RNA–Protein interactions for RNA: YMR048W

CSM3, Transcript of Replication fork associated factor, yeastyeast

Gene CSM3, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM3YMR048W NDJ1Q12366 352 aa5.38□□□□□ -1.55
CSM3YMR048W ILV6P25605 309 aaKnown RBP5.37□□□□□ -1.55
CSM3YMR048W PRP31P49704 494 aaPredicted RBP5.37□□□□□ -1.55
CSM3YMR048W SUT2Q12286 268 aa5.37□□□□□ -1.55
CSM3YMR048W YOR131CQ12486 218 aa5.37□□□□□ -1.55
CSM3YMR048W DMC1P25453 334 aa5.36□□□□□ -1.55
CSM3YMR048W HIR1P32479 840 aa5.36□□□□□ -1.55
CSM3YMR048W MTC2P34246 357 aa5.36□□□□□ -1.55
CSM3YMR048W CBR1P38626 284 aaKnown RBP5.36□□□□□ -1.55
CSM3YMR048W CCT3P39077 534 aaKnown RBP5.36□□□□□ -1.55
CSM3YMR048W TAH11P47112 604 aa5.36□□□□□ -1.55
CSM3YMR048W SMX3P54999 86 aaPredicted RBP5.36□□□□□ -1.55
CSM3YMR048W LGE1Q02796 332 aaKnown RBP5.36□□□□□ -1.55
CSM3YMR048W YDR338CQ05497 695 aa5.36□□□□□ -1.55
CSM3YMR048W MON2P48563 1636 aaPredicted RBP5.36□□□□□ -1.55
CSM3YMR048W SIR3P06701 978 aa5.35□□□□□ -1.55
CSM3YMR048W YIL166CP40445 542 aa5.35□□□□□ -1.55
CSM3YMR048W APL2P36000 726 aaPredicted RBP5.34□□□□□ -1.55
CSM3YMR048W BNA2P47125 453 aa5.34□□□□□ -1.55
CSM3YMR048W ORC4P54791 529 aa5.34□□□□□ -1.55
CSM3YMR048W CTK1Q03957 528 aaKnown RBP5.34□□□□□ -1.55
CSM3YMR048W YOL098CQ12496 1037 aa5.34□□□□□ -1.55
CSM3YMR048W YKL033W-AQ86ZR7 236 aa5.34□□□□□ -1.55
CSM3YMR048W STO1P34160 861 aaKnown RBP5.33□□□□□ -1.56
CSM3YMR048W MCD4P36051 919 aa5.33□□□□□ -1.56
CSM3YMR048W TRZ1P36159 838 aaPredicted RBP5.33□□□□□ -1.56
CSM3YMR048W APT2P36973 181 aa5.33□□□□□ -1.56
CSM3YMR048W ARG5,6Q01217 863 aa5.33□□□□□ -1.56
CSM3YMR048W TUB1P09733 447 aaKnown RBP5.32□□□□□ -1.56
CSM3YMR048W PYC1P11154 1178 aaKnown RBP5.32□□□□□ -1.56
CSM3YMR048W ADE2P21264 571 aaKnown RBP5.32□□□□□ -1.56
CSM3YMR048W PPZ2P33329 710 aa5.32□□□□□ -1.56
CSM3YMR048W YHR112CP38716 378 aa5.32□□□□□ -1.56
CSM3YMR048W RPN10P38886 268 aaKnown RBP5.32□□□□□ -1.56
CSM3YMR048W YFL052WP43551 465 aa5.32□□□□□ -1.56
CSM3YMR048W CAF16P43569 289 aa5.32□□□□□ -1.56
CSM3YMR048W MAL11P53048 616 aa5.32□□□□□ -1.56
CSM3YMR048W MCM21Q06675 368 aa5.32□□□□□ -1.56
CSM3YMR048W TAF3Q12297 353 aa5.32□□□□□ -1.56
CSM3YMR048W MET6P05694 767 aaKnown RBP5.31□□□□□ -1.56
CSM3YMR048W SRP40P32583 406 aaPredicted RBP5.31□□□□□ -1.56
CSM3YMR048W MIP6P38760 659 aaKnown RBP5.31□□□□□ -1.56
CSM3YMR048W YJL206CP39529 758 aa5.31□□□□□ -1.56
CSM3YMR048W NDC80P40460 691 aa5.31□□□□□ -1.56
CSM3YMR048W RPN4Q03465 531 aa5.31□□□□□ -1.56
CSM3YMR048W MDM12Q92328 271 aa5.31□□□□□ -1.56
CSM3YMR048W YLR149CQ99296 730 aa5.31□□□□□ -1.56
CSM3YMR048W NPY1P53164 384 aa5.3□□□□□ -1.56
CSM3YMR048W MTL1P53214 551 aa5.3□□□□□ -1.56
CSM3YMR048W SNP1Q00916 300 aaPredicted RBP5.3□□□□□ -1.56
CSM3YMR048W BNR1P40450 1375 aa5.29□□□□□ -1.56
CSM3YMR048W ERR1P0CX10 437 aa5.29□□□□□ -1.56
CSM3YMR048W ERR2P0CX11 437 aa5.29□□□□□ -1.56
CSM3YMR048W GSY1P23337 708 aa5.29□□□□□ -1.56
CSM3YMR048W MVD1P32377 396 aaKnown RBP5.29□□□□□ -1.56
CSM3YMR048W FMO1P38866 432 aa5.29□□□□□ -1.56
CSM3YMR048W RIX1P38883 763 aaPredicted RBP5.29□□□□□ -1.56
CSM3YMR048W NUP60P39705 539 aa5.29□□□□□ -1.56
CSM3YMR048W ARG2P40360 574 aa5.29□□□□□ -1.56
CSM3YMR048W PAN2P53010 1115 aaPredicted RBP5.29□□□□□ -1.56
CSM3YMR048W SFB3P38810 929 aa5.28□□□□□ -1.56
CSM3YMR048W LYS9P38999 446 aa5.28□□□□□ -1.56
CSM3YMR048W CCT7P42943 550 aaKnown RBP5.28□□□□□ -1.56
CSM3YMR048W IMO32P53219 342 aa5.28□□□□□ -1.56
CSM3YMR048W COQ11Q05892 277 aa5.28□□□□□ -1.56
CSM3YMR048W ARO10Q06408 635 aa5.28□□□□□ -1.56
CSM3YMR048W ADY2P25613 283 aa5.27□□□□□ -1.57
CSM3YMR048W GLG1P36143 616 aa5.27□□□□□ -1.57
CSM3YMR048W OCA5P38738 679 aa5.27□□□□□ -1.57
CSM3YMR048W CTR1P49573 406 aa5.27□□□□□ -1.57
CSM3YMR048W FHN1P53279 174 aa5.27□□□□□ -1.57
CSM3YMR048W APM1Q00776 475 aaPredicted RBP5.27□□□□□ -1.57
CSM3YMR048W REC102Q02721 264 aa5.27□□□□□ -1.57
CSM3YMR048W CLF1Q12309 687 aaPredicted RBP5.27□□□□□ -1.57
CSM3YMR048W RPN13O13563 156 aa5.26□□□□□ -1.57
CSM3YMR048W CDC9P04819 755 aa5.26□□□□□ -1.57
CSM3YMR048W PEX2P32800 271 aa5.26□□□□□ -1.57
CSM3YMR048W YKL091CP33324 310 aaKnown RBP5.26□□□□□ -1.57
CSM3YMR048W HSL7P38274 827 aa5.26□□□□□ -1.57
CSM3YMR048W BDH2P39713 417 aa5.26□□□□□ -1.57
CSM3YMR048W ATG4P53867 494 aa5.26□□□□□ -1.57
CSM3YMR048W HMO1Q03973 246 aaKnown RBP5.26□□□□□ -1.57
CSM3YMR048W NHX1Q04121 633 aa5.26□□□□□ -1.57
CSM3YMR048W YNL162W-AQ3E7A8 72 aa5.26□□□□□ -1.57
CSM3YMR048W AIM44Q99299 758 aa5.26□□□□□ -1.57
CSM3YMR048W HRP1Q99383 534 aaKnown RBP5.26□□□□□ -1.57
CSM3YMR048W Q0142Q9ZZW4 58 aa5.26□□□□□ -1.57
CSM3YMR048W YTA7P40340 1379 aa5.26□□□□□ -1.57
CSM3YMR048W TIM23P32897 222 aa5.25□□□□□ -1.57
CSM3YMR048W PHO11P35842 467 aa5.25□□□□□ -1.57
CSM3YMR048W YKR018CP36114 725 aa5.25□□□□□ -1.57
CSM3YMR048W PHO12P38693 467 aa5.25□□□□□ -1.57
CSM3YMR048W GID8P40208 455 aa5.25□□□□□ -1.57
CSM3YMR048W RPN7Q06103 429 aaKnown RBP5.25□□□□□ -1.57
CSM3YMR048W SPO11P23179 398 aa5.24□□□□□ -1.57
CSM3YMR048W HOG1P32485 435 aa5.24□□□□□ -1.57
CSM3YMR048W FLO10P36170 1169 aa5.24□□□□□ -1.57
CSM3YMR048W PBP2P38151 413 aaKnown RBP RIP-Chip data5.24□□□□□ -1.57not detected
CSM3YMR048W UBS1P38290 277 aa5.24□□□□□ -1.57
CSM3YMR048W HRB1P38922 454 aaKnown RBP RIP-Chip data5.24□□□□□ -1.57not detected
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms