RNA–Protein interactions for RNA: YIR012W

SQT1, Transcript of Protein involved in 60S ribosomal subunit assembly or modification, yeastyeast

Gene SQT1, Length 1,296 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SQT1YIR012W YTA12P40341 825 aa6.84□□□□□ -1.31
SQT1YIR012W SAP185P40856 1058 aa6.84□□□□□ -1.31
SQT1YIR012W AVT1P47082 602 aa6.84□□□□□ -1.31
SQT1YIR012W UTP6Q02354 440 aaKnown RBP6.84□□□□□ -1.31
SQT1YIR012W MTG1Q03151 367 aaPredicted RBP6.84□□□□□ -1.31
SQT1YIR012W DUS4Q06063 367 aa6.84□□□□□ -1.31
SQT1YIR012W NOC3Q07896 663 aaPredicted RBP6.84□□□□□ -1.31
SQT1YIR012W THS1P04801 734 aaKnown RBP6.83□□□□□ -1.32
SQT1YIR012W DAL2P25335 343 aa6.83□□□□□ -1.32
SQT1YIR012W PLC1P32383 869 aa6.83□□□□□ -1.32
SQT1YIR012W EUG1P32474 517 aa6.83□□□□□ -1.32
SQT1YIR012W GCD6P32501 712 aaKnown RBP6.83□□□□□ -1.32
SQT1YIR012W RRN6P32786 894 aa6.83□□□□□ -1.32
SQT1YIR012W PIN4P34217 668 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32not detected
SQT1YIR012W OAF3P36023 863 aa6.83□□□□□ -1.32
SQT1YIR012W ECM2P38241 364 aaKnown RBP6.83□□□□□ -1.32
SQT1YIR012W MED8P38304 223 aa6.83□□□□□ -1.32
SQT1YIR012W END3P39013 349 aa6.83□□□□□ -1.32
SQT1YIR012W NPP2P39997 493 aa6.83□□□□□ -1.32
SQT1YIR012W SMX2P40204 77 aaKnown RBP6.83□□□□□ -1.32
SQT1YIR012W VPS53P47061 822 aa6.83□□□□□ -1.32
SQT1YIR012W UBP15P50101 1230 aa6.83□□□□□ -1.32
SQT1YIR012W YGR111WP53265 400 aa6.83□□□□□ -1.32
SQT1YIR012W ATF2P53296 535 aa6.83□□□□□ -1.32
SQT1YIR012W USA1Q03714 838 aa6.83□□□□□ -1.32
SQT1YIR012W ATG16Q03818 150 aa6.83□□□□□ -1.32
SQT1YIR012W YDR222WQ04925 415 aa6.83□□□□□ -1.32
SQT1YIR012W SVF1Q05515 481 aa6.83□□□□□ -1.32
SQT1YIR012W PNP1Q05788 311 aa6.83□□□□□ -1.32
SQT1YIR012W SMC5Q08204 1093 aa6.83□□□□□ -1.32
SQT1YIR012W SDH5Q08230 162 aa6.83□□□□□ -1.32
SQT1YIR012W YPL225WQ08971 146 aaKnown RBP6.83□□□□□ -1.32
SQT1YIR012W ADH4P10127 382 aa6.82□□□□□ -1.32
SQT1YIR012W PRE10P21242 288 aaKnown RBP RIP-Chip data6.82□□□□□ -1.32not detected
SQT1YIR012W ILV6P25605 309 aaKnown RBP6.82□□□□□ -1.32
SQT1YIR012W DBF4P32325 704 aa6.82□□□□□ -1.32
SQT1YIR012W YME1P32795 747 aa6.82□□□□□ -1.32
SQT1YIR012W TFC4P33339 1025 aa6.82□□□□□ -1.32
SQT1YIR012W MRX3P38172 270 aa6.82□□□□□ -1.32
SQT1YIR012W YSW1P38280 609 aa6.82□□□□□ -1.32
SQT1YIR012W RGA1P39083 1007 aa6.82□□□□□ -1.32
SQT1YIR012W HMF1P40037 129 aaKnown RBP6.82□□□□□ -1.32
SQT1YIR012W CPR7P47103 393 aa6.82□□□□□ -1.32
SQT1YIR012W URB2P47108 1174 aa6.82□□□□□ -1.32
SQT1YIR012W HSH155P49955 971 aaKnown RBP6.82□□□□□ -1.32
SQT1YIR012W RTT102P53330 157 aa6.82□□□□□ -1.32
SQT1YIR012W RPL22BP56628 122 aaKnown RBP6.82□□□□□ -1.32
SQT1YIR012W PPM1Q04081 328 aa6.82□□□□□ -1.32
SQT1YIR012W PIG1Q06216 648 aa6.82□□□□□ -1.32
SQT1YIR012W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.82□□□□□ -1.32not detected
SQT1YIR012W FRA1Q07825 749 aa6.82□□□□□ -1.32
SQT1YIR012W IES4Q08561 116 aa6.82□□□□□ -1.32
SQT1YIR012W HIF1Q12373 385 aa6.82□□□□□ -1.32
SQT1YIR012W SEY1Q99287 776 aa6.82□□□□□ -1.32
SQT1YIR012W RPS3P05750 240 aaKnown RBP6.81□□□□□ -1.32
SQT1YIR012W DED1P06634 604 aaKnown RBP6.81□□□□□ -1.32
SQT1YIR012W RPB2P08518 1224 aaKnown RBP6.81□□□□□ -1.32
SQT1YIR012W PEP5P12868 1029 aa6.81□□□□□ -1.32
SQT1YIR012W KAR3P17119 729 aa6.81□□□□□ -1.32
SQT1YIR012W TKL1P23254 680 aaKnown RBP6.81□□□□□ -1.32
SQT1YIR012W CDC10P25342 322 aaKnown RBP6.81□□□□□ -1.32
SQT1YIR012W YCR051WP25631 222 aa6.81□□□□□ -1.32
SQT1YIR012W SWI3P32591 825 aa6.81□□□□□ -1.32
SQT1YIR012W YBL055CP34220 418 aaPredicted RBP6.81□□□□□ -1.32
SQT1YIR012W CSG2P35206 410 aa6.81□□□□□ -1.32
SQT1YIR012W TVP38P36164 337 aa6.81□□□□□ -1.32
SQT1YIR012W REG2P38232 338 aa6.81□□□□□ -1.32
SQT1YIR012W VAB2P40003 282 aa6.81□□□□□ -1.32
SQT1YIR012W MRX1P40050 688 aa6.81□□□□□ -1.32
SQT1YIR012W ASG1P40467 964 aa6.81□□□□□ -1.32
SQT1YIR012W PHO86P46956 311 aa6.81□□□□□ -1.32
SQT1YIR012W CPR6P53691 371 aaKnown RBP6.81□□□□□ -1.32
SQT1YIR012W RPA49Q01080 415 aaPredicted RBP6.81□□□□□ -1.32
SQT1YIR012W COQ9Q05779 260 aa6.81□□□□□ -1.32
SQT1YIR012W ERP3Q12403 225 aa6.81□□□□□ -1.32
SQT1YIR012W PRP16P15938 1071 aaPredicted RBP6.8□□□□□ -1.32
SQT1YIR012W VMA2P16140 517 aaKnown RBP6.8□□□□□ -1.32
SQT1YIR012W CDC42P19073 191 aa6.8□□□□□ -1.32
SQT1YIR012W IME1P21190 360 aa6.8□□□□□ -1.32
SQT1YIR012W RNR1P21524 888 aaKnown RBP6.8□□□□□ -1.32
SQT1YIR012W RAM1P22007 431 aa6.8□□□□□ -1.32
SQT1YIR012W PUF4P25339 888 aaKnown RBP RIP-Chip data6.8□□□□□ -1.32not detected
SQT1YIR012W LOS1P33418 1100 aaPredicted RBP6.8□□□□□ -1.32
SQT1YIR012W PBP2P38151 413 aaKnown RBP RIP-Chip data6.8□□□□□ -1.32not detected
SQT1YIR012W VHC1P38329 1120 aa6.8□□□□□ -1.32
SQT1YIR012W MSG5P38590 489 aa6.8□□□□□ -1.32
SQT1YIR012W INA22P40576 216 aa6.8□□□□□ -1.32
SQT1YIR012W ATG36P46983 293 aa6.8□□□□□ -1.32
SQT1YIR012W ASN1P49089 572 aaKnown RBP6.8□□□□□ -1.32
SQT1YIR012W ORC5P50874 479 aa6.8□□□□□ -1.32
SQT1YIR012W YGR125WP53273 1036 aa6.8□□□□□ -1.32
SQT1YIR012W YNL146WP53906 100 aa6.8□□□□□ -1.32
SQT1YIR012W TBF1Q02457 562 aa6.8□□□□□ -1.32
SQT1YIR012W CEF1Q03654 590 aaPredicted RBP6.8□□□□□ -1.32
SQT1YIR012W UFO1Q04511 668 aa6.8□□□□□ -1.32
SQT1YIR012W IWR1Q07532 353 aaPredicted RBP6.8□□□□□ -1.32
SQT1YIR012W ACM1Q08981 209 aa6.8□□□□□ -1.32
SQT1YIR012W GIS3Q12418 502 aa6.8□□□□□ -1.32
SQT1YIR012W CDC19P00549 500 aaKnown RBP6.79□□□□□ -1.32
SQT1YIR012W PDR1P12383 1068 aa6.79□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms