RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C INM2Q05533 292 aa5.64□□□□□ -1.51
CCS1YMR038C ACE2P21192 770 aa5.63□□□□□ -1.51
CCS1YMR038C POL12P38121 705 aaPredicted RBP5.63□□□□□ -1.51
CCS1YMR038C YHR020WP38708 688 aaKnown RBP5.63□□□□□ -1.51
CCS1YMR038C SEC26P41810 973 aaKnown RBP5.63□□□□□ -1.51
CCS1YMR038C TIM54P47045 478 aa5.63□□□□□ -1.51
CCS1YMR038C HUL5P53119 910 aa5.63□□□□□ -1.51
CCS1YMR038C SVS1Q12254 260 aa5.63□□□□□ -1.51
CCS1YMR038C YDL177CQ12257 170 aa5.63□□□□□ -1.51
CCS1YMR038C RIB2Q12362 591 aaKnown RBP5.63□□□□□ -1.51
CCS1YMR038C TUB2P02557 457 aaKnown RBP5.62□□□□□ -1.51
CCS1YMR038C CDC12P32468 407 aaKnown RBP5.62□□□□□ -1.51
CCS1YMR038C HBS1P32769 611 aaKnown RBP5.62□□□□□ -1.51
CCS1YMR038C MCM6P53091 1017 aaKnown RBP5.62□□□□□ -1.51
CCS1YMR038C UTP8P53276 713 aaKnown RBP5.62□□□□□ -1.51
CCS1YMR038C YNL193WP53870 558 aa5.62□□□□□ -1.51
CCS1YMR038C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
CCS1YMR038C DUS3Q06053 668 aaKnown RBP5.62□□□□□ -1.51
CCS1YMR038C RPN7Q06103 429 aaKnown RBP5.62□□□□□ -1.51
CCS1YMR038C DFG16Q99234 619 aa5.62□□□□□ -1.51
CCS1YMR038C ECM29P38737 1868 aa5.62□□□□□ -1.51
CCS1YMR038C VMA2P16140 517 aaKnown RBP5.61□□□□□ -1.51
CCS1YMR038C AFG3P39925 761 aa5.61□□□□□ -1.51
CCS1YMR038C NOP2P40991 618 aaKnown RBP5.61□□□□□ -1.51
CCS1YMR038C HFM1P51979 1187 aa5.61□□□□□ -1.51
CCS1YMR038C UBR2Q07963 1872 aa5.61□□□□□ -1.51
CCS1YMR038C PCL8Q08966 492 aa5.61□□□□□ -1.51
CCS1YMR038C RRI2Q12348 645 aa5.61□□□□□ -1.51
CCS1YMR038C YDR034W-BQ6Q5X2 51 aa5.61□□□□□ -1.51
CCS1YMR038C STI1P15705 589 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
CCS1YMR038C PRP9P19736 530 aaKnown RBP5.6□□□□□ -1.51
CCS1YMR038C PER1P25625 357 aa5.6□□□□□ -1.51
CCS1YMR038C EUG1P32474 517 aa5.6□□□□□ -1.51
CCS1YMR038C RFC5P38251 354 aa5.6□□□□□ -1.51
CCS1YMR038C KSP1P38691 1029 aaKnown RBP5.6□□□□□ -1.51
CCS1YMR038C FUN12P39730 1002 aaKnown RBP5.6□□□□□ -1.51
CCS1YMR038C NPP2P39997 493 aa5.6□□□□□ -1.51
CCS1YMR038C ALR2P43553 858 aa5.6□□□□□ -1.51
CCS1YMR038C FOL2P51601 243 aaKnown RBP5.6□□□□□ -1.51
CCS1YMR038C UBX5Q06682 500 aa5.6□□□□□ -1.51
CCS1YMR038C YDL124WQ07551 312 aaKnown RBP5.6□□□□□ -1.51
CCS1YMR038C SPO75Q07798 868 aa5.6□□□□□ -1.51
CCS1YMR038C MDM38Q08179 573 aa5.6□□□□□ -1.51
CCS1YMR038C CDC53Q12018 815 aaKnown RBP5.6□□□□□ -1.51
CCS1YMR038C YLL058WQ12198 575 aa5.6□□□□□ -1.51
CCS1YMR038C TUS1Q06412 1307 aa5.59□□□□□ -1.51
CCS1YMR038C RPS19AP07280 144 aaKnown RBP5.59□□□□□ -1.51
CCS1YMR038C RPS19BP07281 144 aaPredicted RBP5.59□□□□□ -1.51
CCS1YMR038C AFR1P33304 620 aa5.59□□□□□ -1.51
CCS1YMR038C GIC1P38785 314 aa5.59□□□□□ -1.51
CCS1YMR038C SAH1P39954 449 aaKnown RBP5.59□□□□□ -1.51
CCS1YMR038C ERP6P53198 216 aa5.59□□□□□ -1.51
CCS1YMR038C EAF1Q06337 982 aa5.59□□□□□ -1.51
CCS1YMR038C TOR1P35169 2470 aa5.59□□□□□ -1.51
CCS1YMR038C HEM1P09950 548 aaPredicted RBP5.58□□□□□ -1.52
CCS1YMR038C SRM1P21827 482 aa5.58□□□□□ -1.52
CCS1YMR038C RGT1P32862 1170 aa5.58□□□□□ -1.52
CCS1YMR038C SEG2P34250 1132 aa5.58□□□□□ -1.52
CCS1YMR038C ECL1P48235 211 aa5.58□□□□□ -1.52
CCS1YMR038C PIP2P52960 996 aa5.58□□□□□ -1.52
CCS1YMR038C ENV11P53246 860 aa5.58□□□□□ -1.52
CCS1YMR038C NRD1P53617 575 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
CCS1YMR038C SRP1Q02821 542 aaKnown RBP5.58□□□□□ -1.52
CCS1YMR038C XYL2Q07993 356 aa5.58□□□□□ -1.52
CCS1YMR038C FLC1Q08967 793 aa5.58□□□□□ -1.52
CCS1YMR038C OSH2Q12451 1283 aa5.58□□□□□ -1.52
CCS1YMR038C CIT1P00890 479 aa5.57□□□□□ -1.52
CCS1YMR038C KRS1P15180 591 aaKnown RBP5.57□□□□□ -1.52
CCS1YMR038C HSP60P19882 572 aaKnown RBP5.57□□□□□ -1.52
CCS1YMR038C NPP1P25353 742 aa5.57□□□□□ -1.52
CCS1YMR038C ARE1P25628 610 aa5.57□□□□□ -1.52
CCS1YMR038C AAR2P32357 355 aaPredicted RBP5.57□□□□□ -1.52
CCS1YMR038C SRP40P32583 406 aaPredicted RBP5.57□□□□□ -1.52
CCS1YMR038C GRX7P38068 203 aa5.57□□□□□ -1.52
CCS1YMR038C TOM71P38825 639 aaKnown RBP5.57□□□□□ -1.52
CCS1YMR038C RSP5P39940 809 aaKnown RBP5.57□□□□□ -1.52
CCS1YMR038C JHD1P40034 492 aa5.57□□□□□ -1.52
CCS1YMR038C RSC8P43609 557 aaKnown RBP5.57□□□□□ -1.52
CCS1YMR038C YGR125WP53273 1036 aa5.57□□□□□ -1.52
CCS1YMR038C BUL2Q03758 920 aaKnown RBP5.57□□□□□ -1.52
CCS1YMR038C SIZ1Q04195 904 aa5.57□□□□□ -1.52
CCS1YMR038C CYC1P00044 109 aaPredicted RBP5.56□□□□□ -1.52
CCS1YMR038C DAL5P15365 543 aa5.56□□□□□ -1.52
CCS1YMR038C APL1P27351 700 aa5.56□□□□□ -1.52
CCS1YMR038C BCS1P32839 456 aa5.56□□□□□ -1.52
CCS1YMR038C TSA1P34760 196 aaKnown RBP5.56□□□□□ -1.52
CCS1YMR038C CST26P38226 397 aa5.56□□□□□ -1.52
CCS1YMR038C SIT1P39980 628 aa5.56□□□□□ -1.52
CCS1YMR038C VPS27P40343 622 aaKnown RBP5.56□□□□□ -1.52
CCS1YMR038C RPN4Q03465 531 aa5.56□□□□□ -1.52
CCS1YMR038C RSM24Q03976 319 aa5.56□□□□□ -1.52
CCS1YMR038C DUS4Q06063 367 aa5.56□□□□□ -1.52
CCS1YMR038C KEL3Q08979 651 aaPredicted RBP5.56□□□□□ -1.52
CCS1YMR038C YDR524C-BQ3E6R4 66 aa5.56□□□□□ -1.52
CCS1YMR038C HBN1Q96VH4 193 aa5.56□□□□□ -1.52
CCS1YMR038C RPP0P05317 312 aaKnown RBP5.55□□□□□ -1.52
CCS1YMR038C PIF1P07271 859 aa5.55□□□□□ -1.52
CCS1YMR038C YKL091CP33324 310 aaKnown RBP5.55□□□□□ -1.52
CCS1YMR038C YKR018CP36114 725 aa5.55□□□□□ -1.52
CCS1YMR038C KTR3P38130 404 aaPredicted RBP5.55□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms