RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W YBR053CP38235 358 aa6.23□□□□□ -1.41
VPS28YPL065W SAK1P38990 1142 aa6.23□□□□□ -1.41
VPS28YPL065W YIR042CP40586 236 aa6.23□□□□□ -1.41
VPS28YPL065W TAD1P53065 400 aa6.23□□□□□ -1.41
VPS28YPL065W RIA1P53893 1110 aa6.23□□□□□ -1.41
VPS28YPL065W YLR415CO13578 112 aa6.22□□□□□ -1.41
VPS28YPL065W MTC2P34246 357 aa6.22□□□□□ -1.41
VPS28YPL065W YNR029CP53729 429 aaKnown RBP6.22□□□□□ -1.41
VPS28YPL065W YDR514CQ04408 483 aa6.22□□□□□ -1.41
VPS28YPL065W YLR001CQ07895 862 aa6.22□□□□□ -1.41
VPS28YPL065W SRD1P09007 221 aa6.21□□□□□ -1.42
VPS28YPL065W RAD18P10862 487 aa6.21□□□□□ -1.42
VPS28YPL065W CDC43P18898 376 aa6.21□□□□□ -1.42
VPS28YPL065W SET5P38890 526 aaKnown RBP6.21□□□□□ -1.42
VPS28YPL065W IOC4Q04213 475 aa6.21□□□□□ -1.42
VPS28YPL065W MRH1Q12117 320 aaPredicted RBP6.21□□□□□ -1.42
VPS28YPL065W LAT1P12695 482 aaKnown RBP6.2□□□□□ -1.42
VPS28YPL065W GFA1P14742 717 aaKnown RBP6.2□□□□□ -1.42
VPS28YPL065W YCL002CP25565 263 aa6.2□□□□□ -1.42
VPS28YPL065W GRX4P32642 244 aa6.2□□□□□ -1.42
VPS28YPL065W UBP12P39538 1254 aa6.2□□□□□ -1.42
VPS28YPL065W PFA3P42836 336 aa6.2□□□□□ -1.42
VPS28YPL065W HLJ1P48353 224 aa6.2□□□□□ -1.42
VPS28YPL065W LRS4Q04087 347 aaKnown RBP6.2□□□□□ -1.42
VPS28YPL065W THI21Q08975 551 aa6.19□□□□□ -1.42
VPS28YPL065W ATG11Q12527 1178 aa6.19□□□□□ -1.42
VPS28YPL065W STO1P34160 861 aaKnown RBP6.18□□□□□ -1.42
VPS28YPL065W MCD4P36051 919 aa6.18□□□□□ -1.42
VPS28YPL065W PCL5P38794 229 aa6.18□□□□□ -1.42
VPS28YPL065W YEN1P40028 759 aa6.18□□□□□ -1.42
VPS28YPL065W CAF16P43569 289 aa6.18□□□□□ -1.42
VPS28YPL065W MSL5Q12186 476 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42not detected
VPS28YPL065W HCA4P20448 770 aaKnown RBP6.17□□□□□ -1.42
VPS28YPL065W PCL2P25693 308 aa6.17□□□□□ -1.42
VPS28YPL065W SIC1P38634 284 aa6.17□□□□□ -1.42
VPS28YPL065W SHR5P41912 237 aa6.17□□□□□ -1.42
VPS28YPL065W HXT16P47185 567 aa6.17□□□□□ -1.42
VPS28YPL065W MTR3P48240 250 aaPredicted RBP6.17□□□□□ -1.42
VPS28YPL065W YGL081WP53156 320 aa6.17□□□□□ -1.42
VPS28YPL065W SDA1P53313 767 aaKnown RBP6.17□□□□□ -1.42
VPS28YPL065W SGO1Q08490 590 aa6.17□□□□□ -1.42
VPS28YPL065W YBR259WP38338 688 aa6.16□□□□□ -1.42
VPS28YPL065W MET13P53128 600 aa6.16□□□□□ -1.42
VPS28YPL065W LGE1Q02796 332 aaKnown RBP6.16□□□□□ -1.42
VPS28YPL065W THI73Q07904 523 aa6.16□□□□□ -1.42
VPS28YPL065W NDJ1Q12366 352 aa6.16□□□□□ -1.42
VPS28YPL065W SFL1P20134 766 aa6.15□□□□□ -1.42
VPS28YPL065W FMP52P40008 231 aa6.15□□□□□ -1.42
VPS28YPL065W ALY2P47029 1046 aa6.15□□□□□ -1.42
VPS28YPL065W SSL2Q00578 843 aa6.15□□□□□ -1.42
VPS28YPL065W IRC13Q08630 104 aa6.15□□□□□ -1.42
VPS28YPL065W DIF1O13577 133 aa6.14□□□□□ -1.43
VPS28YPL065W KIN3P22209 435 aa6.14□□□□□ -1.43
VPS28YPL065W SSD1P24276 1250 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
VPS28YPL065W HIS7P33734 552 aaKnown RBP6.14□□□□□ -1.43
VPS28YPL065W RLP7P40693 322 aaKnown RBP6.14□□□□□ -1.43
VPS28YPL065W SNP1Q00916 300 aaPredicted RBP6.14□□□□□ -1.43
VPS28YPL065W TGL5Q12043 749 aa6.14□□□□□ -1.43
VPS28YPL065W YBR182C-AQ8TGU6 64 aa6.14□□□□□ -1.43
VPS28YPL065W TDP1P38319 544 aa6.13□□□□□ -1.43
VPS28YPL065W MGS1P40151 587 aa6.13□□□□□ -1.43
VPS28YPL065W TEL2P53038 688 aa6.13□□□□□ -1.43
VPS28YPL065W ZIP2P53061 704 aa6.13□□□□□ -1.43
VPS28YPL065W AIM14P53109 570 aa6.13□□□□□ -1.43
VPS28YPL065W YBP2P53169 641 aa6.13□□□□□ -1.43
VPS28YPL065W HOG1P32485 435 aa6.12□□□□□ -1.43
VPS28YPL065W YEL1P34225 687 aa6.12□□□□□ -1.43
VPS28YPL065W PCM1P38628 557 aaKnown RBP6.12□□□□□ -1.43
VPS28YPL065W BCD1P38772 366 aa6.12□□□□□ -1.43
VPS28YPL065W PMT3P47190 753 aa6.12□□□□□ -1.43
VPS28YPL065W NUP145P49687 1317 aa6.12□□□□□ -1.43
VPS28YPL065W YGR237CP50089 785 aa6.12□□□□□ -1.43
VPS28YPL065W VPS73P53142 486 aaKnown RBP6.12□□□□□ -1.43
VPS28YPL065W YAP1802P53309 568 aa6.12□□□□□ -1.43
VPS28YPL065W UME1Q03010 460 aa6.12□□□□□ -1.43
VPS28YPL065W YDR338CQ05497 695 aa6.12□□□□□ -1.43
VPS28YPL065W MIH1P23748 554 aa6.11□□□□□ -1.43
VPS28YPL065W DMC1P25453 334 aa6.11□□□□□ -1.43
VPS28YPL065W ILV6P25605 309 aaKnown RBP6.11□□□□□ -1.43
VPS28YPL065W TYS1P36421 394 aaKnown RBP6.11□□□□□ -1.43
VPS28YPL065W CBR1P38626 284 aaKnown RBP6.11□□□□□ -1.43
VPS28YPL065W RPN10P38886 268 aaKnown RBP6.11□□□□□ -1.43
VPS28YPL065W ECM1P39715 212 aa6.11□□□□□ -1.43
VPS28YPL065W GPG1P53130 126 aa6.11□□□□□ -1.43
VPS28YPL065W GAD1Q04792 585 aa6.11□□□□□ -1.43
VPS28YPL065W ATG33Q06485 197 aa6.11□□□□□ -1.43
VPS28YPL065W SSB1P11484 613 aaKnown RBP6.1□□□□□ -1.43
VPS28YPL065W HMG1P12683 1054 aa6.1□□□□□ -1.43
VPS28YPL065W PPZ2P33329 710 aa6.1□□□□□ -1.43
VPS28YPL065W REV7P38927 245 aa6.1□□□□□ -1.43
VPS28YPL065W SSB2P40150 613 aaKnown RBP6.1□□□□□ -1.43
VPS28YPL065W HOS4P40480 1083 aa6.1□□□□□ -1.43
VPS28YPL065W UBC11P52492 156 aa6.1□□□□□ -1.43
VPS28YPL065W NHX1Q04121 633 aa6.1□□□□□ -1.43
VPS28YPL065W GIN4Q12263 1142 aa6.1□□□□□ -1.43
VPS28YPL065W GPR1Q12361 961 aa6.1□□□□□ -1.43
VPS28YPL065W YIL166CP40445 542 aa6.09□□□□□ -1.43
VPS28YPL065W TAH11P47112 604 aa6.09□□□□□ -1.43
VPS28YPL065W UBC9P50623 157 aaPredicted RBP6.09□□□□□ -1.43
VPS28YPL065W GUD1Q07729 489 aa6.09□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 60.5 ms