RNA–Protein interactions for RNA: YOR287C

RRP36, Transcript of Component of 90S preribosomes, yeast

Gene RRP36, Length 903 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP36	YOR287C	RSP5	P39940	809 aa	Known RBP	4.9	□□□□□ -1.63
RRP36	YOR287C	BAP3	P41815	604 aa		4.9	□□□□□ -1.63
RRP36	YOR287C	HUL5	P53119	910 aa		4.9	□□□□□ -1.63
RRP36	YOR287C	ATP25	Q03153	612 aa		4.9	□□□□□ -1.63
RRP36	YOR287C	YDR338C	Q05497	695 aa		4.9	□□□□□ -1.63
RRP36	YOR287C	RGC1	Q06108	1083 aa	Known RBP	4.9	□□□□□ -1.63
RRP36	YOR287C	ARO10	Q06408	635 aa		4.9	□□□□□ -1.63
RRP36	YOR287C	YTA7	P40340	1379 aa		4.9	□□□□□ -1.63
RRP36	YOR287C	DIF1	O13577	133 aa		4.89	□□□□□ -1.63
RRP36	YOR287C	SRP40	P32583	406 aa	Predicted RBP	4.89	□□□□□ -1.63
RRP36	YOR287C	EMP70	P32802	667 aa		4.89	□□□□□ -1.63
RRP36	YOR287C	SPC29	P33419	253 aa		4.89	□□□□□ -1.63
RRP36	YOR287C	YBR259W	P38338	688 aa		4.89	□□□□□ -1.63
RRP36	YOR287C	YJL206C	P39529	758 aa		4.89	□□□□□ -1.63
RRP36	YOR287C	MTL1	P53214	551 aa		4.89	□□□□□ -1.63
RRP36	YOR287C	GAD1	Q04792	585 aa		4.89	□□□□□ -1.63
RRP36	YOR287C	CAN1	P04817	590 aa		4.88	□□□□□ -1.63
RRP36	YOR287C	UBS1	P38290	277 aa		4.88	□□□□□ -1.63
RRP36	YOR287C	YIL166C	P40445	542 aa		4.88	□□□□□ -1.63
RRP36	YOR287C	CDC53	Q12018	815 aa	Known RBP	4.88	□□□□□ -1.63
RRP36	YOR287C	ATG11	Q12527	1178 aa		4.88	□□□□□ -1.63
RRP36	YOR287C	SFB3	P38810	929 aa		4.87	□□□□□ -1.63
RRP36	YOR287C	LYS9	P38999	446 aa		4.87	□□□□□ -1.63
RRP36	YOR287C	ALY2	P47029	1046 aa		4.87	□□□□□ -1.63
RRP36	YOR287C	YJL049W	P47048	450 aa		4.87	□□□□□ -1.63
RRP36	YOR287C	PAN2	P53010	1115 aa	Predicted RBP	4.87	□□□□□ -1.63
RRP36	YOR287C	TAF3	Q12297	353 aa		4.87	□□□□□ -1.63
RRP36	YOR287C	SIR3	P06701	978 aa		4.86	□□□□□ -1.63
RRP36	YOR287C	YKL091C	P33324	310 aa	Known RBP	4.86	□□□□□ -1.63
RRP36	YOR287C	FMO1	P38866	432 aa		4.86	□□□□□ -1.63
RRP36	YOR287C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
RRP36	YOR287C	NDC80	P40460	691 aa		4.86	□□□□□ -1.63
RRP36	YOR287C	PRP31	P49704	494 aa	Predicted RBP	4.86	□□□□□ -1.63
RRP36	YOR287C	ZDS1	P50111	915 aa	Known RBP	4.86	□□□□□ -1.63
RRP36	YOR287C	NSE3	Q05541	303 aa		4.86	□□□□□ -1.63
RRP36	YOR287C	COQ11	Q05892	277 aa		4.86	□□□□□ -1.63
RRP36	YOR287C	THI7	Q05998	598 aa		4.86	□□□□□ -1.63
RRP36	YOR287C	ADE2	P21264	571 aa	Known RBP	4.85	□□□□□ -1.63
RRP36	YOR287C	ERG6	P25087	383 aa	Known RBP	4.85	□□□□□ -1.63
RRP36	YOR287C	DMC1	P25453	334 aa		4.85	□□□□□ -1.63
RRP36	YOR287C	MVD1	P32377	396 aa	Known RBP	4.85	□□□□□ -1.63
RRP36	YOR287C	YHR112C	P38716	378 aa		4.85	□□□□□ -1.63
RRP36	YOR287C	REV7	P38927	245 aa		4.85	□□□□□ -1.63
RRP36	YOR287C	CCT3	P39077	534 aa	Known RBP	4.85	□□□□□ -1.63
RRP36	YOR287C	YNL162W-A	Q3E7A8	72 aa		4.85	□□□□□ -1.63
RRP36	YOR287C	YOR131C	Q12486	218 aa		4.84	□□□□□ -1.63
RRP36	YOR287C	YKL033W-A	Q86ZR7	236 aa		4.84	□□□□□ -1.63
RRP36	YOR287C	Q0142	Q9ZZW4	58 aa		4.84	□□□□□ -1.63
RRP36	YOR287C	PYC1	P11154	1178 aa	Known RBP	4.83	□□□□□ -1.64
