RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C ADE13Q05911 482 aaKnown RBP3.58□□□□□ -1.84
YIR040CYIR040C DUS3Q06053 668 aaKnown RBP3.58□□□□□ -1.84
YIR040CYIR040C ORM2Q06144 216 aa3.58□□□□□ -1.84
YIR040CYIR040C DBP9Q06218 594 aaKnown RBP3.58□□□□□ -1.84
YIR040CYIR040C ARV1Q06541 321 aa3.58□□□□□ -1.84
YIR040CYIR040C PSR1Q07800 427 aa3.58□□□□□ -1.84
YIR040CYIR040C YLL058WQ12198 575 aa3.58□□□□□ -1.84
YIR040CYIR040C SGS1P35187 1447 aa3.58□□□□□ -1.84
YIR040CYIR040C HOM3P10869 527 aa3.57□□□□□ -1.84
YIR040CYIR040C PMS1P14242 873 aa3.57□□□□□ -1.84
YIR040CYIR040C NPP1P25353 742 aa3.57□□□□□ -1.84
YIR040CYIR040C AAD3P25612 363 aa3.57□□□□□ -1.84
YIR040CYIR040C DPH5P32469 300 aaPredicted RBP3.57□□□□□ -1.84
YIR040CYIR040C AFR1P33304 620 aa3.57□□□□□ -1.84
YIR040CYIR040C YKL091CP33324 310 aaKnown RBP3.57□□□□□ -1.84
YIR040CYIR040C PXA2P34230 853 aa3.57□□□□□ -1.84
YIR040CYIR040C MTC2P34246 357 aa3.57□□□□□ -1.84
YIR040CYIR040C UIP5P36137 443 aa3.57□□□□□ -1.84
YIR040CYIR040C RKM3P38222 552 aa3.57□□□□□ -1.84
YIR040CYIR040C PBY1P38254 753 aa3.57□□□□□ -1.84
YIR040CYIR040C EFM2P38347 419 aa3.57□□□□□ -1.84
YIR040CYIR040C YLF2P38746 405 aa3.57□□□□□ -1.84
YIR040CYIR040C APE4P38821 490 aa3.57□□□□□ -1.84
YIR040CYIR040C SNF7P39929 240 aaKnown RBP3.57□□□□□ -1.84
YIR040CYIR040C YER034WP40022 185 aaKnown RBP3.57□□□□□ -1.84
YIR040CYIR040C NDC80P40460 691 aa3.57□□□□□ -1.84
YIR040CYIR040C VTC2P43585 828 aa3.57□□□□□ -1.84
YIR040CYIR040C PFD1P46988 109 aa3.57□□□□□ -1.84
YIR040CYIR040C SHE4P51534 789 aa3.57□□□□□ -1.84
YIR040CYIR040C PEX14P53112 341 aa3.57□□□□□ -1.84
YIR040CYIR040C YGR021WP53212 290 aa3.57□□□□□ -1.84
YIR040CYIR040C NNT1Q05874 261 aa3.57□□□□□ -1.84
YIR040CYIR040C YDR306CQ06640 478 aa3.57□□□□□ -1.84
YIR040CYIR040C TSR2Q06672 205 aaKnown RBP3.57□□□□□ -1.84
YIR040CYIR040C SWA2Q06677 668 aa3.57□□□□□ -1.84
YIR040CYIR040C GPB1Q08886 897 aa3.57□□□□□ -1.84
YIR040CYIR040C OSW2Q12202 724 aa3.57□□□□□ -1.84
YIR040CYIR040C DBP10Q12389 995 aaKnown RBP3.57□□□□□ -1.84
YIR040CYIR040C STF1P01098 86 aa3.56□□□□□ -1.84
YIR040CYIR040C RAD3P06839 778 aa3.56□□□□□ -1.84
YIR040CYIR040C PET494P07390 489 aaPredicted RBP3.56□□□□□ -1.84
YIR040CYIR040C RED1P14291 827 aa3.56□□□□□ -1.84
YIR040CYIR040C SEN2P16658 377 aa3.56□□□□□ -1.84
YIR040CYIR040C FAR1P21268 830 aa3.56□□□□□ -1.84
YIR040CYIR040C MRPL25P23369 157 aa3.56□□□□□ -1.84
YIR040CYIR040C YCR015CP25616 317 aa3.56□□□□□ -1.84
YIR040CYIR040C NTG1P31378 399 aa3.56□□□□□ -1.84
YIR040CYIR040C FUN30P31380 1131 aa3.56□□□□□ -1.84
YIR040CYIR040C HBS1P32769 611 aaKnown RBP3.56□□□□□ -1.84
YIR040CYIR040C MRPL40P36534 297 aa3.56□□□□□ -1.84
YIR040CYIR040C ERT1P38140 529 aa3.56□□□□□ -1.84
YIR040CYIR040C ECM21P38167 1117 aaKnown RBP3.56□□□□□ -1.84
YIR040CYIR040C SLX1P38324 304 aa3.56□□□□□ -1.84
YIR040CYIR040C GIP4P39732 760 aa3.56□□□□□ -1.84
YIR040CYIR040C RAD26P40352 1085 aa3.56□□□□□ -1.84
YIR040CYIR040C MET18P40469 1032 aa3.56□□□□□ -1.84
YIR040CYIR040C MND2P40577 368 aa3.56□□□□□ -1.84
YIR040CYIR040C LAM5P43560 674 aa3.56□□□□□ -1.84
YIR040CYIR040C VPS62P53285 467 aa3.56□□□□□ -1.84
YIR040CYIR040C LSC1P53598 329 aaKnown RBP3.56□□□□□ -1.84
YIR040CYIR040C ZDS2P54786 942 aa3.56□□□□□ -1.84
YIR040CYIR040C YML119WQ03208 357 aa3.56□□□□□ -1.84
YIR040CYIR040C CLU1Q03690 1277 aaKnown RBP3.56□□□□□ -1.84
YIR040CYIR040C RAD33Q04231 177 aa3.56□□□□□ -1.84
YIR040CYIR040C VIP1Q06685 1146 aaKnown RBP3.56□□□□□ -1.84
YIR040CYIR040C CDA1Q06702 301 aa3.56□□□□□ -1.84
YIR040CYIR040C ACK1Q07622 623 aaPredicted RBP3.56□□□□□ -1.84
YIR040CYIR040C TPO1Q07824 586 aa3.56□□□□□ -1.84
YIR040CYIR040C FMP25Q08023 583 aa3.56□□□□□ -1.84
YIR040CYIR040C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.56□□□□□ -1.84not detected
YIR040CYIR040C WRS1Q12109 432 aaKnown RBP3.56□□□□□ -1.84
YIR040CYIR040C SEC15P22224 910 aa3.55□□□□□ -1.84
YIR040CYIR040C GFD2P25370 566 aaKnown RBP3.55□□□□□ -1.84
YIR040CYIR040C EMC1P25574 760 aa3.55□□□□□ -1.84
YIR040CYIR040C PGS1P25578 521 aa3.55□□□□□ -1.84
YIR040CYIR040C MRC1P25588 1096 aa3.55□□□□□ -1.84
YIR040CYIR040C SRP101P32916 621 aa3.55□□□□□ -1.84
YIR040CYIR040C DOM34P33309 386 aa3.55□□□□□ -1.84
YIR040CYIR040C APL2P36000 726 aaPredicted RBP3.55□□□□□ -1.84
YIR040CYIR040C TSL1P38427 1098 aaKnown RBP3.55□□□□□ -1.84
YIR040CYIR040C YHR020WP38708 688 aaKnown RBP3.55□□□□□ -1.84
YIR040CYIR040C BEM4P39011 633 aa3.55□□□□□ -1.84
YIR040CYIR040C ZRG8P40021 1076 aa3.55□□□□□ -1.84
YIR040CYIR040C BUD6P41697 788 aa3.55□□□□□ -1.84
YIR040CYIR040C YGR016WP53209 190 aa3.55□□□□□ -1.84
YIR040CYIR040C GIM3P53900 129 aa3.55□□□□□ -1.84
YIR040CYIR040C NOP15P53927 220 aaPredicted RBP3.55□□□□□ -1.84
YIR040CYIR040C REX2P54964 269 aaKnown RBP3.55□□□□□ -1.84
YIR040CYIR040C PTA1Q01329 785 aaPredicted RBP3.55□□□□□ -1.84
YIR040CYIR040C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
YIR040CYIR040C ADA2Q02336 434 aa3.55□□□□□ -1.84
YIR040CYIR040C RSM28Q03430 361 aa3.55□□□□□ -1.84
YIR040CYIR040C YAP6Q03935 383 aa3.55□□□□□ -1.84
YIR040CYIR040C YDR338CQ05497 695 aa3.55□□□□□ -1.84
YIR040CYIR040C SSQ1Q05931 657 aaPredicted RBP3.55□□□□□ -1.84
YIR040CYIR040C IRC3Q06683 689 aa3.55□□□□□ -1.84
YIR040CYIR040C RXT3Q07458 294 aa3.55□□□□□ -1.84
YIR040CYIR040C ADY3Q07732 790 aa3.55□□□□□ -1.84
YIR040CYIR040C CDC45Q08032 650 aa3.55□□□□□ -1.84
YIR040CYIR040C BMS1Q08965 1183 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms