RNA–Protein interactions for RNA: YJR104C

SOD1, Transcript of Cytosolic copper-zinc superoxide dismutase, yeast

Gene SOD1, Length 465 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOD1	YJR104C	FAR1	P21268	830 aa		3.79	□□□□□ -1.8
SOD1	YJR104C	AFT1	P22149	690 aa		3.79	□□□□□ -1.8
SOD1	YJR104C	PDB1	P32473	366 aa	Known RBP	3.79	□□□□□ -1.8
SOD1	YJR104C	ECM4	P36156	370 aa		3.79	□□□□□ -1.8
SOD1	YJR104C	AHP1	P38013	176 aa	Known RBP	3.79	□□□□□ -1.8
SOD1	YJR104C	ATG14	P38270	344 aa		3.79	□□□□□ -1.8
SOD1	YJR104C	SAF1	P38352	637 aa		3.79	□□□□□ -1.8
SOD1	YJR104C	NUP60	P39705	539 aa		3.79	□□□□□ -1.8
SOD1	YJR104C	AIR1	P40507	360 aa	Known RBP	3.79	□□□□□ -1.8
SOD1	YJR104C	PXA1	P41909	870 aa		3.79	□□□□□ -1.8
SOD1	YJR104C	SBE2	P42223	864 aa	Known RBP	3.79	□□□□□ -1.8
SOD1	YJR104C	AAD14	P42884	376 aa		3.79	□□□□□ -1.8
SOD1	YJR104C	TRS85	P46944	698 aa		3.79	□□□□□ -1.8
SOD1	YJR104C	YGL242C	P53066	181 aa		3.79	□□□□□ -1.8
SOD1	YJR104C	SHE10	P53075	577 aa		3.79	□□□□□ -1.8
SOD1	YJR104C	YGL039W	P53183	348 aa	Known RBP	3.79	□□□□□ -1.8
SOD1	YJR104C	UFD2	P54860	961 aa		3.79	□□□□□ -1.8
SOD1	YJR104C	BET4	Q00618	327 aa		3.79	□□□□□ -1.8
SOD1	YJR104C	TRS120	Q04183	1289 aa		3.79	□□□□□ -1.8
SOD1	YJR104C	YKU80	Q04437	629 aa		3.79	□□□□□ -1.8
SOD1	YJR104C	ERB1	Q04660	807 aa	Known RBP	3.79	□□□□□ -1.8
SOD1	YJR104C	NSE3	Q05541	303 aa		3.79	□□□□□ -1.8
SOD1	YJR104C	ATG26	Q06321	1198 aa		3.79	□□□□□ -1.8
SOD1	YJR104C	YPQ2	Q06328	317 aa		3.79	□□□□□ -1.8
SOD1	YJR104C	SPN1	Q06505	410 aa	Predicted RBP	3.79	□□□□□ -1.8
SOD1	YJR104C	RRP9	Q06506	573 aa	Known RBP	3.79	□□□□□ -1.8
SOD1	YJR104C	SDH5	Q08230	162 aa		3.79	□□□□□ -1.8
SOD1	YJR104C	RRD2	Q12461	358 aa		3.79	□□□□□ -1.8
SOD1	YJR104C	BEM2	P39960	2167 aa	Known RBP	3.79	□□□□□ -1.8
SOD1	YJR104C	JIP3	O13555	125 aa		3.78	□□□□□ -1.8
SOD1	YJR104C	HOM2	P13663	365 aa	Known RBP	3.78	□□□□□ -1.8
SOD1	YJR104C	SNA3	P14359	133 aa		3.78	□□□□□ -1.8
SOD1	YJR104C	APE1	P14904	514 aa		3.78	□□□□□ -1.8
SOD1	YJR104C	RPB10	P22139	70 aa		3.78	□□□□□ -1.8
SOD1	YJR104C	DBP2	P24783	546 aa	Known RBP	3.78	□□□□□ -1.8
SOD1	YJR104C	RPC19	P28000	142 aa	Known RBP	3.78	□□□□□ -1.8
SOD1	YJR104C	HIR2	P32480	875 aa		3.78	□□□□□ -1.8
SOD1	YJR104C	ECM32	P32644	1121 aa	Known RBP	3.78	□□□□□ -1.8
SOD1	YJR104C	PRX1	P34227	261 aa	Known RBP	3.78	□□□□□ -1.8
SOD1	YJR104C	HSM3	P38348	480 aa		3.78	□□□□□ -1.8
SOD1	YJR104C	RRM3	P38766	723 aa		3.78	□□□□□ -1.8
SOD1	YJR104C	PIH1	P38768	344 aa		3.78	□□□□□ -1.8
SOD1	YJR104C	RGA1	P39083	1007 aa		3.78	□□□□□ -1.8
SOD1	YJR104C	ARB1	P40024	610 aa	Known RBP	3.78	□□□□□ -1.8
SOD1	YJR104C	ALD5	P40047	520 aa	Known RBP	3.78	□□□□□ -1.8
SOD1	YJR104C	MRX1	P40050	688 aa		3.78	□□□□□ -1.8
SOD1	YJR104C	YER158C	P40095	573 aa		3.78	□□□□□ -1.8
SOD1	YJR104C	SYG1	P40528	902 aa		3.78	□□□□□ -1.8
SOD1	YJR104C	GVP36	P40531	326 aa	Known RBP	3.78	□□□□□ -1.8
SOD1	YJR104C	INP51	P40559	946 aa	Known RBP	3.78	□□□□□ -1.8
SOD1	YJR104C	ZAP1	P47043	880 aa		3.78	□□□□□ -1.8
SOD1	YJR104C	YJR079W	P47126	109 aa		3.78	□□□□□ -1.8
SOD1	YJR104C	FAA4	P47912	694 aa	Known RBP	3.78	□□□□□ -1.8
SOD1	YJR104C	HXT17	P53631	564 aa		3.78	□□□□□ -1.8
SOD1	YJR104C	NSG2	P53898	299 aa		3.78	□□□□□ -1.8
SOD1	YJR104C	YAT1	P80235	687 aa		3.78	□□□□□ -1.8
SOD1	YJR104C	YML108W	Q03759	105 aa		3.78	□□□□□ -1.8
SOD1	YJR104C	POB3	Q04636	552 aa	Known RBP	3.78	□□□□□ -1.8
SOD1	YJR104C	YDR341C	Q05506	607 aa	Known RBP	3.78	□□□□□ -1.8
SOD1	YJR104C	MRD1	Q06106	887 aa	Known RBP	3.78	□□□□□ -1.8
SOD1	YJR104C	SFH1	Q06168	426 aa		3.78	□□□□□ -1.8
SOD1	YJR104C	YOR223W	Q12015	292 aa		3.78	□□□□□ -1.8
SOD1	YJR104C	IES3	Q12345	250 aa		3.78	□□□□□ -1.8
SOD1	YJR104C	WHI5	Q12416	295 aa		3.78	□□□□□ -1.8
SOD1	YJR104C	OSH2	Q12451	1283 aa		3.78	□□□□□ -1.8
SOD1	YJR104C	DDP1	Q99321	188 aa	Known RBP	3.78	□□□□□ -1.8
SOD1	YJR104C	FRT1	Q99332	602 aa		3.78	□□□□□ -1.8
SOD1	YJR104C	Q0182	Q9ZZW1	134 aa		3.78	□□□□□ -1.8
SOD1	YJR104C	HIS5	P07172	385 aa		3.77	□□□□□ -1.81
SOD1	YJR104C	VAS1	P07806	1104 aa	Known RBP	3.77	□□□□□ -1.81
SOD1	YJR104C	TPM1	P17536	199 aa	Known RBP	3.77	□□□□□ -1.81
SOD1	YJR104C	DAL7	P21826	554 aa		3.77	□□□□□ -1.81
SOD1	YJR104C	MLF3	P32047	452 aa		3.77	□□□□□ -1.81
SOD1	YJR104C	NPL6	P32832	435 aa		3.77	□□□□□ -1.81
SOD1	YJR104C	CSE1	P33307	960 aa		3.77	□□□□□ -1.81
SOD1	YJR104C	HSP78	P33416	811 aa		3.77	□□□□□ -1.81
SOD1	YJR104C	PET112	P33893	541 aa		3.77	□□□□□ -1.81
SOD1	YJR104C	PTH2	P34222	208 aa		3.77	□□□□□ -1.81
SOD1	YJR104C	KDX1	P36005	433 aa		3.77	□□□□□ -1.81
SOD1	YJR104C	AMN1	P38285	549 aa	Predicted RBP	3.77	□□□□□ -1.81
SOD1	YJR104C	SSZ1	P38788	538 aa	Known RBP	3.77	□□□□□ -1.81
SOD1	YJR104C	DYS1	P38791	387 aa		3.77	□□□□□ -1.81
SOD1	YJR104C	VID27	P40157	782 aa		3.77	□□□□□ -1.81
SOD1	YJR104C	SAP185	P40856	1058 aa		3.77	□□□□□ -1.81
SOD1	YJR104C	SEC27	P41811	889 aa	Known RBP	3.77	□□□□□ -1.81
SOD1	YJR104C	GPD2	P41911	440 aa	Known RBP	3.77	□□□□□ -1.81
SOD1	YJR104C	LSC1	P53598	329 aa	Known RBP	3.77	□□□□□ -1.81
SOD1	YJR104C	ALD6	P54115	500 aa	Known RBP	3.77	□□□□□ -1.81
SOD1	YJR104C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	3.77	□□□□□ -1.81	not detected
SOD1	YJR104C	YMR111C	Q04461	462 aa	Predicted RBP	3.77	□□□□□ -1.81
SOD1	YJR104C	YDL124W	Q07551	312 aa	Known RBP	3.77	□□□□□ -1.81
SOD1	YJR104C	RTT109	Q07794	436 aa		3.77	□□□□□ -1.81
SOD1	YJR104C	BUD7	Q08754	746 aa		3.77	□□□□□ -1.81
SOD1	YJR104C	RAD1	P06777	1100 aa		3.76	□□□□□ -1.81
SOD1	YJR104C	ADE3	P07245	946 aa	Known RBP	3.76	□□□□□ -1.81
SOD1	YJR104C	CDC16	P09798	840 aa		3.76	□□□□□ -1.81
SOD1	YJR104C	PET122	P10355	254 aa		3.76	□□□□□ -1.81
SOD1	YJR104C	ARG1	P22768	420 aa		3.76	□□□□□ -1.81
SOD1	YJR104C	FUB1	P25659	250 aa		3.76	□□□□□ -1.81
SOD1	YJR104C	SMC1	P32908	1225 aa		3.76	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 68.4 ms