RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C BNI5P53890 448 aaKnown RBP2.51□□□□□ -2.01
VPS13YLL040C ROD1Q02805 837 aa2.51□□□□□ -2.01
VPS13YLL040C ESF1Q06344 628 aaKnown RBP2.51□□□□□ -2.01
VPS13YLL040C THI3Q07471 609 aa2.51□□□□□ -2.01
VPS13YLL040C AFT2Q08957 416 aa2.51□□□□□ -2.01
VPS13YLL040C YPT6Q99260 215 aa2.51□□□□□ -2.01
VPS13YLL040C COBP00163 385 aa2.51□□□□□ -2.01
VPS13YLL040C RGP1P16664 663 aa2.51□□□□□ -2.01
VPS13YLL040C DBP7P36120 742 aaKnown RBP2.51□□□□□ -2.01
VPS13YLL040C RIM8P53179 542 aa2.51□□□□□ -2.01
VPS13YLL040C ORM2Q06144 216 aa2.51□□□□□ -2.01
VPS13YLL040C OCA6Q12454 224 aa2.51□□□□□ -2.01
VPS13YLL040C MRPL25P23369 157 aa2.5□□□□□ -2.01
VPS13YLL040C TFC1P32367 649 aa2.5□□□□□ -2.01
VPS13YLL040C PCA1P38360 1216 aa2.5□□□□□ -2.01
VPS13YLL040C NPR2P39923 615 aa2.5□□□□□ -2.01
VPS13YLL040C LCB2P40970 561 aa2.5□□□□□ -2.01
VPS13YLL040C GPI8P49018 411 aa2.5□□□□□ -2.01
VPS13YLL040C NOP15P53927 220 aaPredicted RBP2.5□□□□□ -2.01
VPS13YLL040C RPM2Q02773 1202 aa2.5□□□□□ -2.01
VPS13YLL040C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
VPS13YLL040C CFT2Q12102 859 aaPredicted RBP2.5□□□□□ -2.01
VPS13YLL040C RAD51P25454 400 aa2.5□□□□□ -2.01
VPS13YLL040C CST26P38226 397 aa2.5□□□□□ -2.01
VPS13YLL040C RPG1P38249 964 aaKnown RBP2.5□□□□□ -2.01
VPS13YLL040C PET130P47065 347 aa2.5□□□□□ -2.01
VPS13YLL040C TFB3Q03290 321 aa2.5□□□□□ -2.01
VPS13YLL040C PRE10P21242 288 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01 RIP-Chip
VPS13YLL040C DAL7P21826 554 aa2.5□□□□□ -2.01
VPS13YLL040C SRM1P21827 482 aa2.5□□□□□ -2.01
VPS13YLL040C PTC4P38089 393 aa2.5□□□□□ -2.01
VPS13YLL040C INM2Q05533 292 aa2.5□□□□□ -2.01
VPS13YLL040C TLG2Q08144 397 aa2.5□□□□□ -2.01
VPS13YLL040C VIK1Q12045 647 aa2.5□□□□□ -2.01
VPS13YLL040C ILS1P09436 1072 aaKnown RBP2.5□□□□□ -2.01
VPS13YLL040C MPH2P0CD99 609 aa2.5□□□□□ -2.01
VPS13YLL040C RPL8BP29453 256 aaKnown RBP2.5□□□□□ -2.01
VPS13YLL040C SUV3P32580 737 aa2.5□□□□□ -2.01
VPS13YLL040C UTP7P40055 554 aaKnown RBP2.5□□□□□ -2.01
VPS13YLL040C LIA1P47120 325 aaKnown RBP2.5□□□□□ -2.01
VPS13YLL040C YMR1P47147 688 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
VPS13YLL040C PCL10P53124 433 aa2.5□□□□□ -2.01
VPS13YLL040C SLM2P53955 656 aa2.5□□□□□ -2.01
VPS13YLL040C ORC4P54791 529 aa2.5□□□□□ -2.01
VPS13YLL040C PRP42Q03776 544 aaKnown RBP2.5□□□□□ -2.01
VPS13YLL040C SUB2Q07478 446 aaKnown RBP2.5□□□□□ -2.01
VPS13YLL040C INO1P11986 533 aa2.5□□□□□ -2.01
VPS13YLL040C LHS1P36016 881 aa2.5□□□□□ -2.01
VPS13YLL040C BIM1P40013 344 aa2.5□□□□□ -2.01
VPS13YLL040C ALG5P40350 334 aa2.5□□□□□ -2.01
VPS13YLL040C DIA3P52290 468 aa2.5□□□□□ -2.01
VPS13YLL040C YNL040WP53960 456 aaPredicted RBP2.5□□□□□ -2.01
VPS13YLL040C MMT1Q03218 510 aa2.5□□□□□ -2.01
VPS13YLL040C SFH1Q06168 426 aa2.5□□□□□ -2.01
VPS13YLL040C CSC1Q06538 782 aa2.5□□□□□ -2.01
VPS13YLL040C SLP1Q12232 587 aa2.5□□□□□ -2.01
VPS13YLL040C ATP2P00830 511 aaKnown RBP2.5□□□□□ -2.01
VPS13YLL040C UBP13P38187 747 aa2.5□□□□□ -2.01
VPS13YLL040C RSP5P39940 809 aaKnown RBP2.5□□□□□ -2.01
VPS13YLL040C YNL320WP42840 284 aa2.5□□□□□ -2.01
VPS13YLL040C IES1P43579 692 aa2.5□□□□□ -2.01
VPS13YLL040C TRF5P48561 642 aaKnown RBP2.5□□□□□ -2.01
VPS13YLL040C RIM21P48565 533 aa2.5□□□□□ -2.01
VPS13YLL040C NBP1P52919 319 aaPredicted RBP2.5□□□□□ -2.01
VPS13YLL040C YGL108CP53139 140 aa2.5□□□□□ -2.01
VPS13YLL040C URH1Q04179 340 aa2.5□□□□□ -2.01
VPS13YLL040C YDR338CQ05497 695 aa2.5□□□□□ -2.01
VPS13YLL040C PCD1Q12524 340 aa2.5□□□□□ -2.01
VPS13YLL040C YAT2P40017 923 aa2.5□□□□□ -2.01
VPS13YLL040C CSM2P40465 213 aa2.5□□□□□ -2.01
VPS13YLL040C PTA1Q01329 785 aaPredicted RBP2.5□□□□□ -2.01
VPS13YLL040C UTP6Q02354 440 aaKnown RBP2.5□□□□□ -2.01
VPS13YLL040C USA1Q03714 838 aa2.5□□□□□ -2.01
VPS13YLL040C ERG12P07277 443 aa2.49□□□□□ -2.01
VPS13YLL040C MSR1P38714 643 aa2.49□□□□□ -2.01
VPS13YLL040C YLF2P38746 405 aa2.49□□□□□ -2.01
VPS13YLL040C YMR147WP40218 223 aaKnown RBP2.49□□□□□ -2.01
VPS13YLL040C SPO75Q07798 868 aa2.49□□□□□ -2.01
VPS13YLL040C YLR462WO13556 202 aa2.49□□□□□ -2.01
VPS13YLL040C GCY1P14065 312 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
VPS13YLL040C CSM1P25651 190 aa2.49□□□□□ -2.01
VPS13YLL040C AMN1P38285 549 aaPredicted RBP2.49□□□□□ -2.01
VPS13YLL040C YHL049CP38722 271 aa2.49□□□□□ -2.01
VPS13YLL040C YEL075CP39972 122 aa2.49□□□□□ -2.01
VPS13YLL040C YER189WP40104 122 aa2.49□□□□□ -2.01
VPS13YLL040C YJL107CP42947 387 aa2.49□□□□□ -2.01
VPS13YLL040C YFL064CP43540 174 aa2.49□□□□□ -2.01
VPS13YLL040C NUP84P52891 726 aa2.49□□□□□ -2.01
VPS13YLL040C YMR027WQ04371 470 aa2.49□□□□□ -2.01
VPS13YLL040C YLR326WQ06170 240 aaKnown RBP2.49□□□□□ -2.01
VPS13YLL040C YBL111CQ3E7Y5 667 aa2.49□□□□□ -2.01
VPS13YLL040C RAD14P28519 371 aa2.49□□□□□ -2.01
VPS13YLL040C PTK1P36002 662 aaPredicted RBP2.49□□□□□ -2.01
VPS13YLL040C LCP5P40079 357 aaPredicted RBP2.49□□□□□ -2.01
VPS13YLL040C INA22P40576 216 aa2.49□□□□□ -2.01
VPS13YLL040C JJJ2P46997 583 aa2.49□□□□□ -2.01
VPS13YLL040C VMA10P48836 114 aaKnown RBP2.49□□□□□ -2.01
VPS13YLL040C YKL222CP35995 705 aa2.49□□□□□ -2.01
VPS13YLL040C STV1P37296 890 aa2.49□□□□□ -2.01
VPS13YLL040C PCM1P38628 557 aaKnown RBP2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 41.8 ms