RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeastyeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK2YNR031C BRF1P29056 596 aa1.61□□□□□ -2.15
SSK2YNR031C NAB2P32505 525 aaKnown RBP RIP-Chip data1.61□□□□□ -2.15not detected
SSK2YNR031C SWI3P32591 825 aa1.61□□□□□ -2.15
SSK2YNR031C APD1P38281 316 aa1.61□□□□□ -2.15
SSK2YNR031C RRF1P38771 230 aa1.61□□□□□ -2.15
SSK2YNR031C SRB7P47822 140 aa1.61□□□□□ -2.15
SSK2YNR031C TAN1P53072 289 aaPredicted RBP1.61□□□□□ -2.15
SSK2YNR031C GUP1P53154 560 aa1.61□□□□□ -2.15
SSK2YNR031C NMA2P53204 395 aa1.61□□□□□ -2.15
SSK2YNR031C CNM67P53865 581 aaKnown RBP1.61□□□□□ -2.15
SSK2YNR031C RSM10Q03201 203 aa1.61□□□□□ -2.15
SSK2YNR031C RPN4Q03465 531 aa1.61□□□□□ -2.15
SSK2YNR031C CLU1Q03690 1277 aaKnown RBP1.61□□□□□ -2.15
SSK2YNR031C PHM6Q05637 104 aa1.61□□□□□ -2.15
SSK2YNR031C FAR10Q06001 478 aa1.61□□□□□ -2.15
SSK2YNR031C MAG2Q06436 670 aaKnown RBP1.61□□□□□ -2.15
SSK2YNR031C PMT7Q06644 662 aa1.61□□□□□ -2.15
SSK2YNR031C YPL191CQ08930 360 aa1.61□□□□□ -2.15
SSK2YNR031C SGT2Q12118 346 aaKnown RBP1.61□□□□□ -2.15
SSK2YNR031C YBL111CQ3E7Y5 667 aa1.61□□□□□ -2.15
SSK2YNR031C COQ4O13525 335 aa1.61□□□□□ -2.15
SSK2YNR031C IPP1P00817 287 aaKnown RBP1.61□□□□□ -2.15
SSK2YNR031C ARG81P05085 880 aa1.61□□□□□ -2.15
SSK2YNR031C SNF1P06782 633 aaKnown RBP1.61□□□□□ -2.15
SSK2YNR031C TRK1P12685 1235 aa1.61□□□□□ -2.15
SSK2YNR031C MRPL25P23369 157 aa1.61□□□□□ -2.15
SSK2YNR031C LIP5P32875 414 aa1.61□□□□□ -2.15
SSK2YNR031C YKL097CP34245 136 aa1.61□□□□□ -2.15
SSK2YNR031C SPT23P35210 1082 aa1.61□□□□□ -2.15
SSK2YNR031C KDX1P36005 433 aa1.61□□□□□ -2.15
SSK2YNR031C MAK5P38112 773 aaPredicted RBP1.61□□□□□ -2.15
SSK2YNR031C MEF2P39677 819 aa1.61□□□□□ -2.15
SSK2YNR031C SAH1P39954 449 aaKnown RBP1.61□□□□□ -2.15
SSK2YNR031C DAS1P47005 663 aa1.61□□□□□ -2.15
SSK2YNR031C NPA3P47122 385 aa1.61□□□□□ -2.15
SSK2YNR031C ECL1P48235 211 aa1.61□□□□□ -2.15
SSK2YNR031C YNL115CP53925 644 aa1.61□□□□□ -2.15
SSK2YNR031C YEL077CQ3E7X8 1277 aa1.61□□□□□ -2.15
SSK2YNR031C MEC1P38111 2368 aa1.61□□□□□ -2.15
SSK2YNR031C CET1O13297 549 aaPredicted RBP1.61□□□□□ -2.15
SSK2YNR031C HIS4P00815 799 aaKnown RBP1.61□□□□□ -2.15
SSK2YNR031C TIF1P10081 395 aaKnown RBP1.61□□□□□ -2.15
SSK2YNR031C APE1P14904 514 aa1.61□□□□□ -2.15
SSK2YNR031C SRO9P25567 434 aaKnown RBP1.61□□□□□ -2.15
SSK2YNR031C MLS1P30952 554 aa1.61□□□□□ -2.15
SSK2YNR031C SEC21P32074 935 aaKnown RBP1.61□□□□□ -2.15
SSK2YNR031C ANP1P32629 500 aa1.61□□□□□ -2.15
SSK2YNR031C MRE11P32829 692 aa1.61□□□□□ -2.15
SSK2YNR031C MRT4P33201 236 aaKnown RBP1.61□□□□□ -2.15
SSK2YNR031C MYO3P36006 1272 aa1.61□□□□□ -2.15
SSK2YNR031C MET1P36150 593 aa1.61□□□□□ -2.15
SSK2YNR031C RIX1P38883 763 aaPredicted RBP1.61□□□□□ -2.15
SSK2YNR031C YJL070CP40361 888 aa1.61□□□□□ -2.15
SSK2YNR031C MAD1P40957 749 aa1.61□□□□□ -2.15
SSK2YNR031C NNF1P47149 201 aa1.61□□□□□ -2.15
SSK2YNR031C COS5P47187 383 aa1.61□□□□□ -2.15
SSK2YNR031C TAM41P53230 385 aa1.61□□□□□ -2.15
SSK2YNR031C ALF1P53904 254 aa1.61□□□□□ -2.15
SSK2YNR031C FCP1Q03254 732 aa1.61□□□□□ -2.15
SSK2YNR031C YCG1Q06680 1035 aa1.61□□□□□ -2.15
SSK2YNR031C FMP45Q07651 309 aa1.61□□□□□ -2.15
SSK2YNR031C APC5Q08683 685 aa1.61□□□□□ -2.15
SSK2YNR031C GNT1Q12096 491 aa1.61□□□□□ -2.15
SSK2YNR031C CDC31P06704 161 aaKnown RBP1.6□□□□□ -2.15
SSK2YNR031C CAD1P24813 409 aaKnown RBP1.6□□□□□ -2.15
SSK2YNR031C OCA4P25366 362 aa1.6□□□□□ -2.15
SSK2YNR031C FUN30P31380 1131 aa1.6□□□□□ -2.15
SSK2YNR031C SKG6P32900 734 aaPredicted RBP1.6□□□□□ -2.15
SSK2YNR031C NPR3P38742 1146 aa1.6□□□□□ -2.15
SSK2YNR031C KEL1P38853 1164 aaKnown RBP1.6□□□□□ -2.15
SSK2YNR031C SAK1P38990 1142 aa1.6□□□□□ -2.15
SSK2YNR031C YER034WP40022 185 aaKnown RBP1.6□□□□□ -2.15
SSK2YNR031C IRR1P40541 1150 aa1.6□□□□□ -2.15
SSK2YNR031C ACF4P47129 309 aa1.6□□□□□ -2.15
SSK2YNR031C CUE3P53137 624 aaKnown RBP1.6□□□□□ -2.15
SSK2YNR031C YGL082WP53155 381 aa1.6□□□□□ -2.15
SSK2YNR031C HST2P53686 357 aa1.6□□□□□ -2.15
SSK2YNR031C HXT15P54854 567 aa1.6□□□□□ -2.15
SSK2YNR031C CIK1Q01649 594 aa1.6□□□□□ -2.15
SSK2YNR031C SRP1Q02821 542 aaKnown RBP1.6□□□□□ -2.15
SSK2YNR031C VPS60Q03390 229 aa1.6□□□□□ -2.15
SSK2YNR031C TCO89Q08921 799 aa1.6□□□□□ -2.15
SSK2YNR031C HFI1Q12060 488 aa1.6□□□□□ -2.15
SSK2YNR031C TY4A-HQ6Q5P6 413 aa1.6□□□□□ -2.15
SSK2YNR031C PMA1P05030 918 aaKnown RBP1.6□□□□□ -2.15
SSK2YNR031C ILS1P09436 1072 aaKnown RBP1.6□□□□□ -2.15
SSK2YNR031C CLB3P24870 427 aa1.6□□□□□ -2.15
SSK2YNR031C SHE4P51534 789 aa1.6□□□□□ -2.15
SSK2YNR031C RNH70P53331 553 aa1.6□□□□□ -2.15
SSK2YNR031C GCR2Q01722 534 aa1.6□□□□□ -2.15
SSK2YNR031C ENT2Q05785 613 aa1.6□□□□□ -2.15
SSK2YNR031C ORM2Q06144 216 aa1.6□□□□□ -2.15
SSK2YNR031C NDL1Q06568 189 aa1.6□□□□□ -2.15
SSK2YNR031C ARR1Q06596 294 aa1.6□□□□□ -2.15
SSK2YNR031C OSW2Q12202 724 aa1.6□□□□□ -2.15
SSK2YNR031C KCS1Q12494 1050 aa1.6□□□□□ -2.15
SSK2YNR031C PMS1P14242 873 aa1.6□□□□□ -2.15
SSK2YNR031C GFA1P14742 717 aaKnown RBP1.6□□□□□ -2.15
SSK2YNR031C VPS3P23643 1011 aa1.6□□□□□ -2.15
SSK2YNR031C MDL2P33311 773 aa1.6□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 30 ms