1P38785 314 aa2.3□□□□□ -2.04
CDC60YPL160W EAF5P39995 279 aa2.3□□□□□ -2.04
CDC60YPL160W TPA1P40032 644 aaKnown RBP2.3□□□□□ -2.04
CDC60YPL160W TAF11Q04226 346 aa2.3□□□□□ -2.04
CDC60YPL160W OPY2Q06810 360 aa2.3□□□□□ -2.04
CDC60YPL160W SYT1Q06836 1226 aa2.3□□□□□ -2.04
CDC60YPL160W ADE8P04161 214 aa2.29□□□□□ -2.04
CDC60YPL160W SPO16P17122 198 aa2.29□□□□□ -2.04
CDC60YPL160W SNF5P18480 905 aa2.29□□□□□ -2.04
CDC60YPL160W PPH3P32345 308 aa2.29□□□□□ -2.04
CDC60YPL160W BLI1P35727 113 aa2.29□□□□□ -2.04
CDC60YPL160W YKR051WP36142 418 aa2.29□□□□□ -2.04
CDC60YPL160W QNS1P38795 714 aaKnown RBP2.29□□□□□ -2.04
CDC60YPL160W AXL2P38928 823 aa2.29□□□□□ -2.04
CDC60YPL160W PES4P39684 611 aa2.29□□□□□ -2.04
CDC60YPL160W IRC5P43610 853 aa2.29□□□□□ -2.04
CDC60YPL160W GCV1P48015 400 aa2.29□□□□□ -2.04
CDC60YPL160W GYP7P48365 746 aa2.29□□□□□ -2.04
CDC60YPL160W SLD3P53135 668 aa2.29□□□□□ -2.04
CDC60YPL160W YGR045CP53229 120 aa2.29□□□□□ -2.04
CDC60YPL160W CPR6P53691 371 aaKnown RBP2.29□□□□□ -2.04
CDC60YPL160W SSL2Q00578 843 aa2.29□□□□□ -2.04
CDC60YPL160W RSC2Q06488 889 aa2.29□□□□□ -2.04
CDC60YPL160W IRC3Q06683 689 aa2.29□□□□□ -2.04
CDC60YPL160W RSC58Q07979 502 aa2.29□□□□□ -2.04
CDC60YPL160W RCL1Q08096 367 aaPredicted RBP2.29□□□□□ -2.04
CDC60YPL160W NUP188P52593 1655 aaKnown RBP2.29□□□□□ -2.04
CDC60YPL160W YPR117WQ06116 2489 aa2.29□□□□□ -2.04
CDC60YPL160W SNF1P06782 633 aaKnown RBP2.29□□□□□ -2.04
CDC60YPL160W AAC3P18238 307 aa2.29□□□□□ -2.04
CDC60YPL160W CYS3P31373 394 aaKnown RBP2.29□□□□□ -2.04
CDC60YPL160W STE13P33894 931 aa2.29□□□□□ -2.04
CDC60YPL160W NUP120P35729 1037 aa2.29□□□□□ -2.04
CDC60YPL160W GPB2P39717 880 aa2.29□□□□□ -2.04
CDC60YPL160W SGM1P47166 707 aa2.29□□□□□ -2.04
CDC60YPL160W GUP1P53154 560 aa2.29□□□□□ -2.04
CDC60YPL160W DAM1P53267 343 aa2.29□□□□□ -2.04
CDC60YPL160W LEE1Q02799 301 aaKnown RBP2.29□□□□□ -2.04
CDC60YPL160W GRC3Q07845 632 aa2.29□□□□□ -2.04
CDC60YPL160W RLP24Q07915 199 aaKnown RBP2.29□□□□□ -2.04
CDC60YPL160W ALG6Q12001 544 aaKnown RBP2.29□□□□□ -2.04
CDC60YPL160W TRM8Q12009 286 aa2.29□□□□□ -2.04
CDC60YPL160W YPR027CQ12079 277 aa2.29□□□□□ -2.04
CDC60YPL160W RVB2Q12464 471 aaKnown RBP2.29□□□□□ -2.04
CDC60YPL160W Q0142Q9ZZW4 58 aa2.29□□□□□ -2.04
CDC60YPL160W SNQ2P32568 1501 aaKnown RBP2.29□□□□□ -2.04
CDC60YPL160W SWI6P09959 803 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms