RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeastyeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP140YOR239W YDR179W-AQ03983 463 aa3.97□□□□□ -1.77
ABP140YOR239W TAF9Q05027 157 aa3.97□□□□□ -1.77
ABP140YOR239W SEC10Q06245 871 aa3.97□□□□□ -1.77
ABP140YOR239W YOR352WQ08816 343 aa3.97□□□□□ -1.77
ABP140YOR239W YOR289WQ12012 251 aaPredicted RBP3.97□□□□□ -1.77
ABP140YOR239W RRP6Q12149 733 aaKnown RBP3.97□□□□□ -1.77
ABP140YOR239W TAF3Q12297 353 aa3.97□□□□□ -1.77
ABP140YOR239W YRM1Q12340 786 aa3.97□□□□□ -1.77
ABP140YOR239W SNU66Q12420 587 aaPredicted RBP3.97□□□□□ -1.77
ABP140YOR239W RPS19AP07280 144 aaKnown RBP3.96□□□□□ -1.77
ABP140YOR239W RPS19BP07281 144 aaPredicted RBP3.96□□□□□ -1.77
ABP140YOR239W TIF1P10081 395 aaKnown RBP3.96□□□□□ -1.77
ABP140YOR239W KAR2P16474 682 aaKnown RBP3.96□□□□□ -1.77
ABP140YOR239W PRP6P19735 899 aaPredicted RBP3.96□□□□□ -1.77
ABP140YOR239W SLY41P22215 453 aa3.96□□□□□ -1.77
ABP140YOR239W OCA4P25366 362 aa3.96□□□□□ -1.77
ABP140YOR239W OAF3P36023 863 aa3.96□□□□□ -1.77
ABP140YOR239W UGA2P38067 497 aa3.96□□□□□ -1.77
ABP140YOR239W HXT5P38695 592 aa3.96□□□□□ -1.77
ABP140YOR239W TIF4631P39935 952 aaKnown RBP3.96□□□□□ -1.77
ABP140YOR239W PDS1P40316 373 aaPredicted RBP3.96□□□□□ -1.77
ABP140YOR239W ULP2P40537 1034 aaPredicted RBP3.96□□□□□ -1.77
ABP140YOR239W APS3P47064 194 aa3.96□□□□□ -1.77
ABP140YOR239W RFX1P48743 811 aa3.96□□□□□ -1.77
ABP140YOR239W MRM2P53123 320 aa3.96□□□□□ -1.77
ABP140YOR239W CSI1Q04368 295 aa3.96□□□□□ -1.77
ABP140YOR239W COX20Q04935 205 aa3.96□□□□□ -1.77
ABP140YOR239W COA4Q05809 96 aa3.96□□□□□ -1.77
ABP140YOR239W SMD2Q06217 110 aaKnown RBP3.96□□□□□ -1.77
ABP140YOR239W YOL057WQ08225 711 aa3.96□□□□□ -1.77
ABP140YOR239W CDC53Q12018 815 aaKnown RBP3.96□□□□□ -1.77
ABP140YOR239W YLR125WQ12138 136 aa3.96□□□□□ -1.77
ABP140YOR239W URB1P34241 1764 aaKnown RBP3.96□□□□□ -1.78
ABP140YOR239W ARG4P04076 463 aaPredicted RBP3.96□□□□□ -1.78
ABP140YOR239W CMD1P06787 147 aaKnown RBP3.96□□□□□ -1.78
ABP140YOR239W SUP45P12385 437 aaKnown RBP3.96□□□□□ -1.78
ABP140YOR239W PWP1P21304 576 aaKnown RBP3.96□□□□□ -1.78
ABP140YOR239W YCR051WP25631 222 aa3.96□□□□□ -1.78
ABP140YOR239W SMI1P32566 505 aa3.96□□□□□ -1.78
ABP140YOR239W VMA8P32610 256 aaKnown RBP3.96□□□□□ -1.78
ABP140YOR239W PEP12P32854 288 aa3.96□□□□□ -1.78
ABP140YOR239W APL2P36000 726 aaPredicted RBP3.96□□□□□ -1.78
ABP140YOR239W VPS21P36017 210 aaKnown RBP3.96□□□□□ -1.78
ABP140YOR239W LAS1P36146 502 aaPredicted RBP3.96□□□□□ -1.78
ABP140YOR239W AAP1P37898 856 aaKnown RBP3.96□□□□□ -1.78
ABP140YOR239W ATP3P38077 311 aaKnown RBP3.96□□□□□ -1.78
ABP140YOR239W YBR062CP38239 180 aa3.96□□□□□ -1.78
ABP140YOR239W SIP5P40210 489 aaKnown RBP3.96□□□□□ -1.78
ABP140YOR239W SPC105P53148 917 aa3.96□□□□□ -1.78
ABP140YOR239W NGL3Q03210 505 aa3.96□□□□□ -1.78
ABP140YOR239W TAP42Q04372 366 aa3.96□□□□□ -1.78
ABP140YOR239W MCM21Q06675 368 aa3.96□□□□□ -1.78
ABP140YOR239W YPL277CQ08989 487 aa3.96□□□□□ -1.78
ABP140YOR239W RTC5Q12108 567 aaKnown RBP3.96□□□□□ -1.78
ABP140YOR239W YIL002W-AQ3E7Z5 69 aa3.96□□□□□ -1.78
ABP140YOR239W RAS1P01119 309 aa3.95□□□□□ -1.78
ABP140YOR239W KIN2P13186 1147 aaKnown RBP3.95□□□□□ -1.78
ABP140YOR239W SEC63P14906 663 aa3.95□□□□□ -1.78
ABP140YOR239W TRM1P15565 570 aaKnown RBP3.95□□□□□ -1.78
ABP140YOR239W VMA2P16140 517 aaKnown RBP3.95□□□□□ -1.78
ABP140YOR239W VMA4P22203 233 aaKnown RBP3.95□□□□□ -1.78
ABP140YOR239W RAD57P25301 460 aa3.95□□□□□ -1.78
ABP140YOR239W YDJ1P25491 409 aaKnown RBP3.95□□□□□ -1.78
ABP140YOR239W SMY1P32364 656 aaKnown RBP3.95□□□□□ -1.78
ABP140YOR239W TFC4P33339 1025 aa3.95□□□□□ -1.78
ABP140YOR239W YAP3P38749 330 aa3.95□□□□□ -1.78
ABP140YOR239W TDA3P38758 523 aa3.95□□□□□ -1.78
ABP140YOR239W RPN10P38886 268 aaKnown RBP3.95□□□□□ -1.78
ABP140YOR239W AST2P39945 430 aaKnown RBP3.95□□□□□ -1.78
ABP140YOR239W YJR008WP47085 338 aa3.95□□□□□ -1.78
ABP140YOR239W ENT3P47160 408 aa3.95□□□□□ -1.78
ABP140YOR239W SRB7P47822 140 aa3.95□□□□□ -1.78
ABP140YOR239W GNP1P48813 663 aa3.95□□□□□ -1.78
ABP140YOR239W UBP15P50101 1230 aa3.95□□□□□ -1.78
ABP140YOR239W ATP22P50273 684 aaPredicted RBP3.95□□□□□ -1.78
ABP140YOR239W KAP114P53067 1004 aa3.95□□□□□ -1.78
ABP140YOR239W RBG2P53295 368 aaKnown RBP3.95□□□□□ -1.78
ABP140YOR239W FYV6P53913 173 aa3.95□□□□□ -1.78
ABP140YOR239W YNL108CP53929 270 aa3.95□□□□□ -1.78
ABP140YOR239W YNL058CP53947 316 aa3.95□□□□□ -1.78
ABP140YOR239W ERG5P54781 538 aa3.95□□□□□ -1.78
ABP140YOR239W TMA64Q04600 565 aaKnown RBP3.95□□□□□ -1.78
ABP140YOR239W ENT2Q05785 613 aa3.95□□□□□ -1.78
ABP140YOR239W PIG1Q06216 648 aa3.95□□□□□ -1.78
ABP140YOR239W RSC3Q06639 885 aa3.95□□□□□ -1.78
ABP140YOR239W YLR031WQ07978 186 aa3.95□□□□□ -1.78
ABP140YOR239W SMC5Q08204 1093 aa3.95□□□□□ -1.78
ABP140YOR239W MED4Q12343 284 aa3.95□□□□□ -1.78
ABP140YOR239W SPO21Q12411 609 aa3.95□□□□□ -1.78
ABP140YOR239W ILS1P09436 1072 aaKnown RBP3.94□□□□□ -1.78
ABP140YOR239W MAK16P10962 306 aaPredicted RBP3.94□□□□□ -1.78
ABP140YOR239W PYC1P11154 1178 aaKnown RBP3.94□□□□□ -1.78
ABP140YOR239W BAS1P22035 811 aa3.94□□□□□ -1.78
ABP140YOR239W PEX1P24004 1043 aa3.94□□□□□ -1.78
ABP140YOR239W PRP22P24384 1145 aaKnown RBP3.94□□□□□ -1.78
ABP140YOR239W URA1P28272 314 aaPredicted RBP3.94□□□□□ -1.78
ABP140YOR239W PPH3P32345 308 aa3.94□□□□□ -1.78
ABP140YOR239W SRB4P32569 687 aa3.94□□□□□ -1.78
ABP140YOR239W PTR2P32901 601 aa3.94□□□□□ -1.78
ABP140YOR239W RSM22P36056 628 aa3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 854.4 ms