RNA–Protein interactions for RNA: YOR076C

SKI7, Transcript of Coupling protein for the Ski complex and cytoplasmic exosome, yeast

Gene SKI7, Length 2,244 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI7	YOR076C	YPL283W-B	P0CX97	160 aa		0.25	□□□□□ -2.37
SKI7	YOR076C	YPR204C-A	P0CX98	160 aa		0.25	□□□□□ -2.37
SKI7	YOR076C	ABF1	P14164	731 aa		0.25	□□□□□ -2.37
SKI7	YOR076C	CDC48	P25694	835 aa	Known RBP	0.25	□□□□□ -2.37
SKI7	YOR076C	TYE7	P33122	291 aa	Predicted RBP	0.25	□□□□□ -2.37
SKI7	YOR076C	MRPL4	P36517	319 aa		0.25	□□□□□ -2.37
SKI7	YOR076C	APD1	P38281	316 aa		0.25	□□□□□ -2.37
SKI7	YOR076C	SFB3	P38810	929 aa		0.25	□□□□□ -2.37
SKI7	YOR076C	VRG4	P40107	337 aa		0.25	□□□□□ -2.37
SKI7	YOR076C	ROK1	P45818	564 aa	Predicted RBP	0.25	□□□□□ -2.37
SKI7	YOR076C	IDP3	P53982	420 aa	Known RBP	0.25	□□□□□ -2.37
SKI7	YOR076C	MRL1	Q06815	381 aa		0.25	□□□□□ -2.37
SKI7	YOR076C	RFA1	P22336	621 aa	Known RBP	0.24	□□□□□ -2.37
SKI7	YOR076C	YCP4	P25349	247 aa	Known RBP	0.24	□□□□□ -2.37
SKI7	YOR076C	SET3	P36124	751 aa		0.24	□□□□□ -2.37
SKI7	YOR076C	YBR238C	P38330	731 aa	Known RBP	0.24	□□□□□ -2.37
SKI7	YOR076C	IRR1	P40541	1150 aa		0.24	□□□□□ -2.37
SKI7	YOR076C	MDJ2	P42834	146 aa		0.24	□□□□□ -2.37
SKI7	YOR076C	BOP3	P53958	396 aa		0.24	□□□□□ -2.37
SKI7	YOR076C	ARG7	Q04728	441 aa		0.24	□□□□□ -2.37
SKI7	YOR076C	GAD1	Q04792	585 aa		0.24	□□□□□ -2.37
SKI7	YOR076C	CRC1	Q12289	327 aa		0.24	□□□□□ -2.37
SKI7	YOR076C	TPK2	P06245	380 aa		0.23	□□□□□ -2.37
SKI7	YOR076C	URE2	P23202	354 aa	Known RBP	0.23	□□□□□ -2.37
SKI7	YOR076C	MVD1	P32377	396 aa	Known RBP	0.23	□□□□□ -2.37
SKI7	YOR076C	PHO11	P35842	467 aa		0.23	□□□□□ -2.37
SKI7	YOR076C	YBR259W	P38338	688 aa		0.23	□□□□□ -2.37
SKI7	YOR076C	PHO12	P38693	467 aa		0.23	□□□□□ -2.37
SKI7	YOR076C	LYS20	P48570	428 aa	Known RBP	0.23	□□□□□ -2.37
SKI7	YOR076C	RGC1	Q06108	1083 aa	Known RBP	0.23	□□□□□ -2.37
SKI7	YOR076C	VPS36	Q06696	566 aa		0.23	□□□□□ -2.37
SKI7	YOR076C	BMS1	Q08965	1183 aa	Known RBP	0.23	□□□□□ -2.37
SKI7	YOR076C	MDM20	Q12387	796 aa	Known RBP	0.23	□□□□□ -2.37
SKI7	YOR076C	RKM4	Q12504	494 aa		0.23	□□□□□ -2.37
SKI7	YOR076C	RPS9A	O13516	197 aa	Known RBP	0.23	□□□□□ -2.37
SKI7	YOR076C	THR1	P17423	357 aa	Known RBP	0.23	□□□□□ -2.37
SKI7	YOR076C	SCT1	P32784	759 aa		0.23	□□□□□ -2.37
SKI7	YOR076C	HSL7	P38274	827 aa		0.23	□□□□□ -2.37
SKI7	YOR076C	CTK1	Q03957	528 aa	Known RBP	0.23	□□□□□ -2.37
SKI7	YOR076C	MUS81	Q04149	632 aa	Predicted RBP	0.23	□□□□□ -2.37
SKI7	YOR076C	YAP1	P19880	650 aa	Known RBP	0.22	□□□□□ -2.37
SKI7	YOR076C	CDC12	P32468	407 aa	Known RBP	0.22	□□□□□ -2.37
SKI7	YOR076C	YKL107W	P34251	309 aa		0.22	□□□□□ -2.37
SKI7	YOR076C	GRS1	P38088	690 aa	Known RBP	0.22	□□□□□ -2.37
SKI7	YOR076C	YEL068C	P39977	110 aa		0.22	□□□□□ -2.37
SKI7	YOR076C	YIR016W	P40572	265 aa		0.22	□□□□□ -2.37
SKI7	YOR076C	SAD1	P43589	448 aa		0.22	□□□□□ -2.37
SKI7	YOR076C	MDV1	P47025	714 aa		0.22	□□□□□ -2.37
SKI7	YOR076C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	0.22	□□□□□ -2.37	not detected
SKI7	YOR076C	HOS2	P53096	452 aa	Predicted RBP	0.22	□□□□□ -2.37
SKI7	YOR076C	IMP4	P53941	290 aa	Known RBP	0.22	□□□□□ -2.37
SKI7	YOR076C	YKR011C	Q02209	353 aa		0.22	□□□□□ -2.37
SKI7	YOR076C	TMA46	Q12000	345 aa	Known RBP	0.22	□□□□□ -2.37
SKI7	YOR076C	CYB2	P00175	591 aa		0.22	□□□□□ -2.37
SKI7	YOR076C	YEL1	P34225	687 aa		0.22	□□□□□ -2.37
SKI7	YOR076C	SIC1	P38634	284 aa		0.22	□□□□□ -2.37
SKI7	YOR076C	ECM1	P39715	212 aa		0.22	□□□□□ -2.37
SKI7	YOR076C	USV1	Q12132	391 aa		0.22	□□□□□ -2.37
SKI7	YOR076C	UBX3	Q12229	455 aa		0.22	□□□□□ -2.37
SKI7	YOR076C	ZRT2	Q12436	422 aa		0.22	□□□□□ -2.37
SKI7	YOR076C	AIM44	Q99299	758 aa		0.22	□□□□□ -2.37
SKI7	YOR076C	LEU2	P04173	364 aa	Predicted RBP	0.21	□□□□□ -2.38
SKI7	YOR076C	YCR043C	P25361	127 aa		0.21	□□□□□ -2.38
SKI7	YOR076C	AAD3	P25612	363 aa		0.21	□□□□□ -2.38
SKI7	YOR076C	FMO1	P38866	432 aa		0.21	□□□□□ -2.38
SKI7	YOR076C	SAK1	P38990	1142 aa		0.21	□□□□□ -2.38
SKI7	YOR076C	NUP60	P39705	539 aa		0.21	□□□□□ -2.38
SKI7	YOR076C	CFD1	P40558	293 aa		0.21	□□□□□ -2.38
SKI7	YOR076C	CEP3	P40969	608 aa		0.21	□□□□□ -2.38
SKI7	YOR076C	KRI1	P42846	591 aa	Known RBP	0.21	□□□□□ -2.38
SKI7	YOR076C	RPL34A	P87262	121 aa	Predicted RBP	0.21	□□□□□ -2.38
SKI7	YOR076C	NGL2	Q03264	515 aa	Known RBP	0.21	□□□□□ -2.38
SKI7	YOR076C	IZH3	Q07959	543 aa		0.21	□□□□□ -2.38
SKI7	YOR076C	GCR1	P07261	785 aa		0.21	□□□□□ -2.38
SKI7	YOR076C	HEM1	P09950	548 aa	Predicted RBP	0.21	□□□□□ -2.38
SKI7	YOR076C	YEL076C-A	P0CX16	216 aa		0.21	□□□□□ -2.38
SKI7	YOR076C	YLR464W	P0CX17	216 aa		0.21	□□□□□ -2.38
SKI7	YOR076C	INO1	P11986	533 aa		0.21	□□□□□ -2.38
SKI7	YOR076C	LYP1	P32487	611 aa		0.21	□□□□□ -2.38
SKI7	YOR076C	RPC34	P32910	317 aa		0.21	□□□□□ -2.38
SKI7	YOR076C	APL3	P38065	1025 aa		0.21	□□□□□ -2.38
SKI7	YOR076C	YEL076C	P39971	216 aa		0.21	□□□□□ -2.38
SKI7	YOR076C	YBP2	P53169	641 aa		0.21	□□□□□ -2.38
SKI7	YOR076C	YGR151C	P53287	111 aa		0.21	□□□□□ -2.38
SKI7	YOR076C	TEX1	P53851	422 aa	Known RBP	0.21	□□□□□ -2.38
SKI7	YOR076C	HDA1	P53973	706 aa		0.21	□□□□□ -2.38
SKI7	YOR076C	ADE8	P04161	214 aa		0.2	□□□□□ -2.38
SKI7	YOR076C	LDB16	P25587	256 aa		0.2	□□□□□ -2.38
SKI7	YOR076C	PPZ1	P26570	692 aa		0.2	□□□□□ -2.38
SKI7	YOR076C	APT2	P36973	181 aa		0.2	□□□□□ -2.38
SKI7	YOR076C	LYS9	P38999	446 aa		0.2	□□□□□ -2.38
SKI7	YOR076C	YIL024C	P40543	189 aa		0.2	□□□□□ -2.38
SKI7	YOR076C	SSY5	P47002	699 aa		0.2	□□□□□ -2.38
SKI7	YOR076C	CPR8	P53728	308 aa		0.2	□□□□□ -2.38
SKI7	YOR076C	YLR281C	Q05863	155 aa		0.2	□□□□□ -2.38
SKI7	YOR076C	RSC3	Q06639	885 aa		0.2	□□□□□ -2.38
SKI7	YOR076C	DSE3	Q08729	430 aa		0.2	□□□□□ -2.38
SKI7	YOR076C	RTT10	Q08924	1013 aa		0.2	□□□□□ -2.38
SKI7	YOR076C	GPR1	Q12361	961 aa		0.2	□□□□□ -2.38
SKI7	YOR076C	YMR084W	A2P2R3	262 aa		0.19	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms