RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C YBP2P53169 641 aa6.4□□□□□ -1.38
SED5YLR026C GAD1Q04792 585 aa6.4□□□□□ -1.38
SED5YLR026C HBT1Q07653 1046 aaKnown RBP6.4□□□□□ -1.38
SED5YLR026C SPC42P36094 363 aa6.39□□□□□ -1.39
SED5YLR026C BCD1P38772 366 aa6.39□□□□□ -1.39
SED5YLR026C PCL5P38794 229 aa6.39□□□□□ -1.39
SED5YLR026C IRC10Q08118 586 aa6.39□□□□□ -1.39
SED5YLR026C SRD1P09007 221 aa6.38□□□□□ -1.39
SED5YLR026C ADE2P21264 571 aaKnown RBP6.38□□□□□ -1.39
SED5YLR026C MIH1P23748 554 aa6.38□□□□□ -1.39
SED5YLR026C PEX6P33760 1030 aa6.38□□□□□ -1.39
SED5YLR026C YKR051WP36142 418 aa6.38□□□□□ -1.39
SED5YLR026C ORC4P54791 529 aa6.38□□□□□ -1.39
SED5YLR026C YTA7P40340 1379 aa6.37□□□□□ -1.39
SED5YLR026C RAD18P10862 487 aa6.37□□□□□ -1.39
SED5YLR026C SDS3P40505 327 aa6.37□□□□□ -1.39
SED5YLR026C YHR112CP38716 378 aa6.36□□□□□ -1.39
SED5YLR026C STU2P46675 888 aa6.36□□□□□ -1.39
SED5YLR026C UBC9P50623 157 aaPredicted RBP6.36□□□□□ -1.39
SED5YLR026C UBC11P52492 156 aa6.36□□□□□ -1.39
SED5YLR026C MTL1P53214 551 aa6.36□□□□□ -1.39
SED5YLR026C NHX1Q04121 633 aa6.36□□□□□ -1.39
SED5YLR026C RPN7Q06103 429 aaKnown RBP6.36□□□□□ -1.39
SED5YLR026C ATG11Q12527 1178 aa6.36□□□□□ -1.39
SED5YLR026C HOG1P32485 435 aa6.35□□□□□ -1.39
SED5YLR026C MIP6P38760 659 aaKnown RBP6.35□□□□□ -1.39
SED5YLR026C BAP3P41815 604 aa6.35□□□□□ -1.39
SED5YLR026C QRI1P43123 477 aaKnown RBP6.35□□□□□ -1.39
SED5YLR026C OSW7P43611 510 aa6.35□□□□□ -1.39
SED5YLR026C RIA1P53893 1110 aa6.35□□□□□ -1.39
SED5YLR026C UGO1Q03327 502 aa6.35□□□□□ -1.39
SED5YLR026C GIS1Q03833 894 aa6.35□□□□□ -1.39
SED5YLR026C NTG2Q08214 380 aa6.35□□□□□ -1.39
SED5YLR026C MRH1Q12117 320 aaPredicted RBP6.35□□□□□ -1.39
SED5YLR026C HSL7P38274 827 aa6.34□□□□□ -1.39
SED5YLR026C ECM1P39715 212 aa6.34□□□□□ -1.39
SED5YLR026C FMP52P40008 231 aa6.34□□□□□ -1.39
SED5YLR026C MET6P05694 767 aaKnown RBP6.33□□□□□ -1.4
SED5YLR026C ERG6P25087 383 aaKnown RBP6.33□□□□□ -1.4
SED5YLR026C CBR1P38626 284 aaKnown RBP6.33□□□□□ -1.4
SED5YLR026C LYS9P38999 446 aa6.33□□□□□ -1.4
SED5YLR026C ARG5,6Q01217 863 aa6.33□□□□□ -1.4
SED5YLR026C SGO1Q08490 590 aa6.33□□□□□ -1.4
SED5YLR026C HIR1P32479 840 aa6.32□□□□□ -1.4
SED5YLR026C APL2P36000 726 aaPredicted RBP6.32□□□□□ -1.4
SED5YLR026C AIM14P53109 570 aa6.32□□□□□ -1.4
SED5YLR026C CTK1Q03957 528 aaKnown RBP6.32□□□□□ -1.4
SED5YLR026C POB3Q04636 552 aaKnown RBP6.32□□□□□ -1.4
SED5YLR026C RGC1Q06108 1083 aaKnown RBP6.32□□□□□ -1.4
SED5YLR026C TRZ1P36159 838 aaPredicted RBP6.31□□□□□ -1.4
SED5YLR026C FMO1P38866 432 aa6.31□□□□□ -1.4
SED5YLR026C TEL2P53038 688 aa6.31□□□□□ -1.4
SED5YLR026C HRP1Q99383 534 aaKnown RBP6.31□□□□□ -1.4
SED5YLR026C PCL2P25693 308 aa6.3□□□□□ -1.4
SED5YLR026C MVD1P32377 396 aaKnown RBP6.3□□□□□ -1.4
SED5YLR026C CCT3P39077 534 aaKnown RBP6.3□□□□□ -1.4
SED5YLR026C DOT6P40059 670 aaKnown RBP6.3□□□□□ -1.4
SED5YLR026C ARP4P80428 489 aa6.3□□□□□ -1.4
SED5YLR026C LEE1Q02799 301 aaKnown RBP6.3□□□□□ -1.4
SED5YLR026C HMG1P12683 1054 aa6.29□□□□□ -1.4
SED5YLR026C YKR018CP36114 725 aa6.29□□□□□ -1.4
SED5YLR026C SFB3P38810 929 aa6.29□□□□□ -1.4
SED5YLR026C REV7P38927 245 aa6.29□□□□□ -1.4
SED5YLR026C PAN2P53010 1115 aaPredicted RBP6.29□□□□□ -1.4
SED5YLR026C PCL10P53124 433 aa6.29□□□□□ -1.4
SED5YLR026C SSL2Q00578 843 aa6.29□□□□□ -1.4
SED5YLR026C FPR4Q06205 392 aaPredicted RBP6.29□□□□□ -1.4
SED5YLR026C ATG33Q06485 197 aa6.29□□□□□ -1.4
SED5YLR026C MCM21Q06675 368 aa6.29□□□□□ -1.4
SED5YLR026C APT2P36973 181 aa6.28□□□□□ -1.4
SED5YLR026C TDP1P38319 544 aa6.27□□□□□ -1.41
SED5YLR026C HRB1P38922 454 aaKnown RBP RIP-Chip data6.27□□□□□ -1.41not detected
SED5YLR026C NUP60P39705 539 aa6.27□□□□□ -1.41
SED5YLR026C RNH70P53331 553 aa6.27□□□□□ -1.41
SED5YLR026C MSL5Q12186 476 aaKnown RBP RIP-Chip data6.27□□□□□ -1.41not detected
SED5YLR026C SUT2Q12286 268 aa6.27□□□□□ -1.41
SED5YLR026C YKL033W-AQ86ZR7 236 aa6.27□□□□□ -1.41
SED5YLR026C SFL1P20134 766 aa6.26□□□□□ -1.41
SED5YLR026C RNR1P21524 888 aaKnown RBP6.26□□□□□ -1.41
SED5YLR026C KIN3P22209 435 aa6.26□□□□□ -1.41
SED5YLR026C PPG1P32838 368 aa6.26□□□□□ -1.41
SED5YLR026C MNN4P36044 1178 aa6.26□□□□□ -1.41
SED5YLR026C PCM1P38628 557 aaKnown RBP6.26□□□□□ -1.41
SED5YLR026C GET2P40056 285 aa6.26□□□□□ -1.41
SED5YLR026C TFB2Q02939 513 aa6.26□□□□□ -1.41
SED5YLR026C GIN4Q12263 1142 aa6.26□□□□□ -1.41
SED5YLR026C SIR3P06701 978 aa6.25□□□□□ -1.41
SED5YLR026C CDC43P18898 376 aa6.25□□□□□ -1.41
SED5YLR026C YNL195CP40168 261 aa6.25□□□□□ -1.41
SED5YLR026C COX18P53239 316 aa6.25□□□□□ -1.41
SED5YLR026C ALG12P53730 551 aa6.25□□□□□ -1.41
SED5YLR026C SMX3P54999 86 aaPredicted RBP6.25□□□□□ -1.41
SED5YLR026C REC102Q02721 264 aa6.25□□□□□ -1.41
SED5YLR026C MET13P53128 600 aa6.24□□□□□ -1.41
SED5YLR026C VPS73P53142 486 aaKnown RBP6.24□□□□□ -1.41
SED5YLR026C YAP1802P53309 568 aa6.24□□□□□ -1.41
SED5YLR026C YLR001CQ07895 862 aa6.24□□□□□ -1.41
SED5YLR026C ECM3Q99252 613 aa6.24□□□□□ -1.41
SED5YLR026C MON2P48563 1636 aaPredicted RBP6.24□□□□□ -1.41
SED5YLR026C CCR4P31384 837 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms