RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W ERG11P10614 530 aa6.72□□□□□ -1.33
GEF1YJR040W TCP1P12612 559 aaKnown RBP6.72□□□□□ -1.33
GEF1YJR040W NAT1P12945 854 aaKnown RBP6.72□□□□□ -1.33
GEF1YJR040W PRP22P24384 1145 aaKnown RBP6.72□□□□□ -1.33
GEF1YJR040W GCG1P32656 232 aaKnown RBP6.72□□□□□ -1.33
GEF1YJR040W OAF3P36023 863 aa6.72□□□□□ -1.33
GEF1YJR040W SRL3P36167 246 aa6.72□□□□□ -1.33
GEF1YJR040W TDA3P38758 523 aa6.72□□□□□ -1.33
GEF1YJR040W BTN2P53286 410 aa6.72□□□□□ -1.33
GEF1YJR040W TOF1P53840 1238 aa6.72□□□□□ -1.33
GEF1YJR040W CUR1Q06469 252 aa6.72□□□□□ -1.33
GEF1YJR040W ALR1Q08269 859 aa6.72□□□□□ -1.33
GEF1YJR040W NOB1Q08444 459 aaKnown RBP6.72□□□□□ -1.33
GEF1YJR040W YEL076C-AP0CX16 216 aa6.71□□□□□ -1.33
GEF1YJR040W YLR464WP0CX17 216 aa6.71□□□□□ -1.33
GEF1YJR040W ISY1P21374 235 aaPredicted RBP6.71□□□□□ -1.33
GEF1YJR040W APL1P27351 700 aa6.71□□□□□ -1.33
GEF1YJR040W RAM2P29703 316 aa6.71□□□□□ -1.33
GEF1YJR040W UBC6P33296 250 aaPredicted RBP6.71□□□□□ -1.33
GEF1YJR040W TFC4P33339 1025 aa6.71□□□□□ -1.33
GEF1YJR040W STE13P33894 931 aa6.71□□□□□ -1.33
GEF1YJR040W YEL076CP39971 216 aa6.71□□□□□ -1.33
GEF1YJR040W SCS2P40075 244 aaKnown RBP6.71□□□□□ -1.33
GEF1YJR040W RPC17P47076 161 aa6.71□□□□□ -1.33
GEF1YJR040W ATG1P53104 897 aa6.71□□□□□ -1.33
GEF1YJR040W YNL247WP53852 767 aaKnown RBP6.71□□□□□ -1.33
GEF1YJR040W ATP25Q03153 612 aa6.71□□□□□ -1.33
GEF1YJR040W YPR078CQ06813 372 aa6.71□□□□□ -1.33
GEF1YJR040W RKM4Q12504 494 aa6.71□□□□□ -1.33
GEF1YJR040W CLN3P13365 580 aa6.71□□□□□ -1.34
GEF1YJR040W MET4P32389 672 aa6.71□□□□□ -1.34
GEF1YJR040W GCD6P32501 712 aaKnown RBP6.71□□□□□ -1.34
GEF1YJR040W SUM1P46676 1062 aa6.71□□□□□ -1.34
GEF1YJR040W RBL2P48606 106 aaKnown RBP6.71□□□□□ -1.34
GEF1YJR040W KAP114P53067 1004 aa6.71□□□□□ -1.34
GEF1YJR040W MDR1P53258 950 aa6.71□□□□□ -1.34
GEF1YJR040W OXP1P28273 1286 aa6.7□□□□□ -1.34
GEF1YJR040W ATO2P32907 282 aa6.7□□□□□ -1.34
GEF1YJR040W RIB7P33312 244 aa6.7□□□□□ -1.34
GEF1YJR040W PTH2P34222 208 aa6.7□□□□□ -1.34
GEF1YJR040W TVP38P36164 337 aa6.7□□□□□ -1.34
GEF1YJR040W FIS1P40515 155 aa6.7□□□□□ -1.34
GEF1YJR040W SHE4P51534 789 aa6.7□□□□□ -1.34
GEF1YJR040W PGA2P53903 129 aa6.7□□□□□ -1.34
GEF1YJR040W SUB1P54000 292 aaKnown RBP6.7□□□□□ -1.34
GEF1YJR040W ECI1Q05871 280 aa6.7□□□□□ -1.34
GEF1YJR040W PIG1Q06216 648 aa6.7□□□□□ -1.34
GEF1YJR040W MLH2Q07980 695 aa6.7□□□□□ -1.34
GEF1YJR040W RTP1Q12751 981 aa6.7□□□□□ -1.34
GEF1YJR040W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34 RIP-Chip
GEF1YJR040W SUI3P09064 285 aaKnown RBP6.7□□□□□ -1.34
GEF1YJR040W MAK16P10962 306 aaPredicted RBP6.7□□□□□ -1.34
GEF1YJR040W PCK1P10963 549 aa6.7□□□□□ -1.34
GEF1YJR040W PYC1P11154 1178 aaKnown RBP6.7□□□□□ -1.34
GEF1YJR040W CLN1P20437 546 aa6.7□□□□□ -1.34
GEF1YJR040W ESS1P22696 170 aa6.7□□□□□ -1.34
GEF1YJR040W RME1P32338 300 aaKnown RBP6.7□□□□□ -1.34
GEF1YJR040W MVD1P32377 396 aaKnown RBP6.7□□□□□ -1.34
GEF1YJR040W SHP1P34223 423 aa6.7□□□□□ -1.34
GEF1YJR040W SEG2P34250 1132 aa6.7□□□□□ -1.34
GEF1YJR040W KES1P35844 434 aaKnown RBP6.7□□□□□ -1.34
GEF1YJR040W UBP11P36026 717 aa6.7□□□□□ -1.34
GEF1YJR040W REG2P38232 338 aa6.7□□□□□ -1.34
GEF1YJR040W AMN1P38285 549 aaPredicted RBP6.7□□□□□ -1.34
GEF1YJR040W ERC1P38767 581 aa6.7□□□□□ -1.34
GEF1YJR040W BIM1P40013 344 aa6.7□□□□□ -1.34
GEF1YJR040W SEC27P41811 889 aaKnown RBP6.7□□□□□ -1.34
GEF1YJR040W SGM1P47166 707 aa6.7□□□□□ -1.34
GEF1YJR040W USA1Q03714 838 aa6.7□□□□□ -1.34
GEF1YJR040W DUS4Q06063 367 aa6.7□□□□□ -1.34
GEF1YJR040W CRD1Q07560 283 aa6.7□□□□□ -1.34
GEF1YJR040W ICL2Q12031 575 aa6.7□□□□□ -1.34
GEF1YJR040W PRP9P19736 530 aaKnown RBP6.69□□□□□ -1.34
GEF1YJR040W SQT1P35184 431 aa6.69□□□□□ -1.34
GEF1YJR040W UBP5P39944 805 aa6.69□□□□□ -1.34
GEF1YJR040W STB1P42845 420 aa6.69□□□□□ -1.34
GEF1YJR040W GUP1P53154 560 aa6.69□□□□□ -1.34
GEF1YJR040W ADE12P80210 433 aaKnown RBP6.69□□□□□ -1.34
GEF1YJR040W SLD5Q03406 294 aa6.69□□□□□ -1.34
GEF1YJR040W YML020WQ03722 664 aa6.69□□□□□ -1.34
GEF1YJR040W PNP1Q05788 311 aa6.69□□□□□ -1.34
GEF1YJR040W TAF10Q12030 206 aa6.69□□□□□ -1.34
GEF1YJR040W GLE1Q12315 538 aa6.69□□□□□ -1.34
GEF1YJR040W ENO2P00925 437 aaKnown RBP6.68□□□□□ -1.34
GEF1YJR040W ADE3P07245 946 aaKnown RBP6.68□□□□□ -1.34
GEF1YJR040W PFK1P16861 987 aaKnown RBP6.68□□□□□ -1.34
GEF1YJR040W REC107P21651 314 aa6.68□□□□□ -1.34
GEF1YJR040W VPS35P34110 944 aa6.68□□□□□ -1.34
GEF1YJR040W DBP7P36120 742 aaKnown RBP6.68□□□□□ -1.34
GEF1YJR040W BRE2P43132 505 aa6.68□□□□□ -1.34
GEF1YJR040W UBP15P50101 1230 aa6.68□□□□□ -1.34
GEF1YJR040W DUS1P53759 423 aaKnown RBP6.68□□□□□ -1.34
GEF1YJR040W VPS16Q03308 798 aa6.68□□□□□ -1.34
GEF1YJR040W NOC3Q07896 663 aaPredicted RBP6.68□□□□□ -1.34
GEF1YJR040W TRM11Q12463 433 aa6.68□□□□□ -1.34
GEF1YJR040W BAS1P22035 811 aa6.68□□□□□ -1.34
GEF1YJR040W CSE1P33307 960 aa6.68□□□□□ -1.34
GEF1YJR040W YKL023WP36103 277 aaKnown RBP6.68□□□□□ -1.34
GEF1YJR040W YEL025CP39991 1188 aa6.68□□□□□ -1.34
GEF1YJR040W NMD5P46970 1048 aa6.68□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 94.5 ms