RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF1YLR399C VID30P53076 958 aa12.91□□□□□ -0.34
BDF1YLR399C BNI5P53890 448 aaKnown RBP12.91□□□□□ -0.34
BDF1YLR399C RSM24Q03976 319 aa12.91□□□□□ -0.34
BDF1YLR399C YLH47Q06493 454 aa12.91□□□□□ -0.34
BDF1YLR399C ARR1Q06596 294 aa12.91□□□□□ -0.34
BDF1YLR399C DSE3Q08729 430 aa12.91□□□□□ -0.34
BDF1YLR399C TCO89Q08921 799 aa12.91□□□□□ -0.34
BDF1YLR399C DBP10Q12389 995 aaKnown RBP12.91□□□□□ -0.34
BDF1YLR399C RAD61Q99359 647 aa12.91□□□□□ -0.34
BDF1YLR399C TRM2P33753 639 aa12.9□□□□□ -0.34
BDF1YLR399C YHL008CP38750 627 aa12.9□□□□□ -0.34
BDF1YLR399C ORC6P38826 435 aa12.9□□□□□ -0.34
BDF1YLR399C DPH1P40487 425 aaKnown RBP12.9□□□□□ -0.34
BDF1YLR399C NOP9P47077 666 aaKnown RBP12.9□□□□□ -0.34
BDF1YLR399C MSN5P52918 1224 aa12.9□□□□□ -0.34
BDF1YLR399C NBP1P52919 319 aaPredicted RBP12.9□□□□□ -0.34
BDF1YLR399C RPL22BP56628 122 aaKnown RBP12.9□□□□□ -0.34
BDF1YLR399C SUP45P12385 437 aaKnown RBP12.9□□□□□ -0.34
BDF1YLR399C RPL8BP29453 256 aaKnown RBP12.9□□□□□ -0.34
BDF1YLR399C PSY2P40164 858 aa12.9□□□□□ -0.34
BDF1YLR399C PFK26P40433 827 aaKnown RBP12.9□□□□□ -0.34
BDF1YLR399C UBP15P50101 1230 aa12.9□□□□□ -0.34
BDF1YLR399C MDM20Q12387 796 aaKnown RBP12.9□□□□□ -0.34
BDF1YLR399C GCR1P07261 785 aa12.89□□□□□ -0.35
BDF1YLR399C SEC63P14906 663 aa12.89□□□□□ -0.35
BDF1YLR399C VMA2P16140 517 aaKnown RBP12.89□□□□□ -0.35
BDF1YLR399C GRX1P25373 110 aaKnown RBP12.89□□□□□ -0.35
BDF1YLR399C PTH2P34222 208 aa12.89□□□□□ -0.35
BDF1YLR399C YKR015CP36111 568 aa12.89□□□□□ -0.35
BDF1YLR399C TRM5P38793 499 aa12.89□□□□□ -0.35
BDF1YLR399C CCT3P39077 534 aaKnown RBP12.89□□□□□ -0.35
BDF1YLR399C CSM3Q04659 317 aa12.89□□□□□ -0.35
BDF1YLR399C YDL057WQ07379 328 aa12.89□□□□□ -0.35
BDF1YLR399C MPH2P0CD99 609 aa12.89□□□□□ -0.35
BDF1YLR399C NPP1P25353 742 aa12.89□□□□□ -0.35
BDF1YLR399C CAP1P28495 268 aaKnown RBP12.89□□□□□ -0.35
BDF1YLR399C KIP2P28743 706 aa12.89□□□□□ -0.35
BDF1YLR399C ARB1P40024 610 aaKnown RBP12.89□□□□□ -0.35
BDF1YLR399C SPO71Q03868 1245 aa12.89□□□□□ -0.35
BDF1YLR399C YLR297WQ05899 129 aa12.89□□□□□ -0.35
BDF1YLR399C TY1B-AO13527 1196 aaKnown RBP12.88□□□□□ -0.35
BDF1YLR399C CMD1P06787 147 aaKnown RBP12.88□□□□□ -0.35
BDF1YLR399C MDL2P33311 773 aa12.88□□□□□ -0.35
BDF1YLR399C PAM1P37304 830 aaKnown RBP12.88□□□□□ -0.35
BDF1YLR399C ETP1P38748 585 aaKnown RBP12.88□□□□□ -0.35
BDF1YLR399C FMN1Q03778 218 aa12.88□□□□□ -0.35
BDF1YLR399C PLP1Q04004 230 aa12.88□□□□□ -0.35
BDF1YLR399C YML082WQ04533 649 aaKnown RBP12.88□□□□□ -0.35
BDF1YLR399C VHS3Q08438 674 aa12.88□□□□□ -0.35
BDF1YLR399C ACE2P21192 770 aa12.87□□□□□ -0.35