RRP36	YOR287C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
RRP36	YOR287C	ECM1	P39715	212 aa		4.83	□□□□□ -1.64
RRP36	YOR287C	YBP2	P53169	641 aa		4.83	□□□□□ -1.64
RRP36	YOR287C	YAP1802	P53309	568 aa		4.83	□□□□□ -1.64
RRP36	YOR287C	YLR149C	Q99296	730 aa		4.83	□□□□□ -1.64
RRP36	YOR287C	HRP1	Q99383	534 aa	Known RBP	4.83	□□□□□ -1.64
RRP36	YOR287C	SKI3	P17883	1432 aa	Known RBP	4.82	□□□□□ -1.64
RRP36	YOR287C	AFT2	Q08957	416 aa		4.82	□□□□□ -1.64
RRP36	YOR287C	MLH3	Q12083	715 aa		4.82	□□□□□ -1.64
RRP36	YOR287C	SPO11	P23179	398 aa		4.81	□□□□□ -1.64
RRP36	YOR287C	ILV6	P25605	309 aa	Known RBP	4.81	□□□□□ -1.64
RRP36	YOR287C	PHO11	P35842	467 aa		4.81	□□□□□ -1.64
RRP36	YOR287C	PHO12	P38693	467 aa		4.81	□□□□□ -1.64
RRP36	YOR287C	NUP60	P39705	539 aa		4.81	□□□□□ -1.64
RRP36	YOR287C	APM1	Q00776	475 aa	Predicted RBP	4.81	□□□□□ -1.64
RRP36	YOR287C	CTK1	Q03957	528 aa	Known RBP	4.81	□□□□□ -1.64
RRP36	YOR287C	IOC4	Q04213	475 aa		4.81	□□□□□ -1.64
RRP36	YOR287C	FPR4	Q06205	392 aa	Predicted RBP	4.81	□□□□□ -1.64
RRP36	YOR287C	GAL11	P19659	1081 aa		4.8	□□□□□ -1.64
RRP36	YOR287C	GLG1	P36143	616 aa		4.8	□□□□□ -1.64
RRP36	YOR287C	FHN1	P53279	174 aa		4.8	□□□□□ -1.64
RRP36	YOR287C	ARG5,6	Q01217	863 aa		4.8	□□□□□ -1.64
RRP36	YOR287C	HOF1	Q05080	669 aa		4.8	□□□□□ -1.64
RRP36	YOR287C	APL2	P36000	726 aa	Predicted RBP	4.79	□□□□□ -1.64
RRP36	YOR287C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
RRP36	YOR287C	YEL020C	P39994	560 aa		4.79	□□□□□ -1.64
RRP36	YOR287C	GET2	P40056	285 aa		4.79	□□□□□ -1.64
RRP36	YOR287C	CTR1	P49573	406 aa		4.79	□□□□□ -1.64
RRP36	YOR287C	ERR1	P0CX10	437 aa		4.78	□□□□□ -1.64
RRP36	YOR287C	ERR2	P0CX11	437 aa		4.78	□□□□□ -1.64
RRP36	YOR287C	GDH3	P39708	457 aa		4.78	□□□□□ -1.64
RRP36	YOR287C	BDH2	P39713	417 aa		4.78	□□□□□ -1.64
RRP36	YOR287C	ARG2	P40360	574 aa		4.78	□□□□□ -1.64
RRP36	YOR287C	ORC4	P54791	529 aa		4.78	□□□□□ -1.64
RRP36	YOR287C	RPN4	Q03465	531 aa		4.78	□□□□□ -1.64
RRP36	YOR287C	CIT2	P08679	460 aa		4.77	□□□□□ -1.65
RRP36	YOR287C	PPG1	P32838	368 aa		4.77	□□□□□ -1.65
RRP36	YOR287C	MTC2	P34246	357 aa		4.77	□□□□□ -1.65
RRP36	YOR287C	MCD4	P36051	919 aa		4.77	□□□□□ -1.65
RRP36	YOR287C	TRZ1	P36159	838 aa	Predicted RBP	4.77	□□□□□ -1.65
RRP36	YOR287C	BNA2	P47125	453 aa		4.77	□□□□□ -1.65
RRP36	YOR287C	MAL11	P53048	616 aa		4.77	□□□□□ -1.65
RRP36	YOR287C	USV1	Q12132	391 aa		4.77	□□□□□ -1.65
RRP36	YOR287C	MIP6	P38760	659 aa	Known RBP	4.76	□□□□□ -1.65
RRP36	YOR287C	YFL052W	P43551	465 aa		4.76	□□□□□ -1.65
RRP36	YOR287C	OSW7	P43611	510 aa		4.76	□□□□□ -1.65
RRP36	YOR287C	UBC9	P50623	157 aa	Predicted RBP	4.76	□□□□□ -1.65
RRP36	YOR287C	RNH70	P53331	553 aa		4.76	□□□□□ -1.65
RRP36	YOR287C	ATG4	P53867	494 aa		4.76	□□□□□ -1.65
RRP36	YOR287C	MRI1	Q06489	411 aa	Known RBP	4.76	□□□□□ -1.65
RRP36	YOR287C	THR1	P17423	357 aa	Known RBP	4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 65.1 ms