RNA–Protein interactions for RNA: YPL006W

NCR1, Transcript of Vacuolar membrane protein, yeast

Gene NCR1, Length 3,513 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCR1	YPL006W	SPO16	P17122	198 aa		4.17	□□□□□ -1.74
NCR1	YPL006W	DAL2	P25335	343 aa		4.17	□□□□□ -1.74
NCR1	YPL006W	RPC37	P36121	282 aa		4.17	□□□□□ -1.74
NCR1	YPL006W	STV1	P37296	890 aa		4.17	□□□□□ -1.74
NCR1	YPL006W	YBL086C	P38177	466 aa		4.17	□□□□□ -1.74
NCR1	YPL006W	FZO1	P38297	855 aa		4.17	□□□□□ -1.74
NCR1	YPL006W	YMR134W	P40207	237 aa		4.17	□□□□□ -1.74
NCR1	YPL006W	PUS2	P53167	370 aa		4.17	□□□□□ -1.74
NCR1	YPL006W	YGL039W	P53183	348 aa	Known RBP	4.17	□□□□□ -1.74
NCR1	YPL006W	UFO1	Q04511	668 aa		4.17	□□□□□ -1.74
NCR1	YPL006W	EST1	P17214	699 aa	Predicted RBP	4.16	□□□□□ -1.74
NCR1	YPL006W	CDC42	P19073	191 aa		4.16	□□□□□ -1.74
NCR1	YPL006W	SPT5	P27692	1063 aa	Known RBP	4.16	□□□□□ -1.74
NCR1	YPL006W	PEX2	P32800	271 aa		4.16	□□□□□ -1.74
NCR1	YPL006W	PAM1	P37304	830 aa	Known RBP	4.16	□□□□□ -1.74
NCR1	YPL006W	RSM26	P47141	266 aa		4.16	□□□□□ -1.74
NCR1	YPL006W	RGA2	Q06407	1009 aa		4.16	□□□□□ -1.74
NCR1	YPL006W	ABP140	Q08641	628 aa	Known RBP	4.16	□□□□□ -1.74
NCR1	YPL006W	TY4A-H	Q6Q5P6	413 aa		4.16	□□□□□ -1.74
NCR1	YPL006W	BI2	P03873	423 aa		4.16	□□□□□ -1.74
NCR1	YPL006W	BI4	P03879	638 aa		4.16	□□□□□ -1.74
NCR1	YPL006W	RNR1	P21524	888 aa	Known RBP	4.16	□□□□□ -1.74
NCR1	YPL006W	BUD14	P27637	709 aa		4.16	□□□□□ -1.74
NCR1	YPL006W	KIP2	P28743	706 aa		4.16	□□□□□ -1.74
NCR1	YPL006W	MUD1	P32605	298 aa	Known RBP	4.16	□□□□□ -1.74
NCR1	YPL006W	TGL1	P34163	548 aa		4.16	□□□□□ -1.74
NCR1	YPL006W	PMC1	P38929	1173 aa	Predicted RBP	4.16	□□□□□ -1.74
NCR1	YPL006W	OAF1	P39720	1047 aa	Predicted RBP	4.16	□□□□□ -1.74
NCR1	YPL006W	ALA1	P40825	983 aa	Known RBP	4.16	□□□□□ -1.74
NCR1	YPL006W	RRD2	Q12461	358 aa		4.16	□□□□□ -1.74
NCR1	YPL006W	BI3	Q9ZZW7	517 aa		4.16	□□□□□ -1.74
NCR1	YPL006W	RAD18	P10862	487 aa		4.16	□□□□□ -1.74
NCR1	YPL006W	MRPS28	P21771	286 aa		4.16	□□□□□ -1.74
NCR1	YPL006W	AEP2	P22136	580 aa		4.16	□□□□□ -1.74
NCR1	YPL006W	YME2	P32843	850 aa		4.16	□□□□□ -1.74
NCR1	YPL006W	CSG2	P35206	410 aa		4.16	□□□□□ -1.74
NCR1	YPL006W	SPC97	P38863	823 aa		4.16	□□□□□ -1.74
NCR1	YPL006W	PFK26	P40433	827 aa	Known RBP	4.16	□□□□□ -1.74
NCR1	YPL006W	YIL001W	P40560	513 aa		4.16	□□□□□ -1.74
NCR1	YPL006W	SEC26	P41810	973 aa	Known RBP	4.16	□□□□□ -1.74
NCR1	YPL006W	TFG1	P41895	735 aa	Predicted RBP	4.16	□□□□□ -1.74
NCR1	YPL006W	NNF2	P53253	936 aa		4.16	□□□□□ -1.74
NCR1	YPL006W	YMR027W	Q04371	470 aa		4.16	□□□□□ -1.74
NCR1	YPL006W	NCR1	Q12200	1170 aa		4.16	□□□□□ -1.74
NCR1	YPL006W	RPS3	P05750	240 aa	Known RBP	4.15	□□□□□ -1.74
NCR1	YPL006W	EFB1	P32471	206 aa	Known RBP	4.15	□□□□□ -1.74
NCR1	YPL006W	DUG2	P38149	878 aa		4.15	□□□□□ -1.74
NCR1	YPL006W	SIP5	P40210	489 aa	Known RBP	4.15	□□□□□ -1.74
NCR1	YPL006W	YJL045W	P47052	634 aa		4.15	□□□□□ -1.74
NCR1	YPL006W	CPR7	P47103	393 aa		4.15	□□□□□ -1.74
NCR1	YPL006W	EAF6	P47128	113 aa		4.15	□□□□□ -1.74
NCR1	YPL006W	PTA1	Q01329	785 aa	Predicted RBP	4.15	□□□□□ -1.74
NCR1	YPL006W	DBP5	P20449	482 aa	Known RBP	4.15	□□□□□ -1.75
NCR1	YPL006W	VMA4	P22203	233 aa	Known RBP	4.15	□□□□□ -1.75
NCR1	YPL006W	RFC3	P38629	340 aa		4.15	□□□□□ -1.75
NCR1	YPL006W	ERP5	P38819	212 aa		4.15	□□□□□ -1.75
NCR1	YPL006W	UBP6	P43593	499 aa	Known RBP	4.15	□□□□□ -1.75
NCR1	YPL006W	TAF6	P53040	516 aa		4.15	□□□□□ -1.75
NCR1	YPL006W	ERP6	P53198	216 aa		4.15	□□□□□ -1.75
NCR1	YPL006W	ERV41	Q04651	352 aa		4.15	□□□□□ -1.75
NCR1	YPL006W	GUD1	Q07729	489 aa		4.15	□□□□□ -1.75
NCR1	YPL006W	YPT6	Q99260	215 aa		4.15	□□□□□ -1.75
NCR1	YPL006W	CMD1	P06787	147 aa	Known RBP	4.15	□□□□□ -1.75
NCR1	YPL006W	ERG12	P07277	443 aa		4.15	□□□□□ -1.75
NCR1	YPL006W	TUB3	P09734	445 aa	Known RBP	4.15	□□□□□ -1.75
NCR1	YPL006W	GCD2	P12754	651 aa	Predicted RBP	4.15	□□□□□ -1.75
NCR1	YPL006W	MCM5	P29496	775 aa	Known RBP	4.15	□□□□□ -1.75
NCR1	YPL006W	TMT1	P32643	299 aa		4.15	□□□□□ -1.75
NCR1	YPL006W	YBP1	P38315	674 aa		4.15	□□□□□ -1.75
NCR1	YPL006W	AVT1	P47082	602 aa		4.15	□□□□□ -1.75
NCR1	YPL006W	NOG2	P53742	486 aa	Known RBP	4.15	□□□□□ -1.75
NCR1	YPL006W	RPA49	Q01080	415 aa	Predicted RBP	4.15	□□□□□ -1.75
NCR1	YPL006W	CRD1	Q07560	283 aa		4.15	□□□□□ -1.75
NCR1	YPL006W	FAP7	Q12055	197 aa	Predicted RBP	4.15	□□□□□ -1.75
NCR1	YPL006W	KEX2	P13134	814 aa		4.14	□□□□□ -1.75
NCR1	YPL006W	PMS1	P14242	873 aa		4.14	□□□□□ -1.75
NCR1	YPL006W	MRPL25	P23369	157 aa		4.14	□□□□□ -1.75
NCR1	YPL006W	CCL1	P37366	393 aa		4.14	□□□□□ -1.75
NCR1	YPL006W	MRX3	P38172	270 aa		4.14	□□□□□ -1.75
NCR1	YPL006W	POP4	P38336	279 aa		4.14	□□□□□ -1.75
NCR1	YPL006W	DYS1	P38791	387 aa		4.14	□□□□□ -1.75
NCR1	YPL006W	SHC1	P39000	512 aa		4.14	□□□□□ -1.75
NCR1	YPL006W	SUM1	P46676	1062 aa		4.14	□□□□□ -1.75
NCR1	YPL006W	ROD1	Q02805	837 aa		4.14	□□□□□ -1.75
NCR1	YPL006W	CRF1	Q04930	467 aa		4.14	□□□□□ -1.75
NCR1	YPL006W	AI5_BETA	Q9ZZX0	354 aa		4.14	□□□□□ -1.75
NCR1	YPL006W	PWP1	P21304	576 aa	Known RBP	4.14	□□□□□ -1.75
NCR1	YPL006W	MGT1	P26188	188 aa		4.14	□□□□□ -1.75
NCR1	YPL006W	YJL107C	P42947	387 aa		4.14	□□□□□ -1.75
NCR1	YPL006W	SAE2	P46946	345 aa		4.14	□□□□□ -1.75
NCR1	YPL006W	HUL5	P53119	910 aa		4.14	□□□□□ -1.75
NCR1	YPL006W	LSC1	P53598	329 aa	Known RBP	4.14	□□□□□ -1.75
NCR1	YPL006W	FMN1	Q03778	218 aa		4.14	□□□□□ -1.75
NCR1	YPL006W	SPH1	Q06160	661 aa		4.14	□□□□□ -1.75
NCR1	YPL006W	YDR018C	Q12185	396 aa		4.14	□□□□□ -1.75
NCR1	YPL006W	REC107	P21651	314 aa		4.13	□□□□□ -1.75
NCR1	YPL006W	COT1	P32798	439 aa		4.13	□□□□□ -1.75
NCR1	YPL006W	PCA1	P38360	1216 aa		4.13	□□□□□ -1.75
NCR1	YPL006W	STN1	P38960	494 aa		4.13	□□□□□ -1.75
NCR1	YPL006W	NPP2	P39997	493 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 45.2 ms