BDF1YLR399C HEM3P28789 327 aa12.87□□□□□ -0.35
BDF1YLR399C NUP120P35729 1037 aa12.87□□□□□ -0.35
BDF1YLR399C DBP7P36120 742 aaKnown RBP12.87□□□□□ -0.35
BDF1YLR399C ALA1P40825 983 aaKnown RBP12.87□□□□□ -0.35
BDF1YLR399C GSY1P23337 708 aa12.87□□□□□ -0.35
BDF1YLR399C MEF1P25039 761 aa12.87□□□□□ -0.35
BDF1YLR399C SLM4P38247 162 aa12.87□□□□□ -0.35
BDF1YLR399C SPC97P38863 823 aa12.87□□□□□ -0.35
BDF1YLR399C SPC72P39723 622 aa12.87□□□□□ -0.35
BDF1YLR399C SHE4P51534 789 aa12.87□□□□□ -0.35
BDF1YLR399C DCP2P53550 970 aaKnown RBP12.87□□□□□ -0.35
BDF1YLR399C YDR476CQ03362 224 aa12.87□□□□□ -0.35
BDF1YLR399C AAD3P25612 363 aa12.86□□□□□ -0.35
BDF1YLR399C CCL1P37366 393 aa12.86□□□□□ -0.35
BDF1YLR399C IRR1P40541 1150 aa12.86□□□□□ -0.35
BDF1YLR399C YMR027WQ04371 470 aa12.86□□□□□ -0.35
BDF1YLR399C MGR3Q04472 501 aa12.86□□□□□ -0.35
BDF1YLR399C AIM33Q04516 312 aa12.86□□□□□ -0.35
BDF1YLR399C PEX2P32800 271 aa12.85□□□□□ -0.35
BDF1YLR399C COY1P34237 679 aa12.85□□□□□ -0.35
BDF1YLR399C NCL1P38205 684 aaKnown RBP12.85□□□□□ -0.35
BDF1YLR399C EXO5P38289 585 aa12.85□□□□□ -0.35
BDF1YLR399C CAB2P40506 365 aa12.85□□□□□ -0.35
BDF1YLR399C SYG1P40528 902 aa12.85□□□□□ -0.35
BDF1YLR399C DIA2Q08496 732 aaPredicted RBP12.85□□□□□ -0.35
BDF1YLR399C RRD2Q12461 358 aa12.85□□□□□ -0.35
BDF1YLR399C CLB2P24869 491 aa12.85□□□□□ -0.35
BDF1YLR399C RRT12P25381 491 aa12.85□□□□□ -0.35
BDF1YLR399C DGR2P32330 852 aa12.85□□□□□ -0.35
BDF1YLR399C DIA4P38705 446 aaPredicted RBP12.85□□□□□ -0.35
BDF1YLR399C BRL1P38770 471 aa12.85□□□□□ -0.35
BDF1YLR399C DIM1P41819 318 aaKnown RBP12.85□□□□□ -0.35
BDF1YLR399C MIG2P53035 382 aa12.85□□□□□ -0.35
BDF1YLR399C RIX7Q07844 837 aaKnown RBP12.85□□□□□ -0.35
BDF1YLR399C RPN8Q08723 338 aaKnown RBP12.85□□□□□ -0.35
BDF1YLR399C MED1Q12321 566 aa12.85□□□□□ -0.35
BDF1YLR399C PGK1P00560 416 aaKnown RBP12.84□□□□□ -0.35
BDF1YLR399C RRN6P32786 894 aa12.84□□□□□ -0.35
BDF1YLR399C TRZ1P36159 838 aaPredicted RBP12.84□□□□□ -0.35
BDF1YLR399C DAN4P47179 1161 aa12.84□□□□□ -0.35
BDF1YLR399C RFX1P48743 811 aa12.84□□□□□ -0.35
BDF1YLR399C TMA20P89886 181 aaPredicted RBP12.84□□□□□ -0.35
BDF1YLR399C UBP3Q01477 912 aaKnown RBP RIP-Chip data12.84□□□□□ -0.35not detected
BDF1YLR399C ADY3Q07732 790 aa12.84□□□□□ -0.35
BDF1YLR399C YML002WP0CF17 737 aa12.84□□□□□ -0.35
BDF1YLR399C EXO70P19658 623 aa12.84□□□□□ -0.35
BDF1YLR399C MCM5P29496 775 aaKnown RBP12.84□□□□□ -0.35
BDF1YLR399C TPS2P31688 896 aaKnown RBP12.84□□□□□ -0.35
BDF1YLR399C SPT16P32558 1035 aaKnown RBP12.84□□□□□ -0.35
BDF1YLR399C PEX18P38855 283 aa12.84□□□□□ -0.35
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms