RNA–Protein interactions for RNA: YHR108W

GGA2, Transcript of Protein that regulates Arf1p, Arf2p to facilitate Golgi trafficking, yeastyeast

Gene GGA2, Length 1,758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GGA2YHR108W ADH4P10127 382 aa8.73□□□□□ -1.01
GGA2YHR108W PMS1P14242 873 aa8.73□□□□□ -1.01
GGA2YHR108W SPO16P17122 198 aa8.73□□□□□ -1.01
GGA2YHR108W CDC42P19073 191 aa8.73□□□□□ -1.01
GGA2YHR108W PRE10P21242 288 aaKnown RBP RIP-Chip data8.73□□□□□ -1.01not detected
GGA2YHR108W VMA4P22203 233 aaKnown RBP8.73□□□□□ -1.01
GGA2YHR108W RME1P32338 300 aaKnown RBP8.73□□□□□ -1.01
GGA2YHR108W YME1P32795 747 aa8.73□□□□□ -1.01
GGA2YHR108W RPC37P36121 282 aa8.73□□□□□ -1.01
GGA2YHR108W VID24P38263 362 aa8.73□□□□□ -1.01
GGA2YHR108W END3P39013 349 aa8.73□□□□□ -1.01
GGA2YHR108W PHO86P46956 311 aa8.73□□□□□ -1.01
GGA2YHR108W NMD5P46970 1048 aa8.73□□□□□ -1.01
GGA2YHR108W CPR6P53691 371 aaKnown RBP8.73□□□□□ -1.01
GGA2YHR108W JIP4Q03361 876 aa8.73□□□□□ -1.01
GGA2YHR108W HFI1Q12060 488 aa8.73□□□□□ -1.01
GGA2YHR108W TRM11Q12463 433 aa8.73□□□□□ -1.01
GGA2YHR108W COX11P19516 300 aaKnown RBP8.72□□□□□ -1.01
GGA2YHR108W RNR1P21524 888 aaKnown RBP8.72□□□□□ -1.01
GGA2YHR108W PLC1P32383 869 aa8.72□□□□□ -1.01
GGA2YHR108W GCD6P32501 712 aaKnown RBP8.72□□□□□ -1.01
GGA2YHR108W GUA1P38625 525 aaKnown RBP8.72□□□□□ -1.01
GGA2YHR108W PMC1P38929 1173 aaPredicted RBP8.72□□□□□ -1.01
GGA2YHR108W TRS130Q03660 1102 aa8.72□□□□□ -1.01
GGA2YHR108W ECM7Q06200 448 aa8.72□□□□□ -1.01
GGA2YHR108W SPT5P27692 1063 aaKnown RBP8.71□□□□□ -1.01
GGA2YHR108W CAP1P28495 268 aaKnown RBP8.71□□□□□ -1.01
GGA2YHR108W MMS4P38257 691 aa8.71□□□□□ -1.01
GGA2YHR108W ASG1P40467 964 aa8.71□□□□□ -1.01
GGA2YHR108W ATG36P46983 293 aa8.71□□□□□ -1.01
GGA2YHR108W DAS1P47005 663 aa8.71□□□□□ -1.01
GGA2YHR108W ACF4P47129 309 aa8.71□□□□□ -1.01
GGA2YHR108W YMR102CQ03177 834 aa8.71□□□□□ -1.01
GGA2YHR108W YDR278CQ05612 105 aa8.71□□□□□ -1.01
GGA2YHR108W FRA1Q07825 749 aa8.71□□□□□ -1.01
GGA2YHR108W ABP140Q08641 628 aaKnown RBP8.71□□□□□ -1.01
GGA2YHR108W TY3A-GQ12173 290 aa8.71□□□□□ -1.01
GGA2YHR108W TY3A-IQ99219 290 aa8.71□□□□□ -1.01
GGA2YHR108W ECM3Q99252 613 aa8.71□□□□□ -1.01
GGA2YHR108W RPB2P08518 1224 aaKnown RBP8.71□□□□□ -1.02
GGA2YHR108W KIN82P25341 720 aa8.71□□□□□ -1.02
GGA2YHR108W SQT1P35184 431 aa8.71□□□□□ -1.02
GGA2YHR108W OAF3P36023 863 aa8.71□□□□□ -1.02
GGA2YHR108W JJJ3P47138 172 aa8.71□□□□□ -1.02
GGA2YHR108W TPO2P53283 614 aa8.71□□□□□ -1.02
GGA2YHR108W UFO1Q04511 668 aa8.71□□□□□ -1.02
GGA2YHR108W PNP1Q05788 311 aa8.71□□□□□ -1.02
GGA2YHR108W SHS1Q07657 551 aa8.71□□□□□ -1.02
GGA2YHR108W ADE3P07245 946 aaKnown RBP8.7□□□□□ -1.02
GGA2YHR108W YER152CP10356 443 aa8.7□□□□□ -1.02
GGA2YHR108W ILV6P25605 309 aaKnown RBP8.7□□□□□ -1.02
GGA2YHR108W ABD1P32783 436 aaPredicted RBP8.7□□□□□ -1.02
GGA2YHR108W GYP6P32806 458 aa8.7□□□□□ -1.02
GGA2YHR108W SKG6P32900 734 aaPredicted RBP8.7□□□□□ -1.02
GGA2YHR108W SEG2P34250 1132 aa8.7□□□□□ -1.02
GGA2YHR108W CCL1P37366 393 aa8.7□□□□□ -1.02
GGA2YHR108W PBP2P38151 413 aaKnown RBP RIP-Chip data8.7□□□□□ -1.02not detected
GGA2YHR108W VHC1P38329 1120 aa8.7□□□□□ -1.02
GGA2YHR108W MSG5P38590 489 aa8.7□□□□□ -1.02
GGA2YHR108W SMX2P40204 77 aaKnown RBP8.7□□□□□ -1.02
GGA2YHR108W INP52P50942 1183 aa8.7□□□□□ -1.02
GGA2YHR108W IVY1Q04934 453 aa8.7□□□□□ -1.02
GGA2YHR108W YDR461C-AQ2V2P7 80 aa8.7□□□□□ -1.02
GGA2YHR108W PYC1P11154 1178 aaKnown RBP8.69□□□□□ -1.02
GGA2YHR108W POL3P15436 1097 aa8.69□□□□□ -1.02
GGA2YHR108W RRT12P25381 491 aa8.69□□□□□ -1.02
GGA2YHR108W YUR1P26725 428 aa8.69□□□□□ -1.02
GGA2YHR108W RGT1P32862 1170 aa8.69□□□□□ -1.02
GGA2YHR108W TIM23P32897 222 aa8.69□□□□□ -1.02
GGA2YHR108W BSD2P38356 321 aa8.69□□□□□ -1.02
GGA2YHR108W YMR134WP40207 237 aa8.69□□□□□ -1.02
GGA2YHR108W AIM21P40563 679 aa8.69□□□□□ -1.02
GGA2YHR108W URB2P47108 1174 aa8.69□□□□□ -1.02
GGA2YHR108W NOG2P53742 486 aaKnown RBP8.69□□□□□ -1.02
GGA2YHR108W ACM1Q08981 209 aa8.69□□□□□ -1.02
GGA2YHR108W SGT2Q12118 346 aaKnown RBP8.69□□□□□ -1.02
GGA2YHR108W PEP5P12868 1029 aa8.68□□□□□ -1.02
GGA2YHR108W KAR3P17119 729 aa8.68□□□□□ -1.02
GGA2YHR108W SFL1P20134 766 aa8.68□□□□□ -1.02
GGA2YHR108W SMY2P32909 740 aaKnown RBP8.68□□□□□ -1.02
GGA2YHR108W DSN1P40568 576 aa8.68□□□□□ -1.02
GGA2YHR108W MNP1P53163 194 aaPredicted RBP8.68□□□□□ -1.02
GGA2YHR108W USA1Q03714 838 aa8.68□□□□□ -1.02
GGA2YHR108W YOL087CQ99247 1116 aa8.68□□□□□ -1.02
GGA2YHR108W PDR1P12383 1068 aa8.68□□□□□ -1.02
GGA2YHR108W CDC10P25342 322 aaKnown RBP8.68□□□□□ -1.02
GGA2YHR108W TMT1P32643 299 aa8.68□□□□□ -1.02
GGA2YHR108W CBR1P38626 284 aaKnown RBP8.68□□□□□ -1.02
GGA2YHR108W SSP1P38871 571 aa8.68□□□□□ -1.02
GGA2YHR108W PEX21P50091 288 aa8.68□□□□□ -1.02
GGA2YHR108W YML6P51998 286 aa8.68□□□□□ -1.02
GGA2YHR108W HOP2P53187 214 aa8.68□□□□□ -1.02
GGA2YHR108W PIG1Q06216 648 aa8.68□□□□□ -1.02
GGA2YHR108W TUB3P09734 445 aaKnown RBP8.67□□□□□ -1.02
GGA2YHR108W ASP3-2P0CX77 362 aa8.67□□□□□ -1.02
GGA2YHR108W ASP3-3P0CX78 362 aa8.67□□□□□ -1.02
GGA2YHR108W ASP3-4P0CX79 362 aa8.67□□□□□ -1.02
GGA2YHR108W ASP3-1P0CZ17 362 aa8.67□□□□□ -1.02
GGA2YHR108W SCJ1P25303 377 aa8.67□□□□□ -1.02
GGA2YHR108W PUF4P25339 888 aaKnown RBP RIP-Chip data8.67□□□□□ -1.02not detected
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms