RNA–Protein interactions for RNA: YML042W

CAT2, Transcript of Carnitine acetyl-CoA transferase, yeast

Gene CAT2, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAT2	YML042W	YKE2	P52553	114 aa		2.27	□□□□□ -2.05
CAT2	YML042W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	2.27	□□□□□ -2.05	not detected
CAT2	YML042W	MTQ2	Q03920	221 aa	Predicted RBP	2.27	□□□□□ -2.05
CAT2	YML042W	TMA10	Q06177	86 aa		2.27	□□□□□ -2.05
CAT2	YML042W	AIM39	Q08223	395 aa		2.27	□□□□□ -2.05
CAT2	YML042W	NOT3	P06102	836 aa	Known RBP	2.26	□□□□□ -2.05
CAT2	YML042W	CDC31	P06704	161 aa	Known RBP	2.26	□□□□□ -2.05
CAT2	YML042W	PFK1	P16861	987 aa	Known RBP	2.26	□□□□□ -2.05
CAT2	YML042W	VBA3	P25594	458 aa		2.26	□□□□□ -2.05
CAT2	YML042W	NGG1	P32494	702 aa		2.26	□□□□□ -2.05
CAT2	YML042W	STE13	P33894	931 aa		2.26	□□□□□ -2.05
CAT2	YML042W	NIC96	P34077	839 aa		2.26	□□□□□ -2.05
CAT2	YML042W	PTH2	P34222	208 aa		2.26	□□□□□ -2.05
CAT2	YML042W	JNM1	P36224	373 aa		2.26	□□□□□ -2.05
CAT2	YML042W	KTR4	P38131	464 aa		2.26	□□□□□ -2.05
CAT2	YML042W	MUM2	P38236	366 aa		2.26	□□□□□ -2.05
CAT2	YML042W	YHL041W	P38730	149 aa		2.26	□□□□□ -2.05
CAT2	YML042W	DSS1	P39112	969 aa		2.26	□□□□□ -2.05
CAT2	YML042W	MNT3	P40549	630 aa		2.26	□□□□□ -2.05
CAT2	YML042W	RSC8	P43609	557 aa	Known RBP	2.26	□□□□□ -2.05
CAT2	YML042W	SRB7	P47822	140 aa		2.26	□□□□□ -2.05
CAT2	YML042W	GCV2	P49095	1034 aa		2.26	□□□□□ -2.05
CAT2	YML042W	DAM1	P53267	343 aa		2.26	□□□□□ -2.05
CAT2	YML042W	HFD1	Q04458	532 aa		2.26	□□□□□ -2.05
CAT2	YML042W	VIP1	Q06685	1146 aa	Known RBP	2.26	□□□□□ -2.05
CAT2	YML042W	REH1	Q06709	432 aa		2.26	□□□□□ -2.05
CAT2	YML042W	GRC3	Q07845	632 aa		2.26	□□□□□ -2.05
CAT2	YML042W	PSR2	Q07949	397 aa		2.26	□□□□□ -2.05
CAT2	YML042W	SSP2	Q08646	371 aa		2.26	□□□□□ -2.05
CAT2	YML042W	PNS1	Q12412	539 aa		2.26	□□□□□ -2.05
CAT2	YML042W	HBN1	Q96VH4	193 aa		2.26	□□□□□ -2.05
CAT2	YML042W	RPS9A	O13516	197 aa	Known RBP	2.25	□□□□□ -2.05
CAT2	YML042W	PMA1	P05030	918 aa	Known RBP	2.25	□□□□□ -2.05
CAT2	YML042W	HOM3	P10869	527 aa		2.25	□□□□□ -2.05
CAT2	YML042W	MCM10	P32354	571 aa		2.25	□□□□□ -2.05
CAT2	YML042W	HBS1	P32769	611 aa	Known RBP	2.25	□□□□□ -2.05
CAT2	YML042W	TYE7	P33122	291 aa	Predicted RBP	2.25	□□□□□ -2.05
CAT2	YML042W	PET10	P36139	283 aa		2.25	□□□□□ -2.05
CAT2	YML042W	GPP2	P40106	250 aa	Known RBP	2.25	□□□□□ -2.05
CAT2	YML042W	ESL1	P40456	1118 aa		2.25	□□□□□ -2.05
CAT2	YML042W	NOG2	P53742	486 aa	Known RBP	2.25	□□□□□ -2.05
CAT2	YML042W	SFB2	P53953	876 aa		2.25	□□□□□ -2.05
CAT2	YML042W	YDR056C	Q12025	205 aa		2.25	□□□□□ -2.05
CAT2	YML042W	NTO1	Q12311	748 aa		2.25	□□□□□ -2.05
CAT2	YML042W	NPC2	Q12408	173 aa		2.25	□□□□□ -2.05
CAT2	YML042W	KCC4	P25389	1037 aa		2.25	□□□□□ -2.05
CAT2	YML042W	RKM3	P38222	552 aa		2.25	□□□□□ -2.05
CAT2	YML042W	RIM4	P38741	713 aa		2.25	□□□□□ -2.05
CAT2	YML042W	MSE1	P48525	536 aa		2.25	□□□□□ -2.05
CAT2	YML042W	EXG2	P52911	562 aa		2.25	□□□□□ -2.05
CAT2	YML042W	NCS6	P53088	359 aa		2.25	□□□□□ -2.05
CAT2	YML042W	MET13	P53128	600 aa		2.25	□□□□□ -2.05
CAT2	YML042W	PUS2	P53167	370 aa		2.25	□□□□□ -2.05
CAT2	YML042W	RSC1	P53236	928 aa		2.25	□□□□□ -2.05
CAT2	YML042W	SNP1	Q00916	300 aa	Predicted RBP	2.25	□□□□□ -2.05
CAT2	YML042W	MLC2	Q06580	163 aa		2.25	□□□□□ -2.05
CAT2	YML042W	TSR2	Q06672	205 aa	Known RBP	2.25	□□□□□ -2.05
CAT2	YML042W	TOM70	P07213	617 aa	Known RBP	2.24	□□□□□ -2.05
CAT2	YML042W	PCL2	P25693	308 aa		2.24	□□□□□ -2.05
CAT2	YML042W	CHS3	P29465	1165 aa		2.24	□□□□□ -2.05
CAT2	YML042W	RRN3	P36070	627 aa		2.24	□□□□□ -2.05
CAT2	YML042W	TOK1	P40310	691 aa		2.24	□□□□□ -2.05
CAT2	YML042W	HIS6	P40545	261 aa		2.24	□□□□□ -2.05
CAT2	YML042W	SAP185	P40856	1058 aa		2.24	□□□□□ -2.05
CAT2	YML042W	DUG1	P43616	481 aa	Known RBP	2.24	□□□□□ -2.05
CAT2	YML042W	NIT2	P47016	307 aa		2.24	□□□□□ -2.05
CAT2	YML042W	YJR096W	P47137	282 aa		2.24	□□□□□ -2.05
CAT2	YML042W	NPY1	P53164	384 aa		2.24	□□□□□ -2.05
CAT2	YML042W	BUL2	Q03758	920 aa	Known RBP	2.24	□□□□□ -2.05
CAT2	YML042W	SXM1	Q04175	944 aa	Known RBP	2.24	□□□□□ -2.05
CAT2	YML042W	NEW1	Q08972	1196 aa	Known RBP	2.24	□□□□□ -2.05
CAT2	YML042W	UPC2	Q12151	913 aa		2.24	□□□□□ -2.05
CAT2	YML042W	MED1	Q12321	566 aa		2.24	□□□□□ -2.05
CAT2	YML042W	YPR071W	Q12346	211 aa		2.24	□□□□□ -2.05
CAT2	YML042W	KCS1	Q12494	1050 aa		2.24	□□□□□ -2.05
CAT2	YML042W	CDC9	P04819	755 aa		2.24	□□□□□ -2.05
CAT2	YML042W	SRD1	P09007	221 aa		2.24	□□□□□ -2.05
CAT2	YML042W	AEP2	P22136	580 aa		2.24	□□□□□ -2.05
CAT2	YML042W	URA1	P28272	314 aa	Predicted RBP	2.24	□□□□□ -2.05
CAT2	YML042W	IMP2'	P32351	346 aa		2.24	□□□□□ -2.05
CAT2	YML042W	DAL3	P32459	195 aa		2.24	□□□□□ -2.05
CAT2	YML042W	ECM32	P32644	1121 aa	Known RBP	2.24	□□□□□ -2.05
CAT2	YML042W	DEF1	P35732	738 aa	Known RBP	2.24	□□□□□ -2.05
CAT2	YML042W	YPT53	P36019	220 aa		2.24	□□□□□ -2.05
CAT2	YML042W	YKL133C	P36066	463 aa		2.24	□□□□□ -2.05
CAT2	YML042W	YBR284W	P38150	797 aa		2.24	□□□□□ -2.05
CAT2	YML042W	PES4	P39684	611 aa		2.24	□□□□□ -2.05
CAT2	YML042W	ACA1	P39970	489 aa		2.24	□□□□□ -2.05
CAT2	YML042W	YIL108W	P40483	696 aa	Known RBP	2.24	□□□□□ -2.05
CAT2	YML042W	ERR3	P42222	437 aa		2.24	□□□□□ -2.05
CAT2	YML042W	VTC2	P43585	828 aa		2.24	□□□□□ -2.05
CAT2	YML042W	UBP6	P43593	499 aa	Known RBP	2.24	□□□□□ -2.05
CAT2	YML042W	YKR011C	Q02209	353 aa		2.24	□□□□□ -2.05
CAT2	YML042W	IRC3	Q06683	689 aa		2.24	□□□□□ -2.05
CAT2	YML042W	PSR1	Q07800	427 aa		2.24	□□□□□ -2.05
CAT2	YML042W	PUS9	Q12069	462 aa		2.24	□□□□□ -2.05
CAT2	YML042W	SWM1	Q12379	170 aa		2.24	□□□□□ -2.05
CAT2	YML042W	MSS18	P08593	268 aa		2.23	□□□□□ -2.05
CAT2	YML042W	RAD18	P10862	487 aa		2.23	□□□□□ -2.05
CAT2	YML042W	SFL1	P20134	766 aa		2.23	□□□□□ -2.05

Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